BLASTX nr result

ID: Coptis25_contig00020198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020198
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25963.1| unknown [Picea sitchensis]                             147   2e-33
ref|XP_002316393.1| predicted protein [Populus trichocarpa] gi|2...   144   2e-32
ref|XP_003633469.1| PREDICTED: uncharacterized protein LOC100854...   141   9e-32
emb|CBI31396.3| unnamed protein product [Vitis vinifera]              141   9e-32
ref|XP_002311069.1| predicted protein [Populus trichocarpa] gi|2...   139   5e-31

>gb|ABK25963.1| unknown [Picea sitchensis]
          Length = 212

 Score =  147 bits (370), Expect = 2e-33
 Identities = 65/116 (56%), Positives = 87/116 (75%), Gaps = 3/116 (2%)
 Frame = +2

Query: 41  SFSPVTMENNVSNSHPQEKKPSAPSTFIGEEKRFNE---NVPTFVNQAAIAWHEKRREWV 211
           S SP  MENNVSNSH   + PS  ST   EE +      N  TFVN A I W+E+RREW+
Sbjct: 97  SSSPEDMENNVSNSHSMRRNPSVGSTSQAEETQLTNDSTNSTTFVNHALIMWNERRREWL 156

Query: 212 GDQSQKQQTVPKDPVISWSMTYEDLLSTSEPFSQPIPLPEMVDFLVDIWHDEGLFD 379
           G++SQ Q  +P++P+ISW+ TY+DLL+T++PF QP+PLPEM+DFLVD+WH+EGL++
Sbjct: 157 GNRSQNQPQMPREPIISWNTTYDDLLATNQPFPQPVPLPEMIDFLVDVWHEEGLYE 212


>ref|XP_002316393.1| predicted protein [Populus trichocarpa] gi|222865433|gb|EEF02564.1|
           predicted protein [Populus trichocarpa]
          Length = 110

 Score =  144 bits (362), Expect = 2e-32
 Identities = 70/110 (63%), Positives = 78/110 (70%), Gaps = 3/110 (2%)
 Frame = +2

Query: 59  MENNVSNSHPQEKKPSAPSTFIGEEKRFNE---NVPTFVNQAAIAWHEKRREWVGDQSQK 229
           ME N   SH  EK+P   ST    E    E   +   F+N AAIAWHE RR+W GDQSQ+
Sbjct: 1   MEVNPVRSHSNEKQPLEHSTSTNGEHEHTEKEKSASVFINHAAIAWHESRRKWTGDQSQQ 60

Query: 230 QQTVPKDPVISWSMTYEDLLSTSEPFSQPIPLPEMVDFLVDIWHDEGLFD 379
            Q + KDP+ISWS TYEDLLST EPF +PIPLPEMVDFLVDIWHDEGLFD
Sbjct: 61  PQRMIKDPIISWSTTYEDLLSTHEPFPEPIPLPEMVDFLVDIWHDEGLFD 110


>ref|XP_003633469.1| PREDICTED: uncharacterized protein LOC100854399 [Vitis vinifera]
          Length = 111

 Score =  141 bits (356), Expect = 9e-32
 Identities = 69/107 (64%), Positives = 79/107 (73%), Gaps = 1/107 (0%)
 Frame = +2

Query: 62  ENNVSNSHPQEKKPSAPSTFIGEEKRFNE-NVPTFVNQAAIAWHEKRREWVGDQSQKQQT 238
           E N   SH  EK+    S    E+K   E +   F+N AAIAWH++RREWVGDQSQK Q 
Sbjct: 5   EVNTGGSHSNEKQTLECSASANEQKEPMEVSTFVFINHAAIAWHDRRREWVGDQSQKSQR 64

Query: 239 VPKDPVISWSMTYEDLLSTSEPFSQPIPLPEMVDFLVDIWHDEGLFD 379
             KDP+ISWSMTYEDLLST+EPFS+PIPL EMVDFLVDIW DEGL+D
Sbjct: 65  KQKDPIISWSMTYEDLLSTNEPFSEPIPLTEMVDFLVDIWQDEGLYD 111


>emb|CBI31396.3| unnamed protein product [Vitis vinifera]
          Length = 109

 Score =  141 bits (356), Expect = 9e-32
 Identities = 69/107 (64%), Positives = 79/107 (73%), Gaps = 1/107 (0%)
 Frame = +2

Query: 62  ENNVSNSHPQEKKPSAPSTFIGEEKRFNE-NVPTFVNQAAIAWHEKRREWVGDQSQKQQT 238
           E N   SH  EK+    S    E+K   E +   F+N AAIAWH++RREWVGDQSQK Q 
Sbjct: 3   EVNTGGSHSNEKQTLECSASANEQKEPMEVSTFVFINHAAIAWHDRRREWVGDQSQKSQR 62

Query: 239 VPKDPVISWSMTYEDLLSTSEPFSQPIPLPEMVDFLVDIWHDEGLFD 379
             KDP+ISWSMTYEDLLST+EPFS+PIPL EMVDFLVDIW DEGL+D
Sbjct: 63  KQKDPIISWSMTYEDLLSTNEPFSEPIPLTEMVDFLVDIWQDEGLYD 109


>ref|XP_002311069.1| predicted protein [Populus trichocarpa] gi|222850889|gb|EEE88436.1|
           predicted protein [Populus trichocarpa]
          Length = 110

 Score =  139 bits (350), Expect = 5e-31
 Identities = 69/110 (62%), Positives = 78/110 (70%), Gaps = 3/110 (2%)
 Frame = +2

Query: 59  MENNVSNSHPQEKKPSAPSTFIGEEKRFNE---NVPTFVNQAAIAWHEKRREWVGDQSQK 229
           ME N  +SH  EK+ S  ST    E    E   +   FVN AAIAWHE RR+W G+QS++
Sbjct: 1   MEVNSVSSHSNEKRSSEHSTSTNGEHMNTEKEKSTSVFVNHAAIAWHESRRKWTGNQSRQ 60

Query: 230 QQTVPKDPVISWSMTYEDLLSTSEPFSQPIPLPEMVDFLVDIWHDEGLFD 379
            Q   KDP+ISWS TYEDLLST EPFS+PIPL EMVDFLVDIWHDEGLFD
Sbjct: 61  PQRTTKDPIISWSTTYEDLLSTQEPFSEPIPLSEMVDFLVDIWHDEGLFD 110


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