BLASTX nr result

ID: Coptis25_contig00020137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020137
         (1946 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]                 149   3e-33
ref|XP_002329042.1| predicted protein [Populus trichocarpa] gi|2...   142   2e-31
ref|XP_003555102.1| PREDICTED: uncharacterized protein LOC100796...   136   2e-29
ref|XP_003537359.1| PREDICTED: uncharacterized protein LOC100786...   136   2e-29
ref|XP_003544056.1| PREDICTED: uncharacterized protein LOC100810...   132   3e-28

>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
          Length = 1518

 Score =  149 bits (376), Expect = 3e-33
 Identities = 77/260 (29%), Positives = 133/260 (51%), Gaps = 28/260 (10%)
 Frame = -2

Query: 712 IKLDVPEFDGKLQPDAFVDWLNKIEKVFDYKNFEDPKCVKLVATKLTGYALVWWDELQLT 533
           IK+++PEF G L PD  ++W+  +EK+F+YKN+ D K  K+   KL GYA +W+D L+  
Sbjct: 90  IKVEIPEFSGSLNPDDLLEWIRDVEKIFEYKNYNDVKACKVAVLKLKGYASLWYDNLKHQ 149

Query: 532 RAKLGYNKITTWDKMRRELKKEFIPHDYERDLFMRLQNLKQRLQSVAGYTEEFLLLCTRA 353
           R K G + + +W K+++++  +F+  DY +DLF++L NLKQ+ ++V  Y  EF  L  + 
Sbjct: 150 RLKEGKDPLRSWSKLKKKMLAKFVTKDYTQDLFIKLSNLKQKEKTVEAYLREFEQLTLQC 209

Query: 352 DLSESVD*KIGRYLNGLRKPLREALAFKDVYDMSDAIKYALKAEDLLRXXXXXXXXXXXX 173
           +++E  + +I R+L GL K +   +  + ++   D +  +L+ E + +            
Sbjct: 210 EINEKSEQRIARFLEGLDKNIAAEVRMQPLWSYDDVVNLSLRVEKMGKTKPVATRPKPVF 269

Query: 172 XXXXXSK---PPPT---------------RVGP------ITCYECKEIGHVRSDCPKRKR 65
                 K   PP T               ++ P      I C++C+  GH R DCP  + 
Sbjct: 270 RPYSSVKINDPPKTTPQSTVDKGKAPMNPKINPPLSRDKIKCFQCQGFGHFRKDCPSART 329

Query: 64  VGLTQ----DEENLTHPEED 17
           +   +    + E L   EED
Sbjct: 330 LTAIEVAEWEREGLVEYEED 349


>ref|XP_002329042.1| predicted protein [Populus trichocarpa] gi|222839713|gb|EEE78036.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  142 bits (359), Expect = 2e-31
 Identities = 86/275 (31%), Positives = 137/275 (49%), Gaps = 38/275 (13%)
 Frame = -2

Query: 712 IKLDVPEFDGKLQPDAFVDWLNKIEKVFDYKNFEDPKCVKLVATKLTGYALVWWDELQLT 533
           +K+D+PEF   LQ D ++DW+N +++V ++K   + + V LVAT+L G A  WW +++ T
Sbjct: 87  LKVDIPEFHVGLQADEYLDWINTVDEVLEFKQVPEDRRVALVATRLRGRAGAWWQQVKKT 146

Query: 532 RAKLGYNKITTWDKMRRELKKEFIPHDYERDLFMRLQNLKQRLQSVAGYTEEFLLLCTRA 353
           R   G  KIT WDKM++ ++  F+P++Y R L+ RLQNL+Q  +SV  YT EF  L +R 
Sbjct: 147 RTLQGKGKITCWDKMKKNMRSAFLPYNYTRTLYQRLQNLRQGNRSVDDYTTEFYQLVSRD 206

Query: 352 DLSESVD*KIGRYLNGLRKPLREALAFKDVYDMSDAIKYALKAE-DLLRXXXXXXXXXXX 176
            ++E  + ++ RY+  LR   ++ L   DV  +SDA + A++ E  L+R           
Sbjct: 207 AIAEDEESRVVRYIGRLRIQFQDVLNMFDVLSVSDAHQRAVQLEKQLVRRNTGGLNFGGS 266

Query: 175 XXXXXXSK-------------------------PP-----PTRVGPIT-------CYECK 107
                 +                          PP     PT    +T       C+ C 
Sbjct: 267 GANTSNNSGRTGSMNFGGTGAGSASSSSTRTAIPPSPITKPTMPTHVTTPNTGFRCFNCG 326

Query: 106 EIGHVRSDCPKRKRVGLTQDEENLTHPEEDVTEID 2
           E+GH  ++C K +R GL  D E +   +E   E +
Sbjct: 327 ELGHRFAECKKGQRRGLFSDVEEINREQEGDVEAE 361


>ref|XP_003555102.1| PREDICTED: uncharacterized protein LOC100796026 [Glycine max]
          Length = 1109

 Score =  136 bits (343), Expect = 2e-29
 Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 36/276 (13%)
 Frame = -2

Query: 730 KNQMGDIKLDVPEFDGKLQPDAFVDWLNKIEKVFDYKNFEDPKCVKLVATKLTGYALVWW 551
           +N++  IKL++P F GK  P+A+++W  KIE VF   N+E+ + VKL AT+ + YALVWW
Sbjct: 47  QNRIDGIKLNIPPFKGKNDPEAYLEWEMKIEHVFSCNNYEEDQKVKLAATEFSDYALVWW 106

Query: 550 DELQLTRAKLGYNKITTWDKMRRELKKEFIPHDYERDLFMRLQNLKQRLQSVAGYTEEFL 371
           ++LQ  RA+     + TW +M++ ++K ++P  Y RDL  +LQ L Q  + V  Y +E  
Sbjct: 107 NKLQKERARNEEPMVDTWTEMKKIMRKRYVPASYSRDLKFKLQKLTQGNKGVEEYFKEMD 166

Query: 370 LLCTRADLSESVD*KIGRYLNGLRKPLREALAFKDVYDMSDAIKYALKAEDLLR------ 209
           +L  +A++ E  +  + R+LNGL   + + +  ++  +M D +  A++ E  L+      
Sbjct: 167 VLMIQANIEEDEEVTMARFLNGLTNDIHDIVELQEFVEMDDLLHKAIQVEQQLKRKGVAK 226

Query: 208 --------------------XXXXXXXXXXXXXXXXXSKPPPTRVGPITCYECKEIGHVR 89
                                                 + P  R   + C++C+ +GH  
Sbjct: 227 RSFTNFGSSSWKDKGKKDGAATSSSSTPIPSKTRSKSQEEPSKRSRDVKCFKCQGLGHYA 286

Query: 88  SDCPKRKRVGL----------TQDEENLTHPEEDVT 11
            +CP ++ + L           ++EE   + EE+ T
Sbjct: 287 YECPNKRSMVLRDGEYISESDVEEEEESEYVEEEET 322


>ref|XP_003537359.1| PREDICTED: uncharacterized protein LOC100786304 [Glycine max]
          Length = 1317

 Score =  136 bits (342), Expect = 2e-29
 Identities = 75/283 (26%), Positives = 140/283 (49%), Gaps = 36/283 (12%)
 Frame = -2

Query: 751  RLLRILEKNQMGDIKLDVPEFDGKLQPDAFVDWLNKIEKVFDYKNFEDPKCVKLVATKLT 572
            +++++  +N++  IKL++P F GK   +A+++W  KIE VF   N+E+ + VKL AT+ +
Sbjct: 399  KMMQLKRQNRIDGIKLNIPPFKGKNDLEAYLEWEMKIEHVFSCNNYEEDQKVKLAATEFS 458

Query: 571  GYALVWWDELQLTRAKLGYNKITTWDKMRRELKKEFIPHDYERDLFMRLQNLKQRLQSVA 392
             YALVWW++LQ  RA+     + TW +M++ ++K ++P  Y RDL  +LQ L Q  + V 
Sbjct: 459  DYALVWWNKLQKERARNEEPMVDTWTEMKKIMRKRYVPASYSRDLKFKLQKLTQGNKGVE 518

Query: 391  GYTEEFLLLCTRADLSESVD*KIGRYLNGLRKPLREALAFKDVYDMSDAIKYALKAEDLL 212
             Y +E  +L  +A++ E  +  + R+LNGL   +R+ +  ++  +M D +  A++ E  L
Sbjct: 519  EYFKEMDVLMIQANIEEDEEVTMARFLNGLTNDIRDIVELQEFVEMDDLLHKAIQVEQQL 578

Query: 211  R--------------------------XXXXXXXXXXXXXXXXXSKPPPTRVGPITCYEC 110
            +                                            + P  +   + C++C
Sbjct: 579  KRKGVAKRSFTNFGSSSWKDKGKKDGAATSSSSTPIPSKTRSKSQEEPSKKSRDVKCFKC 638

Query: 109  KEIGHVRSDCPKRKRVGL----------TQDEENLTHPEEDVT 11
            + +GH   +CP ++ + L           ++EE   + EE+ T
Sbjct: 639  QGLGHYAYECPNKRSMVLRDGEYISESDVEEEEESEYVEEEET 681


>ref|XP_003544056.1| PREDICTED: uncharacterized protein LOC100810263 [Glycine max]
          Length = 1150

 Score =  132 bits (332), Expect = 3e-28
 Identities = 75/276 (27%), Positives = 134/276 (48%), Gaps = 36/276 (13%)
 Frame = -2

Query: 730 KNQMGDIKLDVPEFDGKLQPDAFVDWLNKIEKVFDYKNFEDPKCVKLVATKLTGYALVWW 551
           +N++  IKL++P F GK  P+A+++W  KIE VF   N+E+ + VKL AT+ + YALVWW
Sbjct: 47  QNRIDGIKLNIPPFKGKNDPEAYLEWEMKIEHVFSCNNYEEDQKVKLAATEFSDYALVWW 106

Query: 550 DELQLTRAKLGYNKITTWDKMRRELKKEFIPHDYERDLFMRLQNLKQRLQSVAGYTEEFL 371
           ++LQ  RA+     + TW +M++ ++K ++P  Y RDL  +LQ L Q  + V  Y +E  
Sbjct: 107 NKLQKERARNEEPMVDTWTEMKKIMRKRYVPASYSRDLKFKLQKLTQGNKGVEEYFKEMD 166

Query: 370 LLCTRADLSESVD*KIGRYLNGLRKPLREALAFKDVYDMSDAIKYALKAEDLLR------ 209
           +L  + ++ E  +  + R+LNGL   +R+ +  ++  +M D +  A++ E  L+      
Sbjct: 167 VLMIQENIEEDEEVTMARFLNGLTNDIRDIVELQEFVEMDDLLHKAIQVEQQLKRKGVAK 226

Query: 208 --------------------XXXXXXXXXXXXXXXXXSKPPPTRVGPITCYECKEIGHVR 89
                                                 + P  R   + C++C+ +GH  
Sbjct: 227 RSFTNFGSSSWKDKGKKDGAATSSSSTPIPSKTRSKSQEEPSKRSRDVKCFKCQGLGHYA 286

Query: 88  SDCPKRKRVGL----------TQDEENLTHPEEDVT 11
            + P ++ + L           ++EE   + EE+ T
Sbjct: 287 YEFPNKRSMVLRDGEYISESDVEEEEESEYVEEEET 322