BLASTX nr result
ID: Coptis25_contig00020129
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00020129 (238 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003528792.1| PREDICTED: uncharacterized protein LOC100808... 76 3e-12 ref|XP_003548395.1| PREDICTED: protein TIF31 homolog [Glycine max] 72 4e-11 ref|XP_002523351.1| eukaryotic translation initiation factor 3 s... 71 1e-10 ref|XP_002278370.2| PREDICTED: protein KIAA0664 homolog [Vitis v... 70 2e-10 emb|CBI40528.3| unnamed protein product [Vitis vinifera] 70 2e-10 >ref|XP_003528792.1| PREDICTED: uncharacterized protein LOC100808136 [Glycine max] Length = 1840 Score = 75.9 bits (185), Expect = 3e-12 Identities = 45/77 (58%), Positives = 49/77 (63%) Frame = +1 Query: 7 GPKFSRKVVKSVTYRVKSVPLSSKPVDKSRNESALSNPSSEPFQTSTPHEVDPASQSSSI 186 G KF RKVVK+VTYRVKSVP +SKP + E+ SS P P D SI Sbjct: 1298 GTKFGRKVVKAVTYRVKSVPSTSKPCVNEKLENGDKLLSSLP----EPDPTDANPVKKSI 1353 Query: 187 VSLGKSPSYKEVALAPP 237 VSLGKSPSYKEVALAPP Sbjct: 1354 VSLGKSPSYKEVALAPP 1370 >ref|XP_003548395.1| PREDICTED: protein TIF31 homolog [Glycine max] Length = 1846 Score = 72.4 bits (176), Expect = 4e-11 Identities = 43/77 (55%), Positives = 49/77 (63%) Frame = +1 Query: 7 GPKFSRKVVKSVTYRVKSVPLSSKPVDKSRNESALSNPSSEPFQTSTPHEVDPASQSSSI 186 G KF RKVVK+VTYRVKS+P +SKP E+ SS P P +D +S Sbjct: 1305 GNKFGRKVVKAVTYRVKSMPSTSKPCANETLENGDKLLSSLP----EPDPIDANPVKNSK 1360 Query: 187 VSLGKSPSYKEVALAPP 237 VSLGKSPSYKEVALAPP Sbjct: 1361 VSLGKSPSYKEVALAPP 1377 >ref|XP_002523351.1| eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis] gi|223537439|gb|EEF39067.1| eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis] Length = 1872 Score = 70.9 bits (172), Expect = 1e-10 Identities = 41/78 (52%), Positives = 50/78 (64%), Gaps = 1/78 (1%) Frame = +1 Query: 7 GPKFSRKVVKSVTYRVKSVPLSSKPVDKSRNESALSNPSS-EPFQTSTPHEVDPASQSSS 183 G KF R++VK+VTYRVKS+P +K ++S + SS E Q S D SS Sbjct: 1322 GTKFGRRIVKAVTYRVKSIPSVNKTAPTENSKSGVKTFSSLESAQLSASS--DAGQVKSS 1379 Query: 184 IVSLGKSPSYKEVALAPP 237 +VSLGKSPSYKEVALAPP Sbjct: 1380 VVSLGKSPSYKEVALAPP 1397 >ref|XP_002278370.2| PREDICTED: protein KIAA0664 homolog [Vitis vinifera] Length = 1863 Score = 69.7 bits (169), Expect = 2e-10 Identities = 41/77 (53%), Positives = 49/77 (63%) Frame = +1 Query: 7 GPKFSRKVVKSVTYRVKSVPLSSKPVDKSRNESALSNPSSEPFQTSTPHEVDPASQSSSI 186 G KF R++VK+VTYRVKSVP S+K K E S P+++ P SQ S+ Sbjct: 1320 GTKFGRRIVKAVTYRVKSVP-STKTATKL-----------ETGTISAPNDMSPISQKKSV 1367 Query: 187 VSLGKSPSYKEVALAPP 237 VSLGKS SYKEVALAPP Sbjct: 1368 VSLGKSLSYKEVALAPP 1384 >emb|CBI40528.3| unnamed protein product [Vitis vinifera] Length = 1446 Score = 69.7 bits (169), Expect = 2e-10 Identities = 41/77 (53%), Positives = 49/77 (63%) Frame = +1 Query: 7 GPKFSRKVVKSVTYRVKSVPLSSKPVDKSRNESALSNPSSEPFQTSTPHEVDPASQSSSI 186 G KF R++VK+VTYRVKSVP S+K K E S P+++ P SQ S+ Sbjct: 1290 GTKFGRRIVKAVTYRVKSVP-STKTATKL-----------ETGTISAPNDMSPISQKKSV 1337 Query: 187 VSLGKSPSYKEVALAPP 237 VSLGKS SYKEVALAPP Sbjct: 1338 VSLGKSLSYKEVALAPP 1354