BLASTX nr result
ID: Coptis25_contig00020144
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00020144 (231 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003609086.1| WD-40 repeat protein [Medicago truncatula] g... 57 2e-14 gb|AFK42119.1| unknown [Medicago truncatula] gi|388510080|gb|AFK... 57 2e-14 gb|ACJ84777.1| unknown [Medicago truncatula] 57 2e-14 ref|XP_003535974.1| PREDICTED: WD repeat-containing protein 55-l... 52 6e-13 ref|XP_003556911.1| PREDICTED: WD repeat-containing protein 55-l... 50 4e-12 >ref|XP_003609086.1| WD-40 repeat protein [Medicago truncatula] gi|355510141|gb|AES91283.1| WD-40 repeat protein [Medicago truncatula] Length = 420 Score = 56.6 bits (135), Expect(2) = 2e-14 Identities = 26/30 (86%), Positives = 29/30 (96%) Frame = +2 Query: 2 AILTASPDFSILATDVQTGATIARLDNAHE 91 A+LT SPDFSILATDV+TG+TIARLDNAHE Sbjct: 129 AVLTGSPDFSILATDVETGSTIARLDNAHE 158 Score = 47.0 bits (110), Expect(2) = 2e-14 Identities = 20/24 (83%), Positives = 24/24 (100%) Frame = +1 Query: 160 AAVNRLVNLTETTIASGDDNGCIK 231 AAVNRL+NLTE+T+ASGDD+GCIK Sbjct: 159 AAVNRLINLTESTVASGDDDGCIK 182 >gb|AFK42119.1| unknown [Medicago truncatula] gi|388510080|gb|AFK43106.1| unknown [Medicago truncatula] Length = 359 Score = 56.6 bits (135), Expect(2) = 2e-14 Identities = 26/30 (86%), Positives = 29/30 (96%) Frame = +2 Query: 2 AILTASPDFSILATDVQTGATIARLDNAHE 91 A+LT SPDFSILATDV+TG+TIARLDNAHE Sbjct: 68 AVLTGSPDFSILATDVETGSTIARLDNAHE 97 Score = 47.0 bits (110), Expect(2) = 2e-14 Identities = 20/24 (83%), Positives = 24/24 (100%) Frame = +1 Query: 160 AAVNRLVNLTETTIASGDDNGCIK 231 AAVNRL+NLTE+T+ASGDD+GCIK Sbjct: 98 AAVNRLINLTESTVASGDDDGCIK 121 >gb|ACJ84777.1| unknown [Medicago truncatula] Length = 359 Score = 56.6 bits (135), Expect(2) = 2e-14 Identities = 26/30 (86%), Positives = 29/30 (96%) Frame = +2 Query: 2 AILTASPDFSILATDVQTGATIARLDNAHE 91 A+LT SPDFSILATDV+TG+TIARLDNAHE Sbjct: 68 AVLTGSPDFSILATDVETGSTIARLDNAHE 97 Score = 47.0 bits (110), Expect(2) = 2e-14 Identities = 20/24 (83%), Positives = 24/24 (100%) Frame = +1 Query: 160 AAVNRLVNLTETTIASGDDNGCIK 231 AAVNRL+NLTE+T+ASGDD+GCIK Sbjct: 98 AAVNRLINLTESTVASGDDDGCIK 121 >ref|XP_003535974.1| PREDICTED: WD repeat-containing protein 55-like [Glycine max] Length = 352 Score = 52.0 bits (123), Expect(2) = 6e-13 Identities = 25/30 (83%), Positives = 28/30 (93%) Frame = +2 Query: 2 AILTASPDFSILATDVQTGATIARLDNAHE 91 AILT SPD SILATDV+TG+TIARLD+AHE Sbjct: 65 AILTGSPDCSILATDVETGSTIARLDDAHE 94 Score = 46.6 bits (109), Expect(2) = 6e-13 Identities = 20/24 (83%), Positives = 23/24 (95%) Frame = +1 Query: 160 AAVNRLVNLTETTIASGDDNGCIK 231 AAVNRL+NLTE+T+ASGDD GCIK Sbjct: 95 AAVNRLINLTESTVASGDDEGCIK 118 >ref|XP_003556911.1| PREDICTED: WD repeat-containing protein 55-like [Glycine max] Length = 313 Score = 49.7 bits (117), Expect(2) = 4e-12 Identities = 24/30 (80%), Positives = 27/30 (90%) Frame = +2 Query: 2 AILTASPDFSILATDVQTGATIARLDNAHE 91 AILT SPD ILATDV+TG+TIARLD+AHE Sbjct: 27 AILTGSPDCLILATDVETGSTIARLDDAHE 56 Score = 46.2 bits (108), Expect(2) = 4e-12 Identities = 19/24 (79%), Positives = 23/24 (95%) Frame = +1 Query: 160 AAVNRLVNLTETTIASGDDNGCIK 231 AA+NRL+NLTE+T+ASGDD GCIK Sbjct: 57 AAINRLINLTESTVASGDDEGCIK 80