BLASTX nr result
ID: Coptis25_contig00020150
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00020150 (1600 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AEK21856.2| ribulose-1,5-bisphosphate carboxylase/oxygenase l... 129 2e-27 gb|AEK21859.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l... 129 2e-27 gb|AEK21845.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l... 129 2e-27 gb|ACS73577.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l... 129 2e-27 gb|AAY33020.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l... 129 2e-27 >gb|AEK21856.2| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Coptis teeta] gi|354549680|gb|AEK21846.2| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Coptis chinensis] gi|361073073|gb|AEW10542.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Coptis chinensis var. brevisepala] gi|361073075|gb|AEW10543.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Coptis omeiensis] gi|361073077|gb|AEW10544.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Coptis teeta] Length = 223 Score = 129 bits (324), Expect = 2e-27 Identities = 59/74 (79%), Positives = 63/74 (85%) Frame = +1 Query: 703 NYKLTYYTPQYTPKDTDTLAAFRVTPQPGVPLXXXXXXXXXXSSTGTWTTMWTDGLTNLD 882 +YKLTYYTPQYTPKDTDTLAAFRVTPQPGVP SSTGTWTT+WTDGLT+LD Sbjct: 1 DYKLTYYTPQYTPKDTDTLAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLD 60 Query: 883 RYKGQCYDIEPVAG 924 RYKG+CYDIEPVAG Sbjct: 61 RYKGRCYDIEPVAG 74 >gb|AEK21859.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Coptis teeta] Length = 202 Score = 129 bits (324), Expect = 2e-27 Identities = 59/74 (79%), Positives = 63/74 (85%) Frame = +1 Query: 703 NYKLTYYTPQYTPKDTDTLAAFRVTPQPGVPLXXXXXXXXXXSSTGTWTTMWTDGLTNLD 882 +YKLTYYTPQYTPKDTDTLAAFRVTPQPGVP SSTGTWTT+WTDGLT+LD Sbjct: 1 DYKLTYYTPQYTPKDTDTLAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLD 60 Query: 883 RYKGQCYDIEPVAG 924 RYKG+CYDIEPVAG Sbjct: 61 RYKGRCYDIEPVAG 74 >gb|AEK21845.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Coptis chinensis] gi|339897333|gb|AEK21847.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Coptis chinensis var. brevisepala] gi|339897335|gb|AEK21848.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Coptis deltoidea] gi|339897337|gb|AEK21849.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Coptis deltoidea] gi|339897339|gb|AEK21850.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Coptis deltoidea] gi|339897341|gb|AEK21851.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Coptis deltoidea] gi|339897343|gb|AEK21852.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Coptis deltoidea] gi|339897345|gb|AEK21853.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Coptis omeiensis] gi|339897347|gb|AEK21854.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Coptis omeiensis] gi|339897349|gb|AEK21855.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Coptis omeiensis] gi|339897355|gb|AEK21857.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Coptis teeta] gi|339897357|gb|AEK21858.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Coptis teeta] Length = 205 Score = 129 bits (324), Expect = 2e-27 Identities = 59/74 (79%), Positives = 63/74 (85%) Frame = +1 Query: 703 NYKLTYYTPQYTPKDTDTLAAFRVTPQPGVPLXXXXXXXXXXSSTGTWTTMWTDGLTNLD 882 +YKLTYYTPQYTPKDTDTLAAFRVTPQPGVP SSTGTWTT+WTDGLT+LD Sbjct: 4 DYKLTYYTPQYTPKDTDTLAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLD 63 Query: 883 RYKGQCYDIEPVAG 924 RYKG+CYDIEPVAG Sbjct: 64 RYKGRCYDIEPVAG 77 >gb|ACS73577.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Coptis chinensis] Length = 463 Score = 129 bits (324), Expect = 2e-27 Identities = 59/74 (79%), Positives = 63/74 (85%) Frame = +1 Query: 703 NYKLTYYTPQYTPKDTDTLAAFRVTPQPGVPLXXXXXXXXXXSSTGTWTTMWTDGLTNLD 882 +YKLTYYTPQYTPKDTDTLAAFRVTPQPGVP SSTGTWTT+WTDGLT+LD Sbjct: 7 DYKLTYYTPQYTPKDTDTLAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLD 66 Query: 883 RYKGQCYDIEPVAG 924 RYKG+CYDIEPVAG Sbjct: 67 RYKGRCYDIEPVAG 80 >gb|AAY33020.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Coptis chinensis] Length = 463 Score = 129 bits (324), Expect = 2e-27 Identities = 59/74 (79%), Positives = 63/74 (85%) Frame = +1 Query: 703 NYKLTYYTPQYTPKDTDTLAAFRVTPQPGVPLXXXXXXXXXXSSTGTWTTMWTDGLTNLD 882 +YKLTYYTPQYTPKDTDTLAAFRVTPQPGVP SSTGTWTT+WTDGLT+LD Sbjct: 7 DYKLTYYTPQYTPKDTDTLAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLD 66 Query: 883 RYKGQCYDIEPVAG 924 RYKG+CYDIEPVAG Sbjct: 67 RYKGRCYDIEPVAG 80