BLASTX nr result
ID: Coptis25_contig00020153
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00020153 (650 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAO73527.1| gag-pol polyprotein [Glycine max] 130 3e-37 gb|AAO73529.1| gag-pol polyprotein [Glycine max] 129 4e-37 gb|AAO73521.1| gag-pol polyprotein [Glycine max] 129 4e-37 emb|CAN76333.1| hypothetical protein VITISV_021982 [Vitis vinifera] 125 2e-36 emb|CAN75147.1| hypothetical protein VITISV_014145 [Vitis vinifera] 125 3e-36 >gb|AAO73527.1| gag-pol polyprotein [Glycine max] Length = 1576 Score = 130 bits (326), Expect(2) = 3e-37 Identities = 65/161 (40%), Positives = 98/161 (60%) Frame = -1 Query: 641 GTSNRPPQFDGNNFPY*KARMTAYLQALGDYVWIALEDGWVHPAQTIGFGDTAVNSLRP* 462 G NRPP DG+N+ Y KARM A+L++L W A+ GW HP G + L+P Sbjct: 8 GPVNRPPILDGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPT-DELKPE 66 Query: 461 NMWINVEKTLSSHNNKGRSAIFMTMNHNEFRRISACTTSKEAWDKLVMAHEGNSAVKESK 282 W E L+ N+K +A+F ++ N FR I+ CT +K+AW+ L + HEG S VK S+ Sbjct: 67 EDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKITHEGTSKVKMSR 126 Query: 281 LELLTTKFETMKMEDSETFDEFFIRLQDVINSSTSLGLRVS 159 L+LL TKFE +KM++ E +F + + ++ N+ T+LG R++ Sbjct: 127 LQLLATKFENLKMKEEECIHDFHMNILEIANACTALGERIT 167 Score = 51.2 bits (121), Expect(2) = 3e-37 Identities = 26/48 (54%), Positives = 33/48 (68%) Frame = -2 Query: 157 DVKVGRKILRSLPKRFRSRKDTIQEAHDIKTMTIETLAGKLRTFEMEL 14 D K+ RKILRSLPKRF + I+EA DI M ++ L G L+TFE+ L Sbjct: 168 DEKLVRKILRSLPKRFDMKVTAIEEAQDICNMRVDELIGSLQTFELGL 215 >gb|AAO73529.1| gag-pol polyprotein [Glycine max] Length = 1577 Score = 129 bits (325), Expect(2) = 4e-37 Identities = 66/161 (40%), Positives = 96/161 (59%) Frame = -1 Query: 641 GTSNRPPQFDGNNFPY*KARMTAYLQALGDYVWIALEDGWVHPAQTIGFGDTAVNSLRP* 462 G NRPP DG N+ Y KARM A+L++L W A+ GW HP G N L+P Sbjct: 8 GPVNRPPILDGTNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPT-NELKPE 66 Query: 461 NMWINVEKTLSSHNNKGRSAIFMTMNHNEFRRISACTTSKEAWDKLVMAHEGNSAVKESK 282 W E L+ N+K +A+F ++ N FR I+ CT +K+AW+ L HEG S VK S+ Sbjct: 67 EDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKTTHEGTSKVKMSR 126 Query: 281 LELLTTKFETMKMEDSETFDEFFIRLQDVINSSTSLGLRVS 159 L+LL TKFE +KM++ E +F + + ++ N+ T+LG R++ Sbjct: 127 LQLLATKFENLKMKEEECIHDFHMTILEIANACTALGERMT 167 Score = 51.2 bits (121), Expect(2) = 4e-37 Identities = 26/48 (54%), Positives = 33/48 (68%) Frame = -2 Query: 157 DVKVGRKILRSLPKRFRSRKDTIQEAHDIKTMTIETLAGKLRTFEMEL 14 D K+ RKILRSLPKRF + I+EA DI M ++ L G L+TFE+ L Sbjct: 168 DEKLVRKILRSLPKRFDMKVTAIEEAQDICNMRVDELIGSLQTFELGL 215 >gb|AAO73521.1| gag-pol polyprotein [Glycine max] Length = 1574 Score = 129 bits (325), Expect(2) = 4e-37 Identities = 65/161 (40%), Positives = 98/161 (60%) Frame = -1 Query: 641 GTSNRPPQFDGNNFPY*KARMTAYLQALGDYVWIALEDGWVHPAQTIGFGDTAVNSLRP* 462 G NRPP DG+N+ Y KARM A+L++L W A+ GW HP G + L+P Sbjct: 8 GPVNRPPILDGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPT-DELKPE 66 Query: 461 NMWINVEKTLSSHNNKGRSAIFMTMNHNEFRRISACTTSKEAWDKLVMAHEGNSAVKESK 282 W E L+ N+K +A+F ++ N FR I+ CT +K+AW+ L + HEG S VK S+ Sbjct: 67 EDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKITHEGTSKVKISR 126 Query: 281 LELLTTKFETMKMEDSETFDEFFIRLQDVINSSTSLGLRVS 159 L+LL TKFE +KM++ E +F + + ++ N+ T+LG R++ Sbjct: 127 LQLLATKFENLKMKEEECIHDFHMNILEIANACTALGERIT 167 Score = 51.2 bits (121), Expect(2) = 4e-37 Identities = 26/48 (54%), Positives = 33/48 (68%) Frame = -2 Query: 157 DVKVGRKILRSLPKRFRSRKDTIQEAHDIKTMTIETLAGKLRTFEMEL 14 D K+ RKILRSLPKRF + I+EA DI M ++ L G L+TFE+ L Sbjct: 168 DEKLVRKILRSLPKRFDMKVTAIEEAQDICNMRVDELIGSLQTFELGL 215 >emb|CAN76333.1| hypothetical protein VITISV_021982 [Vitis vinifera] Length = 801 Score = 125 bits (313), Expect(2) = 2e-36 Identities = 63/157 (40%), Positives = 95/157 (60%) Frame = -1 Query: 629 RPPQFDGNNFPY*KARMTAYLQALGDYVWIALEDGWVHPAQTIGFGDTAVNSLRP*NMWI 450 RPP G N+ + K RM +L+ + W +E GW P + + N ++P W Sbjct: 12 RPPFLTGENYSHWKVRMQYFLKMQSEKXWNTVEFGW-SPPKVLDREGRPTNXIKPKLEWD 70 Query: 449 NVEKTLSSHNNKGRSAIFMTMNHNEFRRISACTTSKEAWDKLVMAHEGNSAVKESKLELL 270 E S +N + +IF ++ +EFRRI+ CT++KEAWD L + HEG +A K SKL++L Sbjct: 71 RXENEASENNARAMYSIFNAISTDEFRRIATCTSAKEAWDILQVTHEGTNAXKVSKLQML 130 Query: 269 TTKFETMKMEDSETFDEFFIRLQDVINSSTSLGLRVS 159 T++FET++M+D ETF EF +L D +NSS +LG +S Sbjct: 131 TSRFETIRMDDHETFGEFNAKLMDXVNSSFNLGEPIS 167 Score = 53.1 bits (126), Expect(2) = 2e-36 Identities = 25/46 (54%), Positives = 35/46 (76%) Frame = -2 Query: 151 KVGRKILRSLPKRFRSRKDTIQEAHDIKTMTIETLAGKLRTFEMEL 14 KV RKILRSLP+RFR++ I+E+ D+ ++ I+ L G L+TFEM L Sbjct: 170 KVVRKILRSLPERFRAKVTAIEESKDVDSLKIDELVGSLQTFEMTL 215 >emb|CAN75147.1| hypothetical protein VITISV_014145 [Vitis vinifera] Length = 783 Score = 125 bits (315), Expect(2) = 3e-36 Identities = 63/153 (41%), Positives = 95/153 (62%) Frame = -1 Query: 629 RPPQFDGNNFPY*KARMTAYLQALGDYVWIALEDGWVHPAQTIGFGDTAVNSLRP*NMWI 450 RPP G N+ + K RM +L+ + VW A+E GW P + + N ++P W Sbjct: 12 RPPFLTGENYSHWKVRMQYFLKMQSEKVWNAVEFGW-SPPKVLDREGRPTNVIKPKLEWD 70 Query: 449 NVEKTLSSHNNKGRSAIFMTMNHNEFRRISACTTSKEAWDKLVMAHEGNSAVKESKLELL 270 + S +N + +IF ++ +EFRRI+ CT++KEAWD L + HE +AVK SKL +L Sbjct: 71 RGDNEASENNARAMYSIFNAISTDEFRRIATCTSAKEAWDILQVTHEDTNAVKVSKLLML 130 Query: 269 TTKFETMKMEDSETFDEFFIRLQDVINSSTSLG 171 T++FET++MED E F EF+ +L D++NSS +LG Sbjct: 131 TSRFETIRMEDHENFGEFYAKLMDIVNSSFNLG 163 Score = 52.0 bits (123), Expect(2) = 3e-36 Identities = 24/49 (48%), Positives = 36/49 (73%) Frame = -2 Query: 160 PDVKVGRKILRSLPKRFRSRKDTIQEAHDIKTMTIETLAGKLRTFEMEL 14 P+ KV RKILRSL +RFR++ I+E+ D+ ++ ++ L G L+TFEM L Sbjct: 167 PNSKVVRKILRSLSERFRAKVTAIEESKDVDSLKVDELVGSLQTFEMTL 215