BLASTX nr result

ID: Coptis25_contig00020182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020182
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283458.2| PREDICTED: vacuolar amino acid transporter 1...    67   8e-20
ref|XP_003633854.1| PREDICTED: vacuolar amino acid transporter 1...    67   2e-19
ref|XP_002531860.1| amino acid transporter, putative [Ricinus co...    60   4e-18
emb|CAN80117.1| hypothetical protein VITISV_032529 [Vitis vinifera]    67   6e-18
ref|XP_004167172.1| PREDICTED: vacuolar amino acid transporter 1...    61   1e-17

>ref|XP_002283458.2| PREDICTED: vacuolar amino acid transporter 1-like [Vitis vinifera]
           gi|296082903|emb|CBI22204.3| unnamed protein product
           [Vitis vinifera]
          Length = 428

 Score = 67.4 bits (163), Expect(3) = 8e-20
 Identities = 32/49 (65%), Positives = 40/49 (81%)
 Frame = +1

Query: 154 PDIEGHAFGRIMRVVLSIFMHLQLYFVSTGFLILE*DNLHNLFPEIRFE 300
           PDI   AFG+  R+++SIFM+L+LY V+TGFLILE DNLHNLFP + FE
Sbjct: 104 PDIGEQAFGKKGRLMVSIFMYLELYLVATGFLILEGDNLHNLFPMVGFE 152



 Score = 48.1 bits (113), Expect(3) = 8e-20
 Identities = 23/51 (45%), Positives = 32/51 (62%)
 Frame = +2

Query: 2   LGIISLPYAXXXXXXXXXXXXXXFFTIAASTFFTGMLIQRCMDLDTRIKTY 154
           +GI+S+PYA               F IA +TF+TG+L+QRCMD+D  I+TY
Sbjct: 56  IGILSVPYALASGGWLSLML---LFVIALATFYTGLLLQRCMDVDLNIRTY 103



 Score = 26.2 bits (56), Expect(3) = 8e-20
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +3

Query: 324 RVGFVIIVTLIIFPSMLLRDLSKLSYL 404
           R  F++I  L+I PS+   +L+ LSY+
Sbjct: 161 RQSFILISGLVILPSVCFYNLNMLSYI 187


>ref|XP_003633854.1| PREDICTED: vacuolar amino acid transporter 1-like [Vitis vinifera]
          Length = 429

 Score = 67.4 bits (163), Expect(3) = 2e-19
 Identities = 32/49 (65%), Positives = 40/49 (81%)
 Frame = +1

Query: 154 PDIEGHAFGRIMRVVLSIFMHLQLYFVSTGFLILE*DNLHNLFPEIRFE 300
           PDI   AFG+  R+++SIFM+L+LY V+TGFLILE DNLHNLFP + FE
Sbjct: 104 PDIGEQAFGKKGRLMVSIFMYLELYLVATGFLILEGDNLHNLFPMVGFE 152



 Score = 46.6 bits (109), Expect(3) = 2e-19
 Identities = 22/51 (43%), Positives = 31/51 (60%)
 Frame = +2

Query: 2   LGIISLPYAXXXXXXXXXXXXXXFFTIAASTFFTGMLIQRCMDLDTRIKTY 154
           +GI+S+PYA               F I  +TF+TG+L+QRCMD+D  I+TY
Sbjct: 56  IGILSVPYALASGGWLSLML---LFVITLATFYTGLLLQRCMDVDLNIRTY 103



 Score = 26.2 bits (56), Expect(3) = 2e-19
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +3

Query: 324 RVGFVIIVTLIIFPSMLLRDLSKLSYL 404
           R  F++I  L+I PS+   +L+ LSY+
Sbjct: 161 RQSFILISGLVILPSVCFYNLNMLSYI 187


>ref|XP_002531860.1| amino acid transporter, putative [Ricinus communis]
           gi|223528510|gb|EEF30538.1| amino acid transporter,
           putative [Ricinus communis]
          Length = 404

 Score = 60.1 bits (144), Expect(3) = 4e-18
 Identities = 29/55 (52%), Positives = 39/55 (70%)
 Frame = +1

Query: 154 PDIEGHAFGRIMRVVLSIFMHLQLYFVSTGFLILE*DNLHNLFPEIRFEYSWINV 318
           PDI   AFG   R ++SIFM+++LY V+TGFLILE DNL NLFP +  E +  ++
Sbjct: 103 PDIGERAFGSKGRGLISIFMYVELYLVATGFLILEGDNLQNLFPNVDIEVAGFHI 157



 Score = 47.0 bits (110), Expect(3) = 4e-18
 Identities = 23/51 (45%), Positives = 33/51 (64%)
 Frame = +2

Query: 2   LGIISLPYAXXXXXXXXXXXXXXFFTIAASTFFTGMLIQRCMDLDTRIKTY 154
           +GI+S PYA               FTIA STF++G+LI+RCM++D+ I+TY
Sbjct: 55  VGILSTPYAVASGGWLSLIF---LFTIAISTFYSGLLIKRCMEVDSNIRTY 102



 Score = 28.9 bits (63), Expect(3) = 4e-18
 Identities = 14/24 (58%), Positives = 19/24 (79%)
 Frame = +3

Query: 333 FVIIVTLIIFPSMLLRDLSKLSYL 404
           FVI+V LII P++ L +LS LSY+
Sbjct: 163 FVILVALIILPTIWLDNLSILSYV 186


>emb|CAN80117.1| hypothetical protein VITISV_032529 [Vitis vinifera]
          Length = 302

 Score = 67.4 bits (163), Expect(2) = 6e-18
 Identities = 32/49 (65%), Positives = 40/49 (81%)
 Frame = +1

Query: 154 PDIEGHAFGRIMRVVLSIFMHLQLYFVSTGFLILE*DNLHNLFPEIRFE 300
           PDI   AFG+  R+++SIFM+L+LY V+TGFLILE DNLHNLFP + FE
Sbjct: 104 PDIGEQAFGKKGRLMVSIFMYLELYLVATGFLILEGDNLHNLFPMVGFE 152



 Score = 48.1 bits (113), Expect(2) = 6e-18
 Identities = 23/51 (45%), Positives = 32/51 (62%)
 Frame = +2

Query: 2   LGIISLPYAXXXXXXXXXXXXXXFFTIAASTFFTGMLIQRCMDLDTRIKTY 154
           +GI+S+PYA               F IA +TF+TG+L+QRCMD+D  I+TY
Sbjct: 56  IGILSVPYALASGGWLSLML---LFVIALATFYTGLLLQRCMDVDLNIRTY 103


>ref|XP_004167172.1| PREDICTED: vacuolar amino acid transporter 1-like [Cucumis sativus]
          Length = 436

 Score = 60.8 bits (146), Expect(3) = 1e-17
 Identities = 26/49 (53%), Positives = 40/49 (81%)
 Frame = +1

Query: 154 PDIEGHAFGRIMRVVLSIFMHLQLYFVSTGFLILE*DNLHNLFPEIRFE 300
           P++   AFG   ++V+S+FM+++LY V+TGFLILE DNL+N+FP++ FE
Sbjct: 110 PEVGELAFGNNGKIVVSVFMYVELYLVATGFLILEGDNLNNMFPDVGFE 158



 Score = 45.1 bits (105), Expect(3) = 1e-17
 Identities = 23/51 (45%), Positives = 31/51 (60%)
 Frame = +2

Query: 2   LGIISLPYAXXXXXXXXXXXXXXFFTIAASTFFTGMLIQRCMDLDTRIKTY 154
           +GI+S+PYA               F IA +TF+TG+LIQRCMD  + I+TY
Sbjct: 62  VGILSVPYALASGGWLSLIL---LFVIALATFYTGLLIQRCMDAKSDIRTY 109



 Score = 28.5 bits (62), Expect(3) = 1e-17
 Identities = 13/24 (54%), Positives = 19/24 (79%)
 Frame = +3

Query: 333 FVIIVTLIIFPSMLLRDLSKLSYL 404
           FV++V LII PS+ L +LS LS++
Sbjct: 170 FVLVVALIILPSVWLDNLSLLSFV 193


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