BLASTX nr result

ID: Coptis25_contig00020140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020140
         (733 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263702.1| PREDICTED: uncharacterized protein LOC100267...   210   2e-52
ref|XP_002321017.1| predicted protein [Populus trichocarpa] gi|2...   207   2e-51
ref|XP_002531881.1| peripheral-type benzodiazepine receptor, put...   203   3e-50
ref|XP_002301472.1| predicted protein [Populus trichocarpa] gi|2...   200   2e-49
gb|AFH57280.1| putative peripheral-type benzodiazepine receptor ...   196   3e-48

>ref|XP_002263702.1| PREDICTED: uncharacterized protein LOC100267613 [Vitis vinifera]
          Length = 185

 Score =  210 bits (535), Expect = 2e-52
 Identities = 110/187 (58%), Positives = 129/187 (68%)
 Frame = -3

Query: 605 MASQNLKQRXXXXXXXXXXXXXXXXXXXXXXKMAMAKRGLRSLTIAIVLPLILTFITIYL 426
           MAS NLKQR                       MAMAKRGLRSLT A+ +PL LT +TIY 
Sbjct: 1   MASTNLKQRIKDGPSTPFPTNNTTKREKK---MAMAKRGLRSLTTAVSIPLSLTLVTIY- 56

Query: 425 FSRSGQNYYNLKRPFWFPSLWALHTGYIVSSLLMGLSAWLVWAEGGFHKQPSAVPLYLGQ 246
           FS +   Y  L +PFWFP LWA+H   + SSLLMGLSAWLVWAEGGFHK+P+A+PL++ Q
Sbjct: 57  FSGATDRYRTLPKPFWFPPLWAVHATSMASSLLMGLSAWLVWAEGGFHKKPTALPLFVAQ 116

Query: 245 LLLSLAWYPLVFKVGARWIGLFVCIGLFAALVGCSKRFREVNPIAGDLVKPCLAWVAYLT 66
           L LSL   P+VF  G   +GL VC+GLF ALVGC++ FREVNPIAGDLVKPCLAW AY+ 
Sbjct: 117 LALSLIRDPIVFGYGGTRVGLVVCMGLFGALVGCARMFREVNPIAGDLVKPCLAWTAYVG 176

Query: 65  LVNSKLL 45
           +V  KLL
Sbjct: 177 VVTLKLL 183


>ref|XP_002321017.1| predicted protein [Populus trichocarpa] gi|222861790|gb|EEE99332.1|
           predicted protein [Populus trichocarpa]
          Length = 199

 Score =  207 bits (527), Expect = 2e-51
 Identities = 98/160 (61%), Positives = 121/160 (75%), Gaps = 3/160 (1%)
 Frame = -3

Query: 509 MAMAKRGLRSLTIAIVLPLILTFITIYLFSRS---GQNYYNLKRPFWFPSLWALHTGYIV 339
           +AMAKRG+RSL IA+ LPL LT   +Y F  +   G +  ++  PFWFP  WALH   + 
Sbjct: 40  VAMAKRGIRSLAIAVALPLSLTISNLYFFGTTRGYGTSTGSISMPFWFPPPWALHLTCMT 99

Query: 338 SSLLMGLSAWLVWAEGGFHKQPSAVPLYLGQLLLSLAWYPLVFKVGARWIGLFVCIGLFA 159
           SS LMGLSAWLVWAEGGFH+ P+A+ LYL QL LSLAW P+VF++ A W+GL VC+  FA
Sbjct: 100 SSFLMGLSAWLVWAEGGFHRNPAALYLYLAQLGLSLAWEPIVFRMAAPWVGLLVCLATFA 159

Query: 158 ALVGCSKRFREVNPIAGDLVKPCLAWVAYLTLVNSKLLHL 39
            LVGCS++F+EVNPIAGDLVKPCLAW ++L +VN KLL L
Sbjct: 160 VLVGCSRQFKEVNPIAGDLVKPCLAWASFLAIVNLKLLFL 199


>ref|XP_002531881.1| peripheral-type benzodiazepine receptor, putative [Ricinus
           communis] gi|223528489|gb|EEF30518.1| peripheral-type
           benzodiazepine receptor, putative [Ricinus communis]
          Length = 190

 Score =  203 bits (516), Expect = 3e-50
 Identities = 97/158 (61%), Positives = 119/158 (75%), Gaps = 1/158 (0%)
 Frame = -3

Query: 509 MAMAKRGLRSLTIAIVLPLILTFITIYLF-SRSGQNYYNLKRPFWFPSLWALHTGYIVSS 333
           MAMAKRG+RSL IA+  PL LT   IY F SR+G    + K PFWFP +WALH   + SS
Sbjct: 34  MAMAKRGIRSLAIAVAFPLSLTLFNIYFFGSRNGYGPLSTK-PFWFPPMWALHFTCLASS 92

Query: 332 LLMGLSAWLVWAEGGFHKQPSAVPLYLGQLLLSLAWYPLVFKVGARWIGLFVCIGLFAAL 153
            LMGLSAWLVWAEGGFHK+P+A+  YL QL L L W P+VF++ A W+GL VC+ +F +L
Sbjct: 93  FLMGLSAWLVWAEGGFHKKPAALSFYLAQLGLGLIWDPIVFRMDATWVGLVVCLAMFGSL 152

Query: 152 VGCSKRFREVNPIAGDLVKPCLAWVAYLTLVNSKLLHL 39
           VGCS++F+EVNPIAGDLVKP L W A+L +VN KL+ L
Sbjct: 153 VGCSRQFKEVNPIAGDLVKPSLTWAAFLAIVNLKLVFL 190


>ref|XP_002301472.1| predicted protein [Populus trichocarpa]
           gi|224100985|ref|XP_002334319.1| predicted protein
           [Populus trichocarpa] gi|222843198|gb|EEE80745.1|
           predicted protein [Populus trichocarpa]
           gi|222870389|gb|EEF07520.1| predicted protein [Populus
           trichocarpa]
          Length = 197

 Score =  200 bits (509), Expect = 2e-49
 Identities = 94/161 (58%), Positives = 119/161 (73%), Gaps = 4/161 (2%)
 Frame = -3

Query: 509 MAMAKRGLRSLTIAIVLPLILTFITIYLFSRSG----QNYYNLKRPFWFPSLWALHTGYI 342
           +AMA+RG+RSL IA+ LPL L    +Y F  +      +  ++ +PFWFP LWALH   +
Sbjct: 37  VAMAQRGIRSLAIAVALPLSLALCNVYFFGSTKGYGTSSSRSISKPFWFPPLWALHMTCV 96

Query: 341 VSSLLMGLSAWLVWAEGGFHKQPSAVPLYLGQLLLSLAWYPLVFKVGARWIGLFVCIGLF 162
            SS LMGLSAWLVWAEGGFH+ P+A+ LYL QL LSLAW P+VF++ A W+GL VC+  F
Sbjct: 97  TSSFLMGLSAWLVWAEGGFHRNPTALYLYLTQLGLSLAWDPIVFRMSAPWVGLLVCLATF 156

Query: 161 AALVGCSKRFREVNPIAGDLVKPCLAWVAYLTLVNSKLLHL 39
            ALVGCS++F+EVNPIAG+LV PCLAW ++L  VN KLL L
Sbjct: 157 GALVGCSRQFKEVNPIAGNLVMPCLAWASFLAFVNLKLLFL 197


>gb|AFH57280.1| putative peripheral-type benzodiazepine receptor [Gossypium
           hirsutum]
          Length = 189

 Score =  196 bits (499), Expect = 3e-48
 Identities = 96/157 (61%), Positives = 115/157 (73%)
 Frame = -3

Query: 509 MAMAKRGLRSLTIAIVLPLILTFITIYLFSRSGQNYYNLKRPFWFPSLWALHTGYIVSSL 330
           MAMAKRGLRSL IA+  PL LT + IYLF  SG+ Y +L +PFWFP LW LHTG + SS 
Sbjct: 34  MAMAKRGLRSLVIAVSFPLSLTLLNIYLFG-SGRGYASLAKPFWFPPLWLLHTGCLASSF 92

Query: 329 LMGLSAWLVWAEGGFHKQPSAVPLYLGQLLLSLAWYPLVFKVGARWIGLFVCIGLFAALV 150
           LMGLSAW VW EGGFH +P+A+ LYLG L LS+AW+P V  +GA   GL V + +   LV
Sbjct: 93  LMGLSAWFVWVEGGFHVKPTALSLYLGYLGLSMAWHPTVLWMGASRAGLLVNLAMVGTLV 152

Query: 149 GCSKRFREVNPIAGDLVKPCLAWVAYLTLVNSKLLHL 39
           GCS+ FR+VNPIAG+ V PCLAW A+L  VN KL+ L
Sbjct: 153 GCSRDFRKVNPIAGNSVMPCLAWAAFLATVNLKLVFL 189


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