BLASTX nr result

ID: Coptis25_contig00020159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020159
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630258.1| Cysteine desulfurase [Medicago truncatula] g...   148   5e-34
ref|XP_002310507.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-33
ref|XP_002328318.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33
ref|XP_002335110.1| predicted protein [Populus trichocarpa] gi|2...   144   7e-33
ref|XP_002517249.1| cysteine desulfurylase, putative [Ricinus co...   143   2e-32

>ref|XP_003630258.1| Cysteine desulfurase [Medicago truncatula]
           gi|355524280|gb|AET04734.1| Cysteine desulfurase
           [Medicago truncatula]
          Length = 645

 Score =  148 bits (373), Expect = 5e-34
 Identities = 71/123 (57%), Positives = 94/123 (76%)
 Frame = +3

Query: 81  ETHQQVVTTYDFNLGVVCFKMQKGGIDLQSELSIHEKCSWLQSQQIGNYIEFDTPFGKRR 260
           +T+ ++ T++DF      FK +   +DL    S+ EK  WL+SQ IGNY +FD+PFG+R+
Sbjct: 32  KTNNKLETSHDFCYHPESFK-KLVEMDLPCNESVEEKLCWLRSQIIGNYAKFDSPFGRRK 90

Query: 261 LTYADHTASGRSLLHIESFIVENVLPFYGNTHTDDSFVGQRTTKMVHEATKYIKKCLGGA 440
           L YADHTASGRSL + E FI+ ++LPFYGNTHT DS+VG RTTKM+HEAT+YIKKCLGG 
Sbjct: 91  LVYADHTASGRSLRYNEDFIINHLLPFYGNTHTCDSYVGSRTTKMLHEATEYIKKCLGGG 150

Query: 441 QED 449
           ++D
Sbjct: 151 EDD 153


>ref|XP_002310507.1| predicted protein [Populus trichocarpa] gi|222853410|gb|EEE90957.1|
           predicted protein [Populus trichocarpa]
          Length = 488

 Score =  146 bits (369), Expect = 2e-33
 Identities = 67/88 (76%), Positives = 77/88 (87%)
 Frame = +3

Query: 186 EKCSWLQSQQIGNYIEFDTPFGKRRLTYADHTASGRSLLHIESFIVENVLPFYGNTHTDD 365
           +K +WL+SQ +GN IEFD+PFGKRRLTYADHTASGRSL +IE+FI+ NVLPFYGNTHT D
Sbjct: 1   KKLAWLRSQIVGNDIEFDSPFGKRRLTYADHTASGRSLRYIENFIINNVLPFYGNTHTSD 60

Query: 366 SFVGQRTTKMVHEATKYIKKCLGGAQED 449
           S VG RTTKM+HEA +YIKKCLGG Q D
Sbjct: 61  SHVGHRTTKMLHEAAEYIKKCLGGGQND 88


>ref|XP_002328318.1| predicted protein [Populus trichocarpa] gi|222838033|gb|EEE76398.1|
           predicted protein [Populus trichocarpa]
          Length = 491

 Score =  145 bits (367), Expect = 3e-33
 Identities = 65/88 (73%), Positives = 79/88 (89%)
 Frame = +3

Query: 186 EKCSWLQSQQIGNYIEFDTPFGKRRLTYADHTASGRSLLHIESFIVENVLPFYGNTHTDD 365
           +K +WL+SQ IG+ +EFD+PFGKRRLTYADHTASGRSL +IE+FI+ NVLPFYGNTHT D
Sbjct: 1   KKLAWLRSQIIGDDVEFDSPFGKRRLTYADHTASGRSLRYIENFIINNVLPFYGNTHTSD 60

Query: 366 SFVGQRTTKMVHEATKYIKKCLGGAQED 449
           S+VG +TTKM+HEA +YIKKCLGG Q+D
Sbjct: 61  SYVGHKTTKMLHEAAEYIKKCLGGGQDD 88


>ref|XP_002335110.1| predicted protein [Populus trichocarpa] gi|222832878|gb|EEE71355.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score =  144 bits (363), Expect = 7e-33
 Identities = 65/91 (71%), Positives = 78/91 (85%)
 Frame = +3

Query: 177 SIHEKCSWLQSQQIGNYIEFDTPFGKRRLTYADHTASGRSLLHIESFIVENVLPFYGNTH 356
           S  +K +WL+SQ +G+ +EFD+PFG+RRLTYADHTASGRSL +IE+FI+ NVLPFYGNTH
Sbjct: 76  STEKKLAWLRSQIVGDDVEFDSPFGRRRLTYADHTASGRSLRYIENFIINNVLPFYGNTH 135

Query: 357 TDDSFVGQRTTKMVHEATKYIKKCLGGAQED 449
           T DS VG RTTKM+HEA +YIKKCLGG Q D
Sbjct: 136 TSDSHVGHRTTKMLHEAAEYIKKCLGGGQND 166


>ref|XP_002517249.1| cysteine desulfurylase, putative [Ricinus communis]
           gi|223543620|gb|EEF45149.1| cysteine desulfurylase,
           putative [Ricinus communis]
          Length = 633

 Score =  143 bits (360), Expect = 2e-32
 Identities = 66/98 (67%), Positives = 82/98 (83%)
 Frame = +3

Query: 156 IDLQSELSIHEKCSWLQSQQIGNYIEFDTPFGKRRLTYADHTASGRSLLHIESFIVENVL 335
           I +   +S   + +WL+SQ IG+ +EF++PFGKRRLTYADHTASGRSL +IE+FI+ NVL
Sbjct: 57  IGVPKSISSERRLAWLRSQIIGDDVEFESPFGKRRLTYADHTASGRSLHYIENFIINNVL 116

Query: 336 PFYGNTHTDDSFVGQRTTKMVHEATKYIKKCLGGAQED 449
           PFYGNTHT DS+VG RTTKMVHEAT+YIK+ LGG +ED
Sbjct: 117 PFYGNTHTCDSYVGHRTTKMVHEATQYIKRSLGGGEED 154


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