BLASTX nr result

ID: Coptis25_contig00020132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020132
         (1422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282498.1| PREDICTED: uncharacterized protein LOC100247...   255   2e-65
emb|CAN66264.1| hypothetical protein VITISV_041371 [Vitis vinifera]   255   2e-65
ref|XP_002514146.1| conserved hypothetical protein [Ricinus comm...   235   2e-59
ref|XP_002277676.1| PREDICTED: transcription factor MYB1R1 [Viti...   232   2e-58
gb|AFK44275.1| unknown [Lotus japonicus]                              227   5e-57

>ref|XP_002282498.1| PREDICTED: uncharacterized protein LOC100247499 [Vitis vinifera]
           gi|297738685|emb|CBI27930.3| unnamed protein product
           [Vitis vinifera]
          Length = 297

 Score =  255 bits (652), Expect = 2e-65
 Identities = 154/298 (51%), Positives = 188/298 (63%), Gaps = 7/298 (2%)
 Frame = +1

Query: 121 MGRKCSHCGILGHNLRTCATYRGGTAVLGGVRLFGVQLDIASS-LPMKKSFSMGCXXXXX 297
           MGRKCSHCG +GHN RTC +Y+G   V+GG+RLFGVQLD++SS + MKKSFSM       
Sbjct: 1   MGRKCSHCGNIGHNSRTCISYKG--TVVGGLRLFGVQLDLSSSSIAMKKSFSMESLPSSL 58

Query: 298 XXXXXXXXXXXXXXRVPVTENLEKMSNGYLSDGLISRNQEKKKGIPWTEEEHRTFLAGLE 477
                         RV + EN +K  NGYLSDGLI+R+QE+KKG+PWTEEEHRTFLAGLE
Sbjct: 59  ASSPSPSSSLCSS-RVSMDENSDKAMNGYLSDGLIARSQERKKGVPWTEEEHRTFLAGLE 117

Query: 478 KLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRQISLDKKKRRSSLFDMVKGIEMDEHKV 657
           KLGKGDWRGIS+NFVTTRTPTQVASHAQKYFLRQ +L KKKRRSSLFDMV    M    V
Sbjct: 118 KLGKGDWRGISRNFVTTRTPTQVASHAQKYFLRQATLSKKKRRSSLFDMVGNSNMAGQHV 177

Query: 658 STIDSKTNDSSPISCEFFSIPTKSSNNTAAYSEVDKDRTLH-SIDLNLQDQVSRFNSQET 834
            +   K +D          IPT+  N  ++  E  ++ +L   IDLN   +V + ++ ET
Sbjct: 178 YSFCPKPSD---------HIPTQYLNIASSQYEGRQETSLPLQIDLNSSGKVIKSDNPET 228

Query: 835 GGLHFLPCLHSMSVWAYESSDAQ----SPVKHTSPN-VTSDLELTLGTPLALDMNKPS 993
                 P  +++ VW Y   D++    +  K   PN V  DLELTL  P   D  K S
Sbjct: 229 DHSQLPPSHNTVPVWLYGLIDSRPQPAAATKPVPPNAVPDDLELTL-APRPRDRKKSS 285


>emb|CAN66264.1| hypothetical protein VITISV_041371 [Vitis vinifera]
          Length = 297

 Score =  255 bits (652), Expect = 2e-65
 Identities = 154/298 (51%), Positives = 188/298 (63%), Gaps = 7/298 (2%)
 Frame = +1

Query: 121 MGRKCSHCGILGHNLRTCATYRGGTAVLGGVRLFGVQLDIASS-LPMKKSFSMGCXXXXX 297
           MGRKCSHCG +GHN RTC +Y+G   V+GG+RLFGVQLD++SS + MKKSFSM       
Sbjct: 1   MGRKCSHCGNIGHNSRTCISYKG--TVVGGLRLFGVQLDLSSSSIAMKKSFSMESLPSSL 58

Query: 298 XXXXXXXXXXXXXXRVPVTENLEKMSNGYLSDGLISRNQEKKKGIPWTEEEHRTFLAGLE 477
                         RV + EN +K  NGYLSDGLI+R+QE+KKG+PWTEEEHRTFLAGLE
Sbjct: 59  ASSPSPSSSLCSS-RVSMDENSDKAMNGYLSDGLIARSQERKKGVPWTEEEHRTFLAGLE 117

Query: 478 KLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRQISLDKKKRRSSLFDMVKGIEMDEHKV 657
           KLGKGDWRGIS+NFVTTRTPTQVASHAQKYFLRQ +L KKKRRSSLFDMV    M    V
Sbjct: 118 KLGKGDWRGISRNFVTTRTPTQVASHAQKYFLRQATLSKKKRRSSLFDMVGNSNMAGXHV 177

Query: 658 STIDSKTNDSSPISCEFFSIPTKSSNNTAAYSEVDKDRTLH-SIDLNLQDQVSRFNSQET 834
            +   K +D          IPT+  N  ++  E  ++ +L   IDLN   +V + ++ ET
Sbjct: 178 YSFCPKPSD---------HIPTQYLNIASSQYEGXQETSLPLQIDLNSSGKVIKSDNPET 228

Query: 835 GGLHFLPCLHSMSVWAYESSDAQ----SPVKHTSPN-VTSDLELTLGTPLALDMNKPS 993
                 P  +++ VW Y   D++    +  K   PN V  DLELTL  P   D  K S
Sbjct: 229 DHSQLPPSHNTVPVWLYGLIDSRPQPAAATKPVPPNAVPDDLELTL-APRPRDRKKSS 285


>ref|XP_002514146.1| conserved hypothetical protein [Ricinus communis]
           gi|223546602|gb|EEF48100.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 285

 Score =  235 bits (599), Expect = 2e-59
 Identities = 141/298 (47%), Positives = 171/298 (57%), Gaps = 7/298 (2%)
 Frame = +1

Query: 121 MGRKCSHCGILGHNLRTCATYRGGTAV--LGGVRLFGVQLDIA-----SSLPMKKSFSMG 279
           MGRKCSHCG +GHN RTC  YRG   V   GG+RLFGVQ D++     SSL MKKSFSM 
Sbjct: 1   MGRKCSHCGNIGHNSRTCTNYRGTAVVGGAGGLRLFGVQFDLSTSSSSSSLSMKKSFSMD 60

Query: 280 CXXXXXXXXXXXXXXXXXXXRVPVTENLEKMSNGYLSDGLISRNQEKKKGIPWTEEEHRT 459
           C                    V    N ++ S GYLSDGL+ R QE+KKG+PWTEEEHRT
Sbjct: 61  CLSSSSSSSPSSSLCSSRLSNVD-DNNPDRTSTGYLSDGLLGRVQERKKGVPWTEEEHRT 119

Query: 460 FLAGLEKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRQISLDKKKRRSSLFDMVKGIE 639
           FL GLEKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLR  SL+KKKRRSSLFDMV    
Sbjct: 120 FLIGLEKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRLASLNKKKRRSSLFDMV---- 175

Query: 640 MDEHKVSTIDSKTNDSSPISCEFFSIPTKSSNNTAAYSEVDKDRTLHSIDLNLQDQVSRF 819
                     + TN          +I  +SS++ +++   D  + L+S   ++       
Sbjct: 176 ---------HTNTN---------INIYVRSSSSRSSHPVTDNSKCLNSCKQSVNTTTDVN 217

Query: 820 NSQETGGLHFLPCLHSMSVWAYESSDAQSPVKHTSPNVTSDLELTLGTPLALDMNKPS 993
              +    H L   H        S  +Q P+  ++     DLELTL +P +L+  KPS
Sbjct: 218 QETDCHHHHRLSSCHHFLPLPKPSKTSQ-PMSSSNVVAPDDLELTLASPTSLEGKKPS 274


>ref|XP_002277676.1| PREDICTED: transcription factor MYB1R1 [Vitis vinifera]
           gi|296081626|emb|CBI20631.3| unnamed protein product
           [Vitis vinifera]
          Length = 211

 Score =  232 bits (591), Expect = 2e-58
 Identities = 126/214 (58%), Positives = 148/214 (69%), Gaps = 7/214 (3%)
 Frame = +1

Query: 121 MGRKCSHCGILGHNLRTCATYRGGTAV-----LGGVRLFGVQLDIASS--LPMKKSFSMG 279
           MGRKCSHCG +GHN RTC T RG + V      GGV+LFGVQL++ S+  LPMKKSFS+ 
Sbjct: 1   MGRKCSHCGNIGHNSRTCTTLRGSSGVSSSSLTGGVKLFGVQLEMPSTTPLPMKKSFSLD 60

Query: 280 CXXXXXXXXXXXXXXXXXXXRVPVTENLEKMSNGYLSDGLISRNQEKKKGIPWTEEEHRT 459
           C                   RV   EN +K S GYLSDGLI+R QE+KKG+PWTEEEHRT
Sbjct: 61  CLPSSSSTPSSSTSS-----RVSADENSDKFSRGYLSDGLIARTQERKKGVPWTEEEHRT 115

Query: 460 FLAGLEKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRQISLDKKKRRSSLFDMVKGIE 639
           FL GLEKLG+GDWRGIS+NFVTTRTPTQVASHAQKYFLRQ SL+KKKRR SLFD+V+  +
Sbjct: 116 FLLGLEKLGRGDWRGISRNFVTTRTPTQVASHAQKYFLRQSSLNKKKRRPSLFDLVESSK 175

Query: 640 MDEHKVSTIDSKTNDSSPISCEFFSIPTKSSNNT 741
              H V+    + N  S I C F     K++N+T
Sbjct: 176 FSFHLVNPSIPQPNQPS-IPCGF---SLKTTNST 205


>gb|AFK44275.1| unknown [Lotus japonicus]
          Length = 277

 Score =  227 bits (579), Expect = 5e-57
 Identities = 139/294 (47%), Positives = 171/294 (58%)
 Frame = +1

Query: 121  MGRKCSHCGILGHNLRTCATYRGGTAVLGGVRLFGVQLDIASSLPMKKSFSMGCXXXXXX 300
            MGRKCSHCGI+GHN RTC +   G+ V  GVRLFGVQLDI+S L MKKSFSM        
Sbjct: 1    MGRKCSHCGIIGHNSRTCTSLIRGSFV--GVRLFGVQLDISSCLTMKKSFSMDSLPLPSS 58

Query: 301  XXXXXXXXXXXXXRVPVTENLEKMSNGYLSDGLISRNQEKKKGIPWTEEEHRTFLAGLEK 480
                         R+ V EN  + S GYLSDGLI+  QE+KKG+PWTEEEHRTFL GLEK
Sbjct: 59   SSSPSSSFCSS--RITVEENYGRTSFGYLSDGLIAGAQERKKGVPWTEEEHRTFLIGLEK 116

Query: 481  LGKGDWRGISKNFVTTRTPTQVASHAQKYFLRQISLDKKKRRSSLFDMVKGIEMDEHKVS 660
            LGKGDWRGIS+N+VTTRTPTQVASHAQKYF+R   ++KKKRRSSLFDM+          S
Sbjct: 117  LGKGDWRGISRNYVTTRTPTQVASHAQKYFIRLAMMNKKKRRSSLFDMI-------GSKS 169

Query: 661  TIDSKTNDSSPISCEFFSIPTKSSNNTAAYSEVDKDRTLHSIDLNLQDQVSRFNSQETGG 840
            T  +   +SS  SC         +    +  EV+KD TL  +    Q+  S  + ++  G
Sbjct: 170  TKTTPHPNSSSDSC---------NQQVKSKCEVEKDATLSLLTSFQQETKSDDDDEKKTG 220

Query: 841  LHFLPCLHSMSVWAYESSDAQSPVKHTSPNVTSDLELTLGTPLALDMNKPSMPP 1002
                           E+S+   P+  +S  V  DL+LTL  P    + +P   P
Sbjct: 221  --------DDRYSNVEASETAEPMWLSSNAVGPDLQLTLAAPKVNTLEQPKSSP 266


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