BLASTX nr result

ID: Coptis25_contig00020136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020136
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR67407.1| integrase [Cucumis melo subsp. melo]                    65   4e-09
ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    57   2e-06

>gb|ABR67407.1| integrase [Cucumis melo subsp. melo]
          Length = 1281

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 47/112 (41%), Positives = 65/112 (58%)
 Frame = -1

Query: 430 LLSN*D*MGKNQKGLEKILTKHDLQA*LYFLVVIEESNDLSTLFLDGLIGSVQSHGL*LK 251
           L SN + +G +Q+ +EKIL     +   + +V IEES DLSTL ++ L+GS+QSH L LK
Sbjct: 147 LRSNGEEVG-DQRVVEKILRSMPRKF-EHIVVAIEESKDLSTLSINSLMGSLQSHELRLK 204

Query: 250 QLDSSPIEPFQPQTSFRGILEDERVYNRGRGWSSHNEKRGQREYYSHRNTSN 95
           Q D +P E FQ QTSFRG           RG    + +RG    Y +R+ +N
Sbjct: 205 QFDVNPEEAFQMQTSFRG---------GSRGRRGGHGRRGGGRNYDNRSGAN 247


>ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101216349 [Cucumis sativus]
          Length = 1830

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
 Frame = -1

Query: 403 KNQKGLEKILTKHDLQA*LYFLVVIEESNDLSTLFLDGLIGSVQSHGL*LKQLDSSPI-E 227
           ++Q+ +EKIL     +   + +V IEES DLSTL ++ L+GS+QSH L LK  DS+P  E
Sbjct: 153 EDQRIVEKILRSMTRRY-EHIVVAIEESKDLSTLSINSLMGSLQSHELRLKMFDSTPSEE 211

Query: 226 PFQPQTSFRGILEDERVYNRGRG 158
            F  Q+S+RG     R    GRG
Sbjct: 212 AFHMQSSYRGRSNGRRGGRGGRG 234


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