BLASTX nr result
ID: Coptis25_contig00020191
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00020191
(662 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003517606.1| PREDICTED: presequence protease 2, chloropla... 54 2e-09
ref|XP_002330286.1| predicted protein [Populus trichocarpa] gi|2... 54 2e-09
ref|XP_002452870.1| hypothetical protein SORBIDRAFT_04g033980 [S... 52 3e-09
ref|XP_002313107.1| predicted protein [Populus trichocarpa] gi|2... 53 4e-09
ref|XP_002518787.1| zinc metalloprotease, putative [Ricinus comm... 53 5e-09
>ref|XP_003517606.1| PREDICTED: presequence protease 2, chloroplastic/mitochondrial-like
[Glycine max]
Length = 1078
Score = 53.5 bits (127), Expect(3) = 2e-09
Identities = 28/74 (37%), Positives = 41/74 (55%)
Frame = +1
Query: 67 SALVISRHLKDAWLLKNVRSIGGAYGVTCXXXXXXXXXXXXXXXDPILIRMLDVFYGSLS 246
SA VIS+++ + WL VR GGAYG C DP L++ LDV+ G+
Sbjct: 913 SAYVISKYISNTWLWDRVRVSGGAYGGFCDFDTHSGVFSFLSYRDPNLLKTLDVYDGTGD 972
Query: 247 FLLKNEVDADSLTE 288
FL + ++D D+LT+
Sbjct: 973 FLRELQIDDDTLTK 986
Score = 28.9 bits (63), Expect(3) = 2e-09
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 312 GFGSFRRHLLGFTGDDQAKTRKVILSTRSK 401
G+ S R+LLG T +++ + R+ ILST K
Sbjct: 1005 GYSSMLRYLLGITEEERQRRREEILSTSLK 1034
Score = 24.6 bits (52), Expect(3) = 2e-09
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2
Query: 23 GKSGNIYETEYRFN 64
GK+ NIY+T YR N
Sbjct: 898 GKAANIYDTGYRLN 911
>ref|XP_002330286.1| predicted protein [Populus trichocarpa] gi|222871321|gb|EEF08452.1|
predicted protein [Populus trichocarpa]
Length = 1007
Score = 53.5 bits (127), Expect(3) = 2e-09
Identities = 29/74 (39%), Positives = 41/74 (55%)
Frame = +1
Query: 67 SALVISRHLKDAWLLKNVRSIGGAYGVTCXXXXXXXXXXXXXXXDPILIRMLDVFYGSLS 246
SA VIS+++ + WL VR GGAYG C DP L++ LDV+ GS +
Sbjct: 842 SAYVISKYISNTWLWDRVRVSGGAYGGFCDFDTHSGVFSFLSYRDPNLLKTLDVYDGSGA 901
Query: 247 FLLKNEVDADSLTE 288
FL + E+D D+L +
Sbjct: 902 FLRELEMDDDTLAK 915
Score = 30.0 bits (66), Expect(3) = 2e-09
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 312 GFGSFRRHLLGFTGDDQAKTRKVILSTRSK 401
G+ S R+LLG T +++ K R+ ILST K
Sbjct: 934 GYSSLLRYLLGITEEERQKRREEILSTSLK 963
Score = 23.1 bits (48), Expect(3) = 2e-09
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2
Query: 23 GKSGNIYETEYRFN 64
GK+ NIY+T Y+ N
Sbjct: 827 GKAANIYDTGYQLN 840
>ref|XP_002452870.1| hypothetical protein SORBIDRAFT_04g033980 [Sorghum bicolor]
gi|241932701|gb|EES05846.1| hypothetical protein
SORBIDRAFT_04g033980 [Sorghum bicolor]
Length = 1125
Score = 52.4 bits (124), Expect(3) = 3e-09
Identities = 28/74 (37%), Positives = 40/74 (54%)
Frame = +1
Query: 67 SALVISRHLKDAWLLKNVRSIGGAYGVTCXXXXXXXXXXXXXXXDPILIRMLDVFYGSLS 246
SA VIS+H+ + WL VR GGAYG C DP L++ L+V+ +
Sbjct: 960 SAYVISKHISNTWLWDRVRVSGGAYGGFCDFDNHSGVFSYLSYRDPNLLKTLEVYDETAR 1019
Query: 247 FLLKNEVDADSLTE 288
FL + E+D D+LT+
Sbjct: 1020 FLRELEMDDDALTK 1033
Score = 29.3 bits (64), Expect(3) = 3e-09
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 312 GFGSFRRHLLGFTGDDQAKTRKVILSTRSK 401
G+ S R+LLG T +++ + R+ ILST K
Sbjct: 1052 GYSSLMRYLLGITDEERQQRREEILSTSLK 1081
Score = 24.6 bits (52), Expect(3) = 3e-09
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 23 GKSGNIYETEYRFN 64
GK+GN+Y+T Y+ N
Sbjct: 945 GKAGNLYQTGYQLN 958
>ref|XP_002313107.1| predicted protein [Populus trichocarpa] gi|222849515|gb|EEE87062.1|
predicted protein [Populus trichocarpa]
Length = 1006
Score = 52.8 bits (125), Expect(3) = 4e-09
Identities = 28/74 (37%), Positives = 42/74 (56%)
Frame = +1
Query: 67 SALVISRHLKDAWLLKNVRSIGGAYGVTCXXXXXXXXXXXXXXXDPILIRMLDVFYGSLS 246
SA VIS+++ + WL VR GGAYG C DP L++ LDV+ G+ +
Sbjct: 841 SAYVISKYISNTWLWDRVRVSGGAYGGFCDLDTHSGVFSFLSYRDPNLLKTLDVYDGTGA 900
Query: 247 FLLKNEVDADSLTE 288
FL + E+D D+L++
Sbjct: 901 FLRQLEMDDDTLSK 914
Score = 30.0 bits (66), Expect(3) = 4e-09
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 312 GFGSFRRHLLGFTGDDQAKTRKVILSTRSK 401
G+ S R+LLG T +++ K R+ ILST K
Sbjct: 933 GYSSLLRYLLGITEEERQKRREEILSTSLK 962
Score = 23.1 bits (48), Expect(3) = 4e-09
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2
Query: 23 GKSGNIYETEYRFN 64
GK+ NIY+T Y+ N
Sbjct: 826 GKAANIYDTGYQLN 839
>ref|XP_002518787.1| zinc metalloprotease, putative [Ricinus communis]
gi|223542168|gb|EEF43712.1| zinc metalloprotease,
putative [Ricinus communis]
Length = 774
Score = 53.1 bits (126), Expect(3) = 5e-09
Identities = 29/74 (39%), Positives = 40/74 (54%)
Frame = +1
Query: 67 SALVISRHLKDAWLLKNVRSIGGAYGVTCXXXXXXXXXXXXXXXDPILIRMLDVFYGSLS 246
SA VIS+++ + WL VR GGAYG C DP L++ LDV+ G+
Sbjct: 609 SAYVISKYISNTWLWDRVRVSGGAYGGFCDFDTHSGVFSFLSYRDPNLLKTLDVYDGTGD 668
Query: 247 FLLKNEVDADSLTE 288
FL E+D D+LT+
Sbjct: 669 FLRDIEMDDDTLTK 682
Score = 30.0 bits (66), Expect(3) = 5e-09
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 312 GFGSFRRHLLGFTGDDQAKTRKVILSTRSK 401
G+ S R+LLG T D++ + R+ ILST K
Sbjct: 701 GYSSLLRYLLGVTEDERQRRREEILSTSLK 730
Score = 22.3 bits (46), Expect(3) = 5e-09
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +2
Query: 23 GKSGNIYETEYRFN 64
GK+ N+Y+T Y+ N
Sbjct: 594 GKAANLYDTGYQLN 607