BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020139
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281257.2| PREDICTED: nuclear pore complex protein Nup1...   166   2e-39
ref|XP_003530891.1| PREDICTED: nuclear pore complex protein Nup1...   159   2e-37
ref|XP_003630944.1| Nuclear pore complex protein Nup155 [Medicag...   159   2e-37
ref|XP_003525230.1| PREDICTED: nuclear pore complex protein Nup1...   157   8e-37
gb|AAF79236.1|AC006917_21 F10B6.25 [Arabidopsis thaliana]             147   1e-33

>ref|XP_002281257.2| PREDICTED: nuclear pore complex protein Nup155-like [Vitis
           vinifera]
          Length = 1496

 Score =  166 bits (419), Expect = 2e-39
 Identities = 91/152 (59%), Positives = 107/152 (70%), Gaps = 1/152 (0%)
 Frame = -1

Query: 455 VAVLSDGRRMYIXXXXXXXXXXXXXXXXA-NTSQHRPCCLKVVMTRXXXXXXXXXXVTFG 279
           VAVLSDGRRMY+                  NTS H+P CLKVV TR          + FG
Sbjct: 342 VAVLSDGRRMYLSTAPSSGNSGAVGGLSGFNTSHHKPNCLKVVTTRPSPPLGVTGGLAFG 401

Query: 278 ALSLAGRSQTDDLSLKIETAYYSAGTTILSDSSPPTMSSLLIVKRDPSTQSSLAVGLGMS 99
           A+SL+ R+Q +DL+LK+E+AYYSAG  +LSDSSPPTMSSLLIV RD STQSS++ GLG +
Sbjct: 402 AISLSSRTQNEDLALKVESAYYSAGALVLSDSSPPTMSSLLIVGRDSSTQSSVSGGLGTT 461

Query: 98  GRGSRALRESVSTLPVEGRMLFVVDVAPMPEI 3
            R SRALRESVS+LPVEGRMLFV DV P P+I
Sbjct: 462 ARTSRALRESVSSLPVEGRMLFVADVLPSPDI 493


>ref|XP_003530891.1| PREDICTED: nuclear pore complex protein Nup155-like [Glycine max]
          Length = 1486

 Score =  159 bits (402), Expect = 2e-37
 Identities = 88/150 (58%), Positives = 103/150 (68%)
 Frame = -1

Query: 455 VAVLSDGRRMYIXXXXXXXXXXXXXXXXANTSQHRPCCLKVVMTRXXXXXXXXXXVTFGA 276
           VAVLSDGRRMY+                 NT+ H+P CLKVV TR          +TFGA
Sbjct: 342 VAVLSDGRRMYLSTSPSSGSLTGF-----NTNHHKPSCLKVVTTRPAPPWGVSGGLTFGA 396

Query: 275 LSLAGRSQTDDLSLKIETAYYSAGTTILSDSSPPTMSSLLIVKRDPSTQSSLAVGLGMSG 96
           ++LAGR Q +DLSLK+E AYYSAGT ILSD+SP TM SLL++ RD STQSS +  LG S 
Sbjct: 397 MALAGRPQNEDLSLKVEAAYYSAGTLILSDASPSTMPSLLVLNRDSSTQSSPSGNLGTST 456

Query: 95  RGSRALRESVSTLPVEGRMLFVVDVAPMPE 6
           R SRALRESVS+LPVEGRML V DV P+P+
Sbjct: 457 RSSRALRESVSSLPVEGRMLSVADVLPLPD 486


>ref|XP_003630944.1| Nuclear pore complex protein Nup155 [Medicago truncatula]
           gi|355524966|gb|AET05420.1| Nuclear pore complex protein
           Nup155 [Medicago truncatula]
          Length = 1484

 Score =  159 bits (402), Expect = 2e-37
 Identities = 87/150 (58%), Positives = 102/150 (68%)
 Frame = -1

Query: 455 VAVLSDGRRMYIXXXXXXXXXXXXXXXXANTSQHRPCCLKVVMTRXXXXXXXXXXVTFGA 276
           VAVLSDGRRMY+                 NTS H+P CLKVV TR          +TFG 
Sbjct: 342 VAVLSDGRRMYLSTSPSSGSLNGF-----NTSHHKPSCLKVVTTRPSPPWGVSGGLTFGT 396

Query: 275 LSLAGRSQTDDLSLKIETAYYSAGTTILSDSSPPTMSSLLIVKRDPSTQSSLAVGLGMSG 96
           ++LAGR Q +DLSLK+E AYYSAGT ILSD+SPPTM SLL++ RD STQSS +  LG   
Sbjct: 397 MALAGRPQNEDLSLKVEAAYYSAGTLILSDASPPTMPSLLVLNRDSSTQSSPSGNLGTGT 456

Query: 95  RGSRALRESVSTLPVEGRMLFVVDVAPMPE 6
           R SRALRE+VS+LPVEGRML V DV P+P+
Sbjct: 457 RSSRALRETVSSLPVEGRMLSVADVLPLPD 486


>ref|XP_003525230.1| PREDICTED: nuclear pore complex protein Nup155-like [Glycine max]
          Length = 1485

 Score =  157 bits (397), Expect = 8e-37
 Identities = 87/150 (58%), Positives = 103/150 (68%)
 Frame = -1

Query: 455 VAVLSDGRRMYIXXXXXXXXXXXXXXXXANTSQHRPCCLKVVMTRXXXXXXXXXXVTFGA 276
           VAVLSDGRRMY+                 NT+ H+P CLKVV TR          +TFGA
Sbjct: 342 VAVLSDGRRMYLSTSPSSGSLTGF-----NTNHHKPSCLKVVTTRPAPPWGVSGGLTFGA 396

Query: 275 LSLAGRSQTDDLSLKIETAYYSAGTTILSDSSPPTMSSLLIVKRDPSTQSSLAVGLGMSG 96
           ++LAGR   +DLSLK+E AYYSAGT ILSD+SP TMSSLL++ RD S+QSS +  LG S 
Sbjct: 397 MALAGRPPNEDLSLKVEAAYYSAGTLILSDASPSTMSSLLVLNRDSSSQSSPSGNLGTST 456

Query: 95  RGSRALRESVSTLPVEGRMLFVVDVAPMPE 6
           R SRALRESVS+LPVEGRML V DV P+P+
Sbjct: 457 RSSRALRESVSSLPVEGRMLSVADVLPLPD 486


>gb|AAF79236.1|AC006917_21 F10B6.25 [Arabidopsis thaliana]
          Length = 1475

 Score =  147 bits (370), Expect = 1e-33
 Identities = 83/150 (55%), Positives = 93/150 (62%)
 Frame = -1

Query: 455 VAVLSDGRRMYIXXXXXXXXXXXXXXXXANTSQHRPCCLKVVMTRXXXXXXXXXXVTFGA 276
           VA LSDGRRMY+                 N  Q  P CLKVV TR          + FGA
Sbjct: 339 VAALSDGRRMYLSTSSSGSGSTISFSGFNNHRQ-TPNCLKVVSTRPSPPLGVGVGLGFGA 397

Query: 275 LSLAGRSQTDDLSLKIETAYYSAGTTILSDSSPPTMSSLLIVKRDPSTQSSLAVGLGMSG 96
            S+AGR+Q DDLS+KIETAYYS GT +LSDSSPP MSSLL+V RD S  S      G S 
Sbjct: 398 ASVAGRTQNDDLSMKIETAYYSVGTLVLSDSSPPAMSSLLVVSRDSSVHSQAGSSSGPSS 457

Query: 95  RGSRALRESVSTLPVEGRMLFVVDVAPMPE 6
           R SRALRE VS+LP+EGRMLFV DV P P+
Sbjct: 458 RSSRALREVVSSLPIEGRMLFVADVLPSPD 487