BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020211
         (1411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]   648   0.0  
ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containi...   570   e-160
emb|CBI28334.3| unnamed protein product [Vitis vinifera]              540   e-151
ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containi...   411   e-112
ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containi...   400   e-109

>emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
          Length = 1033

 Score =  648 bits (1671), Expect = 0.0
 Identities = 312/462 (67%), Positives = 381/462 (82%)
 Frame = -1

Query: 1387 LEYALSVFNQIQQPNSFIFFTLIKAFLESPSPLTSISLYSQMLYKLEFFDGLQFSLPSVL 1208
            L+YA SVF++IQ PNSFIFF LIK F ++ +P+ S+ LY++ML  L +  G++FS+PSVL
Sbjct: 57   LDYASSVFSRIQHPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVL 116

Query: 1207 KACGKTLSLNEGKQVHGQVLKTHFKNDLFVMNSLVRMYVQVGQIKLARLMFDKMTYRDLV 1028
            KACGK L+ +EG+QVHGQVLKTH   D FV NS+VRMY+  G+I+LAR +FD+M  RD+V
Sbjct: 117  KACGKLLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVV 176

Query: 1027 SWNSMLHGYVKAGEIDFAVSLFEEMPEKDLVSWNIMIDGYGKCGKCEQAEEIFERMSCRD 848
            SWNSM+ GY+KAGEI+ A  LF+EMPE+DLVS N MIDGYGKCG+CE AE++FE MS +D
Sbjct: 177  SWNSMIAGYLKAGEIELASELFDEMPERDLVSCNAMIDGYGKCGRCELAEKVFETMSDKD 236

Query: 847  VVSWTCMISGYVFNRRPKEGLDAFRKMLCSGIKPDAAAIVSVLSGIADLGFVEEGKWIHA 668
            VV+WT MIS YV NR P + LD FR+ML  G++PD  AIVSVLS IADLGFVEEGKW+HA
Sbjct: 237  VVTWTSMISAYVQNRCPMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHA 296

Query: 667  YISRNGIVLSSGVIGSALVDMYSKCGYIEDAYGVFTSFASRRSVADWNSMISGFAIHGLG 488
            Y+S N I LSSG IGSAL+DMYSKCGYIE+AY VF S + RR++ DWNSMISG AIHGL 
Sbjct: 297  YVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHGLA 356

Query: 487  HRALEVFRDMVRMEVEPNEITFIGVLTACSHGGLVQEGQFYFDLMQENYKLVPMIQHYGC 308
              AL++F +M RM++EPNEITF+G+L+ CSHGGLV+EGQFYF+ M E YK+VP IQHYGC
Sbjct: 357  REALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQHYGC 416

Query: 307  MIDLFARAGNLKEALGIIENMPVEPDTLAWKAILSACMKHGDMTVGEHAAFSTIELAPND 128
            MIDLF RAG L++ALG+I+NMP E D LAWKAILSA MKHG + +G+ AA   IELAP+D
Sbjct: 417  MIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAALRAIELAPDD 476

Query: 127  SSSYVLLSNIYAKARRWDDVAKVRLMMKERRVRKIPGCSSIL 2
            SSSYVLLSNIYAKA RWDDVAK+RLMM++R V+KI GCSS+L
Sbjct: 477  SSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSML 518


>ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
            [Vitis vinifera]
          Length = 616

 Score =  570 bits (1469), Expect = e-160
 Identities = 284/462 (61%), Positives = 349/462 (75%)
 Frame = -1

Query: 1387 LEYALSVFNQIQQPNSFIFFTLIKAFLESPSPLTSISLYSQMLYKLEFFDGLQFSLPSVL 1208
            L+YA SVF++IQ PNSFIFF LIK F ++ +P+ S+ LY++ML  L +  G++FS+PSVL
Sbjct: 57   LDYASSVFSRIQHPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVL 116

Query: 1207 KACGKTLSLNEGKQVHGQVLKTHFKNDLFVMNSLVRMYVQVGQIKLARLMFDKMTYRDLV 1028
            KACGK L+ +EG+QVHGQVLKTH   D FV NS+VRM                       
Sbjct: 117  KACGKLLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRM----------------------- 153

Query: 1027 SWNSMLHGYVKAGEIDFAVSLFEEMPEKDLVSWNIMIDGYGKCGKCEQAEEIFERMSCRD 848
                    Y+  GEI+ A  +F+ MP +D+VSWN MI GY K G+ E A+++FE MS +D
Sbjct: 154  --------YIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKAGEIELAKKVFETMSDKD 205

Query: 847  VVSWTCMISGYVFNRRPKEGLDAFRKMLCSGIKPDAAAIVSVLSGIADLGFVEEGKWIHA 668
            VV+WT MIS YV NR P + LD FR+ML  G++PD  AIVSVLS IADLGFVEEGKW+HA
Sbjct: 206  VVTWTSMISAYVQNRCPMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHA 265

Query: 667  YISRNGIVLSSGVIGSALVDMYSKCGYIEDAYGVFTSFASRRSVADWNSMISGFAIHGLG 488
            Y+S N I LSSG IGSAL+DMYSKCGYIE+AY VF S + RR++ DWNSMISG AIHGL 
Sbjct: 266  YVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHGLA 325

Query: 487  HRALEVFRDMVRMEVEPNEITFIGVLTACSHGGLVQEGQFYFDLMQENYKLVPMIQHYGC 308
              AL++F +M RM++EPNEITF+G+L+ CSHGGLV+EGQFYF+ M E YK+VP IQHYGC
Sbjct: 326  REALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQHYGC 385

Query: 307  MIDLFARAGNLKEALGIIENMPVEPDTLAWKAILSACMKHGDMTVGEHAAFSTIELAPND 128
            MIDLF RAG L++ALG+I+NMP E D LAWKAILSA MKHG + +G+ AA   IELAP+D
Sbjct: 386  MIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAALRAIELAPDD 445

Query: 127  SSSYVLLSNIYAKARRWDDVAKVRLMMKERRVRKIPGCSSIL 2
            SSSYVLLSNIYAKA RWDDVAK+RLMM++R V+KI GCSS+L
Sbjct: 446  SSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSML 487


>emb|CBI28334.3| unnamed protein product [Vitis vinifera]
          Length = 604

 Score =  540 bits (1391), Expect = e-151
 Identities = 274/462 (59%), Positives = 337/462 (72%)
 Frame = -1

Query: 1387 LEYALSVFNQIQQPNSFIFFTLIKAFLESPSPLTSISLYSQMLYKLEFFDGLQFSLPSVL 1208
            L+YA SVF++IQ PNSFIFF LIK F ++ +P+ S+ LY++ML  L +  G++FS+PSVL
Sbjct: 57   LDYASSVFSRIQHPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVL 116

Query: 1207 KACGKTLSLNEGKQVHGQVLKTHFKNDLFVMNSLVRMYVQVGQIKLARLMFDKMTYRDLV 1028
            KACGK L+ +EG+QVHGQVLKTH   D FV NS+VRM                       
Sbjct: 117  KACGKLLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRM----------------------- 153

Query: 1027 SWNSMLHGYVKAGEIDFAVSLFEEMPEKDLVSWNIMIDGYGKCGKCEQAEEIFERMSCRD 848
                    Y+  GEI+ A  +F+ MP +D+VSWN MI GY K G+ E A E+F+ M  RD
Sbjct: 154  --------YIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKAGEIELASELFDEMPERD 205

Query: 847  VVSWTCMISGYVFNRRPKEGLDAFRKMLCSGIKPDAAAIVSVLSGIADLGFVEEGKWIHA 668
            +VS   MI GY             ++ML  G++PD  AIVSVLS IADLGFVEEGKW+HA
Sbjct: 206  LVSCNAMIDGYG------------KEMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHA 253

Query: 667  YISRNGIVLSSGVIGSALVDMYSKCGYIEDAYGVFTSFASRRSVADWNSMISGFAIHGLG 488
            Y+S N I LSSG IGSAL+DMYSKCGYIE+AY VF S + RR++ DWNSMISG AIHGL 
Sbjct: 254  YVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHGLA 313

Query: 487  HRALEVFRDMVRMEVEPNEITFIGVLTACSHGGLVQEGQFYFDLMQENYKLVPMIQHYGC 308
              AL++F +M RM++EPNEITF+G+L+ CSHGGLV+EGQFYF+ M E YK+VP IQHYGC
Sbjct: 314  REALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQHYGC 373

Query: 307  MIDLFARAGNLKEALGIIENMPVEPDTLAWKAILSACMKHGDMTVGEHAAFSTIELAPND 128
            MIDLF RAG L++ALG+I+NMP E D LAWKAILSA MKHG + +G+ AA   IELAP+D
Sbjct: 374  MIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAALRAIELAPDD 433

Query: 127  SSSYVLLSNIYAKARRWDDVAKVRLMMKERRVRKIPGCSSIL 2
            SSSYVLLSNIYAKA RWDDVAK+RLMM++R V+KI GCSS+L
Sbjct: 434  SSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSML 475


>ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18840-like
            [Vitis vinifera]
          Length = 536

 Score =  411 bits (1056), Expect = e-112
 Identities = 205/466 (43%), Positives = 304/466 (65%), Gaps = 1/466 (0%)
 Frame = -1

Query: 1399 SHSQ-LEYALSVFNQIQQPNSFIFFTLIKAFLESPSPLTSISLYSQMLYKLEFFDGLQFS 1223
            SH+Q + YA S+F++I  PNS+++ T+I+A+  SP+P  +++++ QML+     D   F+
Sbjct: 53   SHAQAIPYAHSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFT 112

Query: 1222 LPSVLKACGKTLSLNEGKQVHGQVLKTHFKNDLFVMNSLVRMYVQVGQIKLARLMFDKMT 1043
                LK+CG    + EG+Q+HG VLKT   +DLF+ N+L+ +Y   G I+ AR + D+M 
Sbjct: 113  F--ALKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRML 170

Query: 1042 YRDLVSWNSMLHGYVKAGEIDFAVSLFEEMPEKDLVSWNIMIDGYGKCGKCEQAEEIFER 863
             RD+VSWN++L  Y + G ++ A  LF+EM E+++ SWN MI GY   G  E+A  +F  
Sbjct: 171  ERDVVSWNALLSAYAERGLMELACHLFDEMTERNVESWNFMISGYVGVGLLEEARRVFGE 230

Query: 862  MSCRDVVSWTCMISGYVFNRRPKEGLDAFRKMLCSGIKPDAAAIVSVLSGIADLGFVEEG 683
               ++VVSW  MI+GY    R  E L  F  M  +G+KPD   +VSVLS  A +G + +G
Sbjct: 231  TPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQG 290

Query: 682  KWIHAYISRNGIVLSSGVIGSALVDMYSKCGYIEDAYGVFTSFASRRSVADWNSMISGFA 503
            +W+HAYI +NGI +  G + +ALVDMYSKCG IE A  VF S   R+ ++ WNS+ISG +
Sbjct: 291  EWVHAYIDKNGISID-GFVATALVDMYSKCGSIEKALEVFNS-CLRKDISTWNSIISGLS 348

Query: 502  IHGLGHRALEVFRDMVRMEVEPNEITFIGVLTACSHGGLVQEGQFYFDLMQENYKLVPMI 323
             HG G  AL++F +M+    +PNE+TF+ VL+ACS  GL+ EG+  F+LM   + + P I
Sbjct: 349  THGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTI 408

Query: 322  QHYGCMIDLFARAGNLKEALGIIENMPVEPDTLAWKAILSACMKHGDMTVGEHAAFSTIE 143
            +HYGCM+DL  R G L+EA  +++ MP +  ++ W+++L AC  HG++ + E  A   +E
Sbjct: 409  EHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKLLE 468

Query: 142  LAPNDSSSYVLLSNIYAKARRWDDVAKVRLMMKERRVRKIPGCSSI 5
            L+P +SSS+V LSN+YA   RW DV +VR  M+ + VRK PGCS I
Sbjct: 469  LSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKDPGCSMI 514


>ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
            [Vitis vinifera]
          Length = 640

 Score =  400 bits (1028), Expect = e-109
 Identities = 204/466 (43%), Positives = 304/466 (65%)
 Frame = -1

Query: 1402 TSHSQLEYALSVFNQIQQPNSFIFFTLIKAFLESPSPLTSISLYSQMLYKLEFFDGLQFS 1223
            +S + L YA SVF++I  P++FI+ T+I+A+L S +P  S+SL+ QM ++ E      +S
Sbjct: 49   SSANDLLYARSVFDEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQ-ECIPIDSYS 107

Query: 1222 LPSVLKACGKTLSLNEGKQVHGQVLKTHFKNDLFVMNSLVRMYVQVGQIKLARLMFDKMT 1043
            L  V++ACG+      G+++H QVLK    +DLFV  +L+ MY + G I++AR + D+M 
Sbjct: 108  LSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMA 167

Query: 1042 YRDLVSWNSMLHGYVKAGEIDFAVSLFEEMPEKDLVSWNIMIDGYGKCGKCEQAEEIFER 863
            + DLV +N +L  YV+ GEI+ A  LF+ MPE+DLVSWN MI G+   G    A+++F+R
Sbjct: 168  HPDLVPYNVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDR 227

Query: 862  MSCRDVVSWTCMISGYVFNRRPKEGLDAFRKMLCSGIKPDAAAIVSVLSGIADLGFVEEG 683
               RD++SW+ MI+ Y   R+  E L  F +M  + + PD   +VSVLS   D+G +  G
Sbjct: 228  TCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMG 287

Query: 682  KWIHAYISRNGIVLSSGVIGSALVDMYSKCGYIEDAYGVFTSFASRRSVADWNSMISGFA 503
            K IH  I RN I +    +G++LVDMY+KCG I+++  VF    + R V  W++MI G A
Sbjct: 288  KMIHECIERNRIEIDLK-LGTSLVDMYAKCGDIDNSLRVFNGM-NNRDVFAWSAMIMGLA 345

Query: 502  IHGLGHRALEVFRDMVRMEVEPNEITFIGVLTACSHGGLVQEGQFYFDLMQENYKLVPMI 323
             HG G  AL+ F  M+  +++PN++TFIGVL+ACSH GLV EG  YF  M + Y + P I
Sbjct: 346  NHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKI 405

Query: 322  QHYGCMIDLFARAGNLKEALGIIENMPVEPDTLAWKAILSACMKHGDMTVGEHAAFSTIE 143
            +HYGC++D+  RAG L+EA+ +I++MP  PD + W+A+L AC  + ++ + E A  + +E
Sbjct: 406  EHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLE 465

Query: 142  LAPNDSSSYVLLSNIYAKARRWDDVAKVRLMMKERRVRKIPGCSSI 5
            L P+   +YVLLSNIY++A+ WD V  VR MMK   ++K+PG SSI
Sbjct: 466  LEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSI 511