BLASTX nr result

ID: Coptis25_contig00020153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020153
         (650 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO73527.1| gag-pol polyprotein [Glycine max]                      130   3e-37
gb|AAO73529.1| gag-pol polyprotein [Glycine max]                      129   4e-37
gb|AAO73521.1| gag-pol polyprotein [Glycine max]                      129   4e-37
emb|CAN76333.1| hypothetical protein VITISV_021982 [Vitis vinifera]   125   2e-36
emb|CAN75147.1| hypothetical protein VITISV_014145 [Vitis vinifera]   125   3e-36

>gb|AAO73527.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score =  130 bits (326), Expect(2) = 3e-37
 Identities = 65/161 (40%), Positives = 98/161 (60%)
 Frame = -1

Query: 641 GTSNRPPQFDGNNFPY*KARMTAYLQALGDYVWIALEDGWVHPAQTIGFGDTAVNSLRP* 462
           G  NRPP  DG+N+ Y KARM A+L++L    W A+  GW HP      G    + L+P 
Sbjct: 8   GPVNRPPILDGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPT-DELKPE 66

Query: 461 NMWINVEKTLSSHNNKGRSAIFMTMNHNEFRRISACTTSKEAWDKLVMAHEGNSAVKESK 282
             W   E  L+  N+K  +A+F  ++ N FR I+ CT +K+AW+ L + HEG S VK S+
Sbjct: 67  EDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKITHEGTSKVKMSR 126

Query: 281 LELLTTKFETMKMEDSETFDEFFIRLQDVINSSTSLGLRVS 159
           L+LL TKFE +KM++ E   +F + + ++ N+ T+LG R++
Sbjct: 127 LQLLATKFENLKMKEEECIHDFHMNILEIANACTALGERIT 167



 Score = 51.2 bits (121), Expect(2) = 3e-37
 Identities = 26/48 (54%), Positives = 33/48 (68%)
 Frame = -2

Query: 157 DVKVGRKILRSLPKRFRSRKDTIQEAHDIKTMTIETLAGKLRTFEMEL 14
           D K+ RKILRSLPKRF  +   I+EA DI  M ++ L G L+TFE+ L
Sbjct: 168 DEKLVRKILRSLPKRFDMKVTAIEEAQDICNMRVDELIGSLQTFELGL 215


>gb|AAO73529.1| gag-pol polyprotein [Glycine max]
          Length = 1577

 Score =  129 bits (325), Expect(2) = 4e-37
 Identities = 66/161 (40%), Positives = 96/161 (59%)
 Frame = -1

Query: 641 GTSNRPPQFDGNNFPY*KARMTAYLQALGDYVWIALEDGWVHPAQTIGFGDTAVNSLRP* 462
           G  NRPP  DG N+ Y KARM A+L++L    W A+  GW HP      G    N L+P 
Sbjct: 8   GPVNRPPILDGTNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPT-NELKPE 66

Query: 461 NMWINVEKTLSSHNNKGRSAIFMTMNHNEFRRISACTTSKEAWDKLVMAHEGNSAVKESK 282
             W   E  L+  N+K  +A+F  ++ N FR I+ CT +K+AW+ L   HEG S VK S+
Sbjct: 67  EDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKTTHEGTSKVKMSR 126

Query: 281 LELLTTKFETMKMEDSETFDEFFIRLQDVINSSTSLGLRVS 159
           L+LL TKFE +KM++ E   +F + + ++ N+ T+LG R++
Sbjct: 127 LQLLATKFENLKMKEEECIHDFHMTILEIANACTALGERMT 167



 Score = 51.2 bits (121), Expect(2) = 4e-37
 Identities = 26/48 (54%), Positives = 33/48 (68%)
 Frame = -2

Query: 157 DVKVGRKILRSLPKRFRSRKDTIQEAHDIKTMTIETLAGKLRTFEMEL 14
           D K+ RKILRSLPKRF  +   I+EA DI  M ++ L G L+TFE+ L
Sbjct: 168 DEKLVRKILRSLPKRFDMKVTAIEEAQDICNMRVDELIGSLQTFELGL 215


>gb|AAO73521.1| gag-pol polyprotein [Glycine max]
          Length = 1574

 Score =  129 bits (325), Expect(2) = 4e-37
 Identities = 65/161 (40%), Positives = 98/161 (60%)
 Frame = -1

Query: 641 GTSNRPPQFDGNNFPY*KARMTAYLQALGDYVWIALEDGWVHPAQTIGFGDTAVNSLRP* 462
           G  NRPP  DG+N+ Y KARM A+L++L    W A+  GW HP      G    + L+P 
Sbjct: 8   GPVNRPPILDGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPT-DELKPE 66

Query: 461 NMWINVEKTLSSHNNKGRSAIFMTMNHNEFRRISACTTSKEAWDKLVMAHEGNSAVKESK 282
             W   E  L+  N+K  +A+F  ++ N FR I+ CT +K+AW+ L + HEG S VK S+
Sbjct: 67  EDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKITHEGTSKVKISR 126

Query: 281 LELLTTKFETMKMEDSETFDEFFIRLQDVINSSTSLGLRVS 159
           L+LL TKFE +KM++ E   +F + + ++ N+ T+LG R++
Sbjct: 127 LQLLATKFENLKMKEEECIHDFHMNILEIANACTALGERIT 167



 Score = 51.2 bits (121), Expect(2) = 4e-37
 Identities = 26/48 (54%), Positives = 33/48 (68%)
 Frame = -2

Query: 157 DVKVGRKILRSLPKRFRSRKDTIQEAHDIKTMTIETLAGKLRTFEMEL 14
           D K+ RKILRSLPKRF  +   I+EA DI  M ++ L G L+TFE+ L
Sbjct: 168 DEKLVRKILRSLPKRFDMKVTAIEEAQDICNMRVDELIGSLQTFELGL 215


>emb|CAN76333.1| hypothetical protein VITISV_021982 [Vitis vinifera]
          Length = 801

 Score =  125 bits (313), Expect(2) = 2e-36
 Identities = 63/157 (40%), Positives = 95/157 (60%)
 Frame = -1

Query: 629 RPPQFDGNNFPY*KARMTAYLQALGDYVWIALEDGWVHPAQTIGFGDTAVNSLRP*NMWI 450
           RPP   G N+ + K RM  +L+   +  W  +E GW  P + +       N ++P   W 
Sbjct: 12  RPPFLTGENYSHWKVRMQYFLKMQSEKXWNTVEFGW-SPPKVLDREGRPTNXIKPKLEWD 70

Query: 449 NVEKTLSSHNNKGRSAIFMTMNHNEFRRISACTTSKEAWDKLVMAHEGNSAVKESKLELL 270
             E   S +N +   +IF  ++ +EFRRI+ CT++KEAWD L + HEG +A K SKL++L
Sbjct: 71  RXENEASENNARAMYSIFNAISTDEFRRIATCTSAKEAWDILQVTHEGTNAXKVSKLQML 130

Query: 269 TTKFETMKMEDSETFDEFFIRLQDVINSSTSLGLRVS 159
           T++FET++M+D ETF EF  +L D +NSS +LG  +S
Sbjct: 131 TSRFETIRMDDHETFGEFNAKLMDXVNSSFNLGEPIS 167



 Score = 53.1 bits (126), Expect(2) = 2e-36
 Identities = 25/46 (54%), Positives = 35/46 (76%)
 Frame = -2

Query: 151 KVGRKILRSLPKRFRSRKDTIQEAHDIKTMTIETLAGKLRTFEMEL 14
           KV RKILRSLP+RFR++   I+E+ D+ ++ I+ L G L+TFEM L
Sbjct: 170 KVVRKILRSLPERFRAKVTAIEESKDVDSLKIDELVGSLQTFEMTL 215


>emb|CAN75147.1| hypothetical protein VITISV_014145 [Vitis vinifera]
          Length = 783

 Score =  125 bits (315), Expect(2) = 3e-36
 Identities = 63/153 (41%), Positives = 95/153 (62%)
 Frame = -1

Query: 629 RPPQFDGNNFPY*KARMTAYLQALGDYVWIALEDGWVHPAQTIGFGDTAVNSLRP*NMWI 450
           RPP   G N+ + K RM  +L+   + VW A+E GW  P + +       N ++P   W 
Sbjct: 12  RPPFLTGENYSHWKVRMQYFLKMQSEKVWNAVEFGW-SPPKVLDREGRPTNVIKPKLEWD 70

Query: 449 NVEKTLSSHNNKGRSAIFMTMNHNEFRRISACTTSKEAWDKLVMAHEGNSAVKESKLELL 270
             +   S +N +   +IF  ++ +EFRRI+ CT++KEAWD L + HE  +AVK SKL +L
Sbjct: 71  RGDNEASENNARAMYSIFNAISTDEFRRIATCTSAKEAWDILQVTHEDTNAVKVSKLLML 130

Query: 269 TTKFETMKMEDSETFDEFFIRLQDVINSSTSLG 171
           T++FET++MED E F EF+ +L D++NSS +LG
Sbjct: 131 TSRFETIRMEDHENFGEFYAKLMDIVNSSFNLG 163



 Score = 52.0 bits (123), Expect(2) = 3e-36
 Identities = 24/49 (48%), Positives = 36/49 (73%)
 Frame = -2

Query: 160 PDVKVGRKILRSLPKRFRSRKDTIQEAHDIKTMTIETLAGKLRTFEMEL 14
           P+ KV RKILRSL +RFR++   I+E+ D+ ++ ++ L G L+TFEM L
Sbjct: 167 PNSKVVRKILRSLSERFRAKVTAIEESKDVDSLKVDELVGSLQTFEMTL 215


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