BLASTX nr result
ID: Coptis25_contig00020153
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00020153
(650 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO73527.1| gag-pol polyprotein [Glycine max] 130 3e-37
gb|AAO73529.1| gag-pol polyprotein [Glycine max] 129 4e-37
gb|AAO73521.1| gag-pol polyprotein [Glycine max] 129 4e-37
emb|CAN76333.1| hypothetical protein VITISV_021982 [Vitis vinifera] 125 2e-36
emb|CAN75147.1| hypothetical protein VITISV_014145 [Vitis vinifera] 125 3e-36
>gb|AAO73527.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 130 bits (326), Expect(2) = 3e-37
Identities = 65/161 (40%), Positives = 98/161 (60%)
Frame = -1
Query: 641 GTSNRPPQFDGNNFPY*KARMTAYLQALGDYVWIALEDGWVHPAQTIGFGDTAVNSLRP* 462
G NRPP DG+N+ Y KARM A+L++L W A+ GW HP G + L+P
Sbjct: 8 GPVNRPPILDGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPT-DELKPE 66
Query: 461 NMWINVEKTLSSHNNKGRSAIFMTMNHNEFRRISACTTSKEAWDKLVMAHEGNSAVKESK 282
W E L+ N+K +A+F ++ N FR I+ CT +K+AW+ L + HEG S VK S+
Sbjct: 67 EDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKITHEGTSKVKMSR 126
Query: 281 LELLTTKFETMKMEDSETFDEFFIRLQDVINSSTSLGLRVS 159
L+LL TKFE +KM++ E +F + + ++ N+ T+LG R++
Sbjct: 127 LQLLATKFENLKMKEEECIHDFHMNILEIANACTALGERIT 167
Score = 51.2 bits (121), Expect(2) = 3e-37
Identities = 26/48 (54%), Positives = 33/48 (68%)
Frame = -2
Query: 157 DVKVGRKILRSLPKRFRSRKDTIQEAHDIKTMTIETLAGKLRTFEMEL 14
D K+ RKILRSLPKRF + I+EA DI M ++ L G L+TFE+ L
Sbjct: 168 DEKLVRKILRSLPKRFDMKVTAIEEAQDICNMRVDELIGSLQTFELGL 215
>gb|AAO73529.1| gag-pol polyprotein [Glycine max]
Length = 1577
Score = 129 bits (325), Expect(2) = 4e-37
Identities = 66/161 (40%), Positives = 96/161 (59%)
Frame = -1
Query: 641 GTSNRPPQFDGNNFPY*KARMTAYLQALGDYVWIALEDGWVHPAQTIGFGDTAVNSLRP* 462
G NRPP DG N+ Y KARM A+L++L W A+ GW HP G N L+P
Sbjct: 8 GPVNRPPILDGTNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPT-NELKPE 66
Query: 461 NMWINVEKTLSSHNNKGRSAIFMTMNHNEFRRISACTTSKEAWDKLVMAHEGNSAVKESK 282
W E L+ N+K +A+F ++ N FR I+ CT +K+AW+ L HEG S VK S+
Sbjct: 67 EDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKTTHEGTSKVKMSR 126
Query: 281 LELLTTKFETMKMEDSETFDEFFIRLQDVINSSTSLGLRVS 159
L+LL TKFE +KM++ E +F + + ++ N+ T+LG R++
Sbjct: 127 LQLLATKFENLKMKEEECIHDFHMTILEIANACTALGERMT 167
Score = 51.2 bits (121), Expect(2) = 4e-37
Identities = 26/48 (54%), Positives = 33/48 (68%)
Frame = -2
Query: 157 DVKVGRKILRSLPKRFRSRKDTIQEAHDIKTMTIETLAGKLRTFEMEL 14
D K+ RKILRSLPKRF + I+EA DI M ++ L G L+TFE+ L
Sbjct: 168 DEKLVRKILRSLPKRFDMKVTAIEEAQDICNMRVDELIGSLQTFELGL 215
>gb|AAO73521.1| gag-pol polyprotein [Glycine max]
Length = 1574
Score = 129 bits (325), Expect(2) = 4e-37
Identities = 65/161 (40%), Positives = 98/161 (60%)
Frame = -1
Query: 641 GTSNRPPQFDGNNFPY*KARMTAYLQALGDYVWIALEDGWVHPAQTIGFGDTAVNSLRP* 462
G NRPP DG+N+ Y KARM A+L++L W A+ GW HP G + L+P
Sbjct: 8 GPVNRPPILDGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPT-DELKPE 66
Query: 461 NMWINVEKTLSSHNNKGRSAIFMTMNHNEFRRISACTTSKEAWDKLVMAHEGNSAVKESK 282
W E L+ N+K +A+F ++ N FR I+ CT +K+AW+ L + HEG S VK S+
Sbjct: 67 EDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKITHEGTSKVKISR 126
Query: 281 LELLTTKFETMKMEDSETFDEFFIRLQDVINSSTSLGLRVS 159
L+LL TKFE +KM++ E +F + + ++ N+ T+LG R++
Sbjct: 127 LQLLATKFENLKMKEEECIHDFHMNILEIANACTALGERIT 167
Score = 51.2 bits (121), Expect(2) = 4e-37
Identities = 26/48 (54%), Positives = 33/48 (68%)
Frame = -2
Query: 157 DVKVGRKILRSLPKRFRSRKDTIQEAHDIKTMTIETLAGKLRTFEMEL 14
D K+ RKILRSLPKRF + I+EA DI M ++ L G L+TFE+ L
Sbjct: 168 DEKLVRKILRSLPKRFDMKVTAIEEAQDICNMRVDELIGSLQTFELGL 215
>emb|CAN76333.1| hypothetical protein VITISV_021982 [Vitis vinifera]
Length = 801
Score = 125 bits (313), Expect(2) = 2e-36
Identities = 63/157 (40%), Positives = 95/157 (60%)
Frame = -1
Query: 629 RPPQFDGNNFPY*KARMTAYLQALGDYVWIALEDGWVHPAQTIGFGDTAVNSLRP*NMWI 450
RPP G N+ + K RM +L+ + W +E GW P + + N ++P W
Sbjct: 12 RPPFLTGENYSHWKVRMQYFLKMQSEKXWNTVEFGW-SPPKVLDREGRPTNXIKPKLEWD 70
Query: 449 NVEKTLSSHNNKGRSAIFMTMNHNEFRRISACTTSKEAWDKLVMAHEGNSAVKESKLELL 270
E S +N + +IF ++ +EFRRI+ CT++KEAWD L + HEG +A K SKL++L
Sbjct: 71 RXENEASENNARAMYSIFNAISTDEFRRIATCTSAKEAWDILQVTHEGTNAXKVSKLQML 130
Query: 269 TTKFETMKMEDSETFDEFFIRLQDVINSSTSLGLRVS 159
T++FET++M+D ETF EF +L D +NSS +LG +S
Sbjct: 131 TSRFETIRMDDHETFGEFNAKLMDXVNSSFNLGEPIS 167
Score = 53.1 bits (126), Expect(2) = 2e-36
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = -2
Query: 151 KVGRKILRSLPKRFRSRKDTIQEAHDIKTMTIETLAGKLRTFEMEL 14
KV RKILRSLP+RFR++ I+E+ D+ ++ I+ L G L+TFEM L
Sbjct: 170 KVVRKILRSLPERFRAKVTAIEESKDVDSLKIDELVGSLQTFEMTL 215
>emb|CAN75147.1| hypothetical protein VITISV_014145 [Vitis vinifera]
Length = 783
Score = 125 bits (315), Expect(2) = 3e-36
Identities = 63/153 (41%), Positives = 95/153 (62%)
Frame = -1
Query: 629 RPPQFDGNNFPY*KARMTAYLQALGDYVWIALEDGWVHPAQTIGFGDTAVNSLRP*NMWI 450
RPP G N+ + K RM +L+ + VW A+E GW P + + N ++P W
Sbjct: 12 RPPFLTGENYSHWKVRMQYFLKMQSEKVWNAVEFGW-SPPKVLDREGRPTNVIKPKLEWD 70
Query: 449 NVEKTLSSHNNKGRSAIFMTMNHNEFRRISACTTSKEAWDKLVMAHEGNSAVKESKLELL 270
+ S +N + +IF ++ +EFRRI+ CT++KEAWD L + HE +AVK SKL +L
Sbjct: 71 RGDNEASENNARAMYSIFNAISTDEFRRIATCTSAKEAWDILQVTHEDTNAVKVSKLLML 130
Query: 269 TTKFETMKMEDSETFDEFFIRLQDVINSSTSLG 171
T++FET++MED E F EF+ +L D++NSS +LG
Sbjct: 131 TSRFETIRMEDHENFGEFYAKLMDIVNSSFNLG 163
Score = 52.0 bits (123), Expect(2) = 3e-36
Identities = 24/49 (48%), Positives = 36/49 (73%)
Frame = -2
Query: 160 PDVKVGRKILRSLPKRFRSRKDTIQEAHDIKTMTIETLAGKLRTFEMEL 14
P+ KV RKILRSL +RFR++ I+E+ D+ ++ ++ L G L+TFEM L
Sbjct: 167 PNSKVVRKILRSLSERFRAKVTAIEESKDVDSLKVDELVGSLQTFEMTL 215