BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020208
         (1546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron sp...   323   6e-86
emb|CBI33632.3| unnamed protein product [Vitis vinifera]              320   6e-85
ref|XP_002516757.1| conserved hypothetical protein [Ricinus comm...   300   5e-79
ref|XP_002329296.1| predicted protein [Populus trichocarpa] gi|2...   281   3e-73
ref|XP_003551841.1| PREDICTED: chloroplastic group IIA intron sp...   280   7e-73

>ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Vitis vinifera]
          Length = 1184

 Score =  323 bits (829), Expect = 6e-86
 Identities = 172/307 (56%), Positives = 224/307 (72%), Gaps = 12/307 (3%)
 Frame = -2

Query: 1545 EEGARLKAIESLSVTNEIVSTMSSVGTLSEFHNFQIKYGHRNNDRDKIDIQTEAEKEKLE 1366
            EE ARLKAIE+  VT++ ++  S+ GTLSEF N + ++    +   +I+++ EAEKE+LE
Sbjct: 533  EEDARLKAIETSFVTDKPLANTSTTGTLSEFQNIETEFRGLKDGNTEIEVELEAEKERLE 592

Query: 1365 KEMRKQEHKLVLLKRKIERSARELFKLNSAWRISEQDADQELITEEERNCLRKMSLKMDK 1186
            KE++KQE  L +LKRKIERSA+ L KLNSAWR ++ DAD+E+ITEEER C RK+  KMD 
Sbjct: 593  KELKKQERNLFILKRKIERSAKVLAKLNSAWRPADHDADKEMITEEERECFRKIGQKMDS 652

Query: 1185 TLVLGRRGVFDGVIGSMHQHWKHREVVKVITMQRSFSQIINTAALLEIESGGILIAVEKL 1006
            +L+LGRRGVFDGVI  +HQHWKHRE+VKVITMQRSFSQ++ TA LLE ESGG+L++++KL
Sbjct: 653  SLLLGRRGVFDGVIEGLHQHWKHREIVKVITMQRSFSQVLYTAKLLESESGGVLVSIDKL 712

Query: 1005 RSGYAIIVYRGKNYRRPLKLLPENLLTKRAALQRSLQMQRIGSLKFFAYQRQWKIANLKS 826
            + G+AII+YRGKNYRRP+KL+P+NLLTKR AL RSL+MQRIGSLKFFAYQRQ  I++LK 
Sbjct: 713  KEGHAIIIYRGKNYRRPIKLVPKNLLTKREALNRSLEMQRIGSLKFFAYQRQQAISDLKL 772

Query: 825  RLRSMPTTVMEVASGEFANS*KSCEQD-AFHQ---------HLPHVNISLRRR*PKT--Y 682
            +L  +      +   E     K    D A+H+         ++PHV + L  R  KT  Y
Sbjct: 773  KLADLQKGSRRIDQRESEKFTKHEPPDVAYHESYFQGVKRYNIPHVLLQLLLRLKKTAEY 832

Query: 681  LTRRLEE 661
            L    EE
Sbjct: 833  LLPTEEE 839


>emb|CBI33632.3| unnamed protein product [Vitis vinifera]
          Length = 529

 Score =  320 bits (820), Expect = 6e-85
 Identities = 156/245 (63%), Positives = 202/245 (82%)
 Frame = -2

Query: 1545 EEGARLKAIESLSVTNEIVSTMSSVGTLSEFHNFQIKYGHRNNDRDKIDIQTEAEKEKLE 1366
            EE ARLKAIE+  VT++ ++  S+ GTLSEF N + ++    +   +I+++ EAEKE+LE
Sbjct: 234  EEDARLKAIETSFVTDKPLANTSTTGTLSEFQNIETEFRGLKDGNTEIEVELEAEKERLE 293

Query: 1365 KEMRKQEHKLVLLKRKIERSARELFKLNSAWRISEQDADQELITEEERNCLRKMSLKMDK 1186
            KE++KQE  L +LKRKIERSA+ L KLNSAWR ++ DAD+E+ITEEER C RK+  KMD 
Sbjct: 294  KELKKQERNLFILKRKIERSAKVLAKLNSAWRPADHDADKEMITEEERECFRKIGQKMDS 353

Query: 1185 TLVLGRRGVFDGVIGSMHQHWKHREVVKVITMQRSFSQIINTAALLEIESGGILIAVEKL 1006
            +L+LGRRGVFDGVI  +HQHWKHRE+VKVITMQRSFSQ++ TA LLE ESGG+L++++KL
Sbjct: 354  SLLLGRRGVFDGVIEGLHQHWKHREIVKVITMQRSFSQVLYTAKLLESESGGVLVSIDKL 413

Query: 1005 RSGYAIIVYRGKNYRRPLKLLPENLLTKRAALQRSLQMQRIGSLKFFAYQRQWKIANLKS 826
            + G+AII+YRGKNYRRP+KL+P+NLLTKR AL RSL+MQRIGSLKFFAYQRQ  I++LK 
Sbjct: 414  KEGHAIIIYRGKNYRRPIKLVPKNLLTKREALNRSLEMQRIGSLKFFAYQRQQAISDLKL 473

Query: 825  RLRSM 811
            +L  +
Sbjct: 474  KLADL 478


>ref|XP_002516757.1| conserved hypothetical protein [Ricinus communis]
            gi|223544130|gb|EEF45655.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 742

 Score =  300 bits (769), Expect = 5e-79
 Identities = 152/245 (62%), Positives = 193/245 (78%)
 Frame = -2

Query: 1545 EEGARLKAIESLSVTNEIVSTMSSVGTLSEFHNFQIKYGHRNNDRDKIDIQTEAEKEKLE 1366
            EEGARLKAIE+    +E+V   + +GTL+EF + Q+++           +Q EAEKEKLE
Sbjct: 492  EEGARLKAIETSFTDDELVVKATKIGTLNEFQDIQVRFKELAKGYRDSKLQLEAEKEKLE 551

Query: 1365 KEMRKQEHKLVLLKRKIERSARELFKLNSAWRISEQDADQELITEEERNCLRKMSLKMDK 1186
            +E+R QEHKL++LK KIE+SAREL KLNSAW  ++QDAD E++TEEER CLRK+ LKM  
Sbjct: 552  RELRIQEHKLLILKSKIEKSARELSKLNSAWAPADQDADLEMMTEEERECLRKIGLKMRS 611

Query: 1185 TLVLGRRGVFDGVIGSMHQHWKHREVVKVITMQRSFSQIINTAALLEIESGGILIAVEKL 1006
            +L+LGRRGVFDGVI  +HQHWKHREVVKVI++QR F+Q+I TA  LE E+GGIL++++KL
Sbjct: 612  SLLLGRRGVFDGVIEGLHQHWKHREVVKVISLQRMFAQVIRTAKFLEAETGGILVSIDKL 671

Query: 1005 RSGYAIIVYRGKNYRRPLKLLPENLLTKRAALQRSLQMQRIGSLKFFAYQRQWKIANLKS 826
            + G+AII+YRGKNYRRP +LL  NLLTKR AL RSL+MQRIGSL+FFAYQRQ  I  LK 
Sbjct: 672  KEGHAIIIYRGKNYRRPQRLL-NNLLTKRKALCRSLEMQRIGSLRFFAYQRQHSIRELKF 730

Query: 825  RLRSM 811
            +L  +
Sbjct: 731  QLAQL 735


>ref|XP_002329296.1| predicted protein [Populus trichocarpa] gi|222870750|gb|EEF07881.1|
            predicted protein [Populus trichocarpa]
          Length = 687

 Score =  281 bits (719), Expect = 3e-73
 Identities = 147/242 (60%), Positives = 191/242 (78%)
 Frame = -2

Query: 1545 EEGARLKAIESLSVTNEIVSTMSSVGTLSEFHNFQIKYGHRNNDRDKIDIQTEAEKEKLE 1366
            EEGAR+KAIE+  +     +T S  GTL EF  FQIK+  +   +   +IQ EA KEKLE
Sbjct: 429  EEGARMKAIETSYMPGGPTNT-SRCGTLYEFQEFQIKF--QKTAKGDSEIQLEAYKEKLE 485

Query: 1365 KEMRKQEHKLVLLKRKIERSARELFKLNSAWRISEQDADQELITEEERNCLRKMSLKMDK 1186
            +E+R QE++L +LK KIE+ A++L KLNSAW  S +DADQ ++TEEER C RK+ LK+  
Sbjct: 486  RELRNQEYRLRILKSKIEKPAKDLSKLNSAWVPSPRDADQGIMTEEERECFRKIGLKLRG 545

Query: 1185 TLVLGRRGVFDGVIGSMHQHWKHREVVKVITMQRSFSQIINTAALLEIESGGILIAVEKL 1006
            +LVLGRRGVF+GV+  +HQHWKHREVVKVITMQR FSQ+I+TA LLE ES GIL++V+KL
Sbjct: 546  SLVLGRRGVFEGVMEGLHQHWKHREVVKVITMQRVFSQVIHTATLLEAESDGILVSVDKL 605

Query: 1005 RSGYAIIVYRGKNYRRPLKLLPENLLTKRAALQRSLQMQRIGSLKFFAYQRQWKIANLKS 826
            + G+AII+YRGKNY+RPL+LL +NLLTKR AL+RSL +QR+GSLK+FA QR+  I++LK 
Sbjct: 606  KEGHAIIIYRGKNYKRPLRLLKKNLLTKREALKRSLLIQRVGSLKYFANQRERVISDLKL 665

Query: 825  RL 820
            +L
Sbjct: 666  KL 667


>ref|XP_003551841.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Glycine max]
          Length = 712

 Score =  280 bits (716), Expect = 7e-73
 Identities = 143/259 (55%), Positives = 193/259 (74%)
 Frame = -2

Query: 1545 EEGARLKAIESLSVTNEIVSTMSSVGTLSEFHNFQIKYGHRNNDRDKIDIQTEAEKEKLE 1366
            EE AR+KAI++ S  +E+    S+ GTL+EF   Q K     +     +IQ EAE  +LE
Sbjct: 455  EEVARMKAIQAFSPIDEVPLDTSTSGTLTEFRKIQTKLEDTKSVNVDSNIQLEAEICRLE 514

Query: 1365 KEMRKQEHKLVLLKRKIERSARELFKLNSAWRISEQDADQELITEEERNCLRKMSLKMDK 1186
            KE+++++ +  +L +KI+RS REL KLN+AW  SEQD D E++T+EER C RK+ LKM  
Sbjct: 515  KELKEEQRRAFILNKKIKRSERELSKLNAAWTPSEQDTDLEIMTDEERECFRKIGLKMQS 574

Query: 1185 TLVLGRRGVFDGVIGSMHQHWKHREVVKVITMQRSFSQIINTAALLEIESGGILIAVEKL 1006
            +L+LGRRG+FDGV+  +HQHWKHREVVKVITMQ+ FSQ+INTA +LE ESGGIL++V+KL
Sbjct: 575  SLLLGRRGIFDGVLEGLHQHWKHREVVKVITMQKLFSQVINTAKVLETESGGILVSVDKL 634

Query: 1005 RSGYAIIVYRGKNYRRPLKLLPENLLTKRAALQRSLQMQRIGSLKFFAYQRQWKIANLKS 826
            + G+AII+YRGKNY+RP   L +NLLTKR AL+RSL+MQRIGS+KFFA+QR+  I+ L+ 
Sbjct: 635  KEGHAIIIYRGKNYKRPSIKLAKNLLTKREALRRSLEMQRIGSMKFFAHQREQAISELEV 694

Query: 825  RLRSMPTTVMEVASGEFAN 769
            +L  +     E+   EFAN
Sbjct: 695  KLADLQQK-KEIELREFAN 712