BLASTX nr result

ID: Coptis25_contig00020128 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020128
         (819 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304640.1| AP2/ERF domain-containing transcription fact...   169   9e-40
ref|XP_002512669.1| AP2 domain transcription factor RAP2.3, puta...   153   5e-35
ref|XP_002297877.1| AP2/ERF domain-containing transcription fact...   151   2e-34
gb|ACO55953.1| RAP2-like protein [Juglans nigra]                      148   2e-33
gb|ADJ67443.1| ethylene response factor 14 [Actinidia deliciosa]      146   6e-33

>ref|XP_002304640.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222842072|gb|EEE79619.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 234

 Score =  169 bits (427), Expect = 9e-40
 Identities = 86/139 (61%), Positives = 95/139 (68%), Gaps = 9/139 (6%)
 Frame = -2

Query: 773 RRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXALRFKGTKAKLNFP 594
           RRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDT           AL+FKGTKAKLNFP
Sbjct: 52  RRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEDAAVAYDKAALKFKGTKAKLNFP 111

Query: 593 ERVQGRSELSYYLGR-QDTNTVVERVPDSVIPQPP--------FSHDAYPGLLQYAQLLS 441
           ERVQGR+E  YY+G    TN + E+ P  V P PP        F+ D YP LLQYAQ+LS
Sbjct: 112 ERVQGRTEFGYYMGSGTSTNVLTEQSPRPVAPPPPPPPPPPSSFAPDTYPDLLQYAQILS 171

Query: 440 SRDEDVQYVTPNFYNNQQF 384
           S D +  Y T N +N Q F
Sbjct: 172 SNDANFPYYTSNLFNQQPF 190


>ref|XP_002512669.1| AP2 domain transcription factor RAP2.3, putative [Ricinus communis]
           gi|223548630|gb|EEF50121.1| AP2 domain transcription
           factor RAP2.3, putative [Ricinus communis]
          Length = 249

 Score =  153 bits (386), Expect = 5e-35
 Identities = 86/186 (46%), Positives = 103/186 (55%), Gaps = 16/186 (8%)
 Frame = -2

Query: 773 RRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXALRFKGTKAKLNFP 594
           RRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDT           AL+FKGTKAKLNFP
Sbjct: 54  RRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEDAALAYDKAALKFKGTKAKLNFP 113

Query: 593 ERVQGRSELSYYLGRQDTNT----------VVERVPDSVIPQPP---FSHDAYPGLLQYA 453
           ERVQG+ E SY++     ++          ++     S +P PP   F  + YP LLQYA
Sbjct: 114 ERVQGKPEFSYFMTTSGDSSSSISPGQNPMLMAPPASSYLPPPPPPSFPQETYPDLLQYA 173

Query: 452 QLLSSRDEDVQYVTPNFYNNQQFVXXXXXXXXXXXXXXXXXXSDHQQEFRTFG---GSAS 282
           Q+LSS D    Y T N +N Q +                      QQ+   F     S+S
Sbjct: 174 QILSSTDASFPYYTSNLFNQQPYTPHYSSNEPSSTFLSQQQQQHQQQDLMRFSPWFDSSS 233

Query: 281 GSEHFE 264
           GS++ E
Sbjct: 234 GSDYQE 239


>ref|XP_002297877.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222845135|gb|EEE82682.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 231

 Score =  151 bits (381), Expect = 2e-34
 Identities = 79/135 (58%), Positives = 90/135 (66%), Gaps = 5/135 (3%)
 Frame = -2

Query: 773 RRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXALRFKGTKAKLNFP 594
           RRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDT           AL+FKG+KAKLNFP
Sbjct: 52  RRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEDAAVAYDKAALKFKGSKAKLNFP 111

Query: 593 ERVQGRSELSYYLGR-QDTNTVVERVPDSVIPQPP----FSHDAYPGLLQYAQLLSSRDE 429
           ERV    E  Y++     +N + E+ P  V P PP    F+ D YP LLQYAQ+LSS D 
Sbjct: 112 ERVH---EFGYFMSSGASSNVMTEQNPRPVAPPPPPPSSFAPDTYPDLLQYAQILSSNDA 168

Query: 428 DVQYVTPNFYNNQQF 384
           +  Y T N +N Q F
Sbjct: 169 NFPYYTSNLFNQQPF 183


>gb|ACO55953.1| RAP2-like protein [Juglans nigra]
          Length = 226

 Score =  148 bits (373), Expect = 2e-33
 Identities = 79/137 (57%), Positives = 89/137 (64%), Gaps = 7/137 (5%)
 Frame = -2

Query: 773 RRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXALRFKGTKAKLNFP 594
           RRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+T           ALRFKGTKAKLNFP
Sbjct: 55  RRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEDAALAYDRAALRFKGTKAKLNFP 114

Query: 593 ERVQGRSELSYYLGRQDTNTVVERV----PDSVIPQPPFS---HDAYPGLLQYAQLLSSR 435
           ERVQG SE  Y  G  +T+     V    P  V+  PP +      +PGL QYAQLLSS 
Sbjct: 115 ERVQGTSEFGYPSGFGNTSVSQSAVPVQNPRPVVNPPPSTLPQESTFPGLYQYAQLLSSS 174

Query: 434 DEDVQYVTPNFYNNQQF 384
           D +  Y T + +N + F
Sbjct: 175 DVEFPYYTSSLFNQESF 191


>gb|ADJ67443.1| ethylene response factor 14 [Actinidia deliciosa]
          Length = 235

 Score =  146 bits (368), Expect = 6e-33
 Identities = 77/144 (53%), Positives = 89/144 (61%), Gaps = 9/144 (6%)
 Frame = -2

Query: 785 GTQTRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXALRFKGTKAK 606
           G   +RHYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+T           ALRFKGTKAK
Sbjct: 29  GNVGKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEDAALAYDEAALRFKGTKAK 88

Query: 605 LNFPERVQGRSELSYYLGRQDTNTVVERVPDSVIPQPP---------FSHDAYPGLLQYA 453
           LNFPE+VQ ++E +Y      T    +R+ +  +P PP          S + YP L QYA
Sbjct: 89  LNFPEKVQAKTEYAYLTA--STTHGEDRISNPYVPPPPPAPPLPDSMSSQETYPDLFQYA 146

Query: 452 QLLSSRDEDVQYVTPNFYNNQQFV 381
           QLLSS D D  Y +   YN   FV
Sbjct: 147 QLLSSSDADFPYFSSALYNQHPFV 170


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