BLASTX nr result

ID: Coptis25_contig00020161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020161
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264943.1| PREDICTED: uncharacterized aarF domain-conta...    68   7e-10
emb|CBI29334.3| unnamed protein product [Vitis vinifera]               68   9e-10
ref|XP_002527120.1| Protein ABC1, mitochondrial precursor, putat...    66   3e-09
ref|XP_002300887.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002888848.1| ABC1 family protein [Arabidopsis lyrata subs...    63   3e-08

>ref|XP_002264943.1| PREDICTED: uncharacterized aarF domain-containing protein kinase
           At1g71810, chloroplastic-like [Vitis vinifera]
          Length = 713

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 39/64 (60%), Positives = 46/64 (71%)
 Frame = -3

Query: 306 VKDISREASPTEIQLASVQELIPIFSTITEVPPESQEXXXXLPADLAGRLVSRAAARTIR 127
           VKD S E S    QLASVQE++PI S I E+PPE Q+    LP++LAGRL+SR AARTIR
Sbjct: 651 VKD-SEEVSLAFYQLASVQEILPILSIIPELPPELQQQLLLLPSNLAGRLMSRVAARTIR 709

Query: 126 NFFL 115
             FL
Sbjct: 710 RIFL 713


>emb|CBI29334.3| unnamed protein product [Vitis vinifera]
          Length = 714

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 38/64 (59%), Positives = 46/64 (71%)
 Frame = -3

Query: 306 VKDISREASPTEIQLASVQELIPIFSTITEVPPESQEXXXXLPADLAGRLVSRAAARTIR 127
           +KD S E S    QLASVQE++PI S I E+PPE Q+    LP++LAGRL+SR AARTIR
Sbjct: 652 IKD-SEEVSLAFYQLASVQEILPILSIIPELPPELQQQLLLLPSNLAGRLMSRVAARTIR 710

Query: 126 NFFL 115
             FL
Sbjct: 711 RIFL 714


>ref|XP_002527120.1| Protein ABC1, mitochondrial precursor, putative [Ricinus communis]
           gi|223533543|gb|EEF35283.1| Protein ABC1, mitochondrial
           precursor, putative [Ricinus communis]
          Length = 711

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/58 (58%), Positives = 41/58 (70%)
 Frame = -3

Query: 288 EASPTEIQLASVQELIPIFSTITEVPPESQEXXXXLPADLAGRLVSRAAARTIRNFFL 115
           EA P   QL+SVQE++P  S I E+P E Q+    +P DLAGRLVSRAAART+R  FL
Sbjct: 654 EALPIFYQLSSVQEILPFLSVIPELPLELQQQLLLMPGDLAGRLVSRAAARTVRRMFL 711


>ref|XP_002300887.1| predicted protein [Populus trichocarpa] gi|222842613|gb|EEE80160.1|
           predicted protein [Populus trichocarpa]
          Length = 704

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/60 (56%), Positives = 40/60 (66%)
 Frame = -3

Query: 294 SREASPTEIQLASVQELIPIFSTITEVPPESQEXXXXLPADLAGRLVSRAAARTIRNFFL 115
           S EAS    Q  S +E++PI S I E+PPE Q+    LPADLAGRL+SR  ARTIR  FL
Sbjct: 645 SEEASLIFYQFPSAEEILPILSVIPELPPELQQQLLLLPADLAGRLISRVTARTIRRVFL 704


>ref|XP_002888848.1| ABC1 family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297334689|gb|EFH65107.1| ABC1 family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 692

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/58 (58%), Positives = 39/58 (67%)
 Frame = -3

Query: 288 EASPTEIQLASVQELIPIFSTITEVPPESQEXXXXLPADLAGRLVSRAAARTIRNFFL 115
           EAS    QL S QE++PI S + E+P ESQ+    LP DL GRLVSRA ARTIR  FL
Sbjct: 635 EASLVMYQLPSAQEMLPILSILPELPQESQQRLLQLPGDLVGRLVSRAFARTIRRMFL 692


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