BLASTX nr result

ID: Coptis25_contig00020131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020131
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263918.1| PREDICTED: uncharacterized protein LOC100261...    65   8e-09
emb|CAN76723.1| hypothetical protein VITISV_042980 [Vitis vinifera]    64   2e-08
ref|XP_003544346.1| PREDICTED: uncharacterized protein LOC100805...    60   2e-07
ref|XP_002530557.1| hypothetical protein RCOM_0303940 [Ricinus c...    59   5e-07
emb|CBI24021.3| unnamed protein product [Vitis vinifera]               58   7e-07

>ref|XP_002263918.1| PREDICTED: uncharacterized protein LOC100261489 [Vitis vinifera]
          Length = 710

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 48/111 (43%), Positives = 60/111 (54%), Gaps = 38/111 (34%)
 Frame = +1

Query: 1   SRSPGRRSETP-TTMATTSDKS------------KPGKMVSVPAS--------------- 96
           SRSPGRRS+ P TT A  ++K+            +PGKMVSVPA+               
Sbjct: 251 SRSPGRRSDNPPTTSAEAAEKASSHANAGCSNATRPGKMVSVPATVIDKGNNGSSGVESG 310

Query: 97  -NGAIKRVSVKR--------ATASPRSQSPANAR-ASNEQLVPQPSLSRNS 219
            NGA++RV VKR         + +PRS+SPANAR  SN+     PSLSRNS
Sbjct: 311 NNGAVRRVLVKRNSGEVAASGSKTPRSRSPANARVVSNDSQNQHPSLSRNS 361


>emb|CAN76723.1| hypothetical protein VITISV_042980 [Vitis vinifera]
          Length = 685

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 48/111 (43%), Positives = 59/111 (53%), Gaps = 38/111 (34%)
 Frame = +1

Query: 1   SRSPGRRSETP-TTMATTSDKS------------KPGKMVSVPAS--------------- 96
           SRSPGRRS+ P TT A  ++K+            +PGKMVSVPA+               
Sbjct: 251 SRSPGRRSDNPPTTSAEAAEKASSHANAGCSNATRPGKMVSVPATVIDKGNNGSSGVESG 310

Query: 97  -NGAIKRVSVKR--------ATASPRSQSPANAR-ASNEQLVPQPSLSRNS 219
            NGA++RV VKR         + +PRS+SPANAR  SN      PSLSRNS
Sbjct: 311 NNGAVRRVLVKRNSGEVAASGSKTPRSRSPANARVVSNXNQNQHPSLSRNS 361


>ref|XP_003544346.1| PREDICTED: uncharacterized protein LOC100805280 [Glycine max]
          Length = 751

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 45/106 (42%), Positives = 59/106 (55%), Gaps = 33/106 (31%)
 Frame = +1

Query: 1   SRSPGRRS-ETPTTMATTSD-KSKPGKMVSVPASNGAI--------------KRVSVK-- 126
           SRSPGRRS +T TT A+ ++  S+PGKMVSVPA+  ++              KR++VK  
Sbjct: 233 SRSPGRRSSDTNTTNASNNNTSSRPGKMVSVPATVSSLVMDKSNNCGGESGAKRITVKRN 292

Query: 127 ------RATASPRSQSPANARAS---------NEQLVPQPSLSRNS 219
                 R TASPR+QSPA    +         N+Q   QPSLSRN+
Sbjct: 293 VGDAGSRGTASPRAQSPARVNGNVGRDKVLNENQQHQQQPSLSRNN 338


>ref|XP_002530557.1| hypothetical protein RCOM_0303940 [Ricinus communis]
           gi|223529895|gb|EEF31825.1| hypothetical protein
           RCOM_0303940 [Ricinus communis]
          Length = 725

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 50/113 (44%), Positives = 59/113 (52%), Gaps = 40/113 (35%)
 Frame = +1

Query: 1   SRSPGRRSETPT-------TMATTSDKSKPGK-MVSVPAS------------------NG 102
           SRSPGRRSET         T + TS+ ++PGK MVSVPA+                  NG
Sbjct: 261 SRSPGRRSETNPIANPSNGTGSDTSNNNRPGKKMVSVPATVSSLTMDKSNIGVEPQAANG 320

Query: 103 AIKRVSVKR----------ATASPRSQSPANARA----SNEQLVPQPSLSRNS 219
            +KR+SVKR          + ASPRSQSPA   A    SNE    QPSLSR+S
Sbjct: 321 -VKRISVKRNVGGGEAGSRSAASPRSQSPARTNAKGGGSNENNQQQPSLSRSS 372


>emb|CBI24021.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 42/92 (45%), Positives = 53/92 (57%), Gaps = 19/92 (20%)
 Frame = +1

Query: 1   SRSPGRRSETP-TTMATTSDKS------------KPGKMVSVPAS-----NGAIKRVSVK 126
           SRSPGRRS+ P TT A  ++K+            +PGKMVSVPA+     N     V+  
Sbjct: 208 SRSPGRRSDNPPTTSAEAAEKASSHANAGCSNATRPGKMVSVPATVIDKGNNGSSGVAAS 267

Query: 127 RATASPRSQSPANAR-ASNEQLVPQPSLSRNS 219
             + +PRS+SPANAR  SN+     PSLSRNS
Sbjct: 268 -GSKTPRSRSPANARVVSNDSQNQHPSLSRNS 298


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