BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020126
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair p...    94   3e-22
ref|XP_002300148.1| predicted protein [Populus trichocarpa] gi|2...    94   3e-22
ref|XP_003552170.1| PREDICTED: DNA repair protein RAD50-like [Gl...    93   2e-21
ref|XP_004133980.1| PREDICTED: DNA repair protein RAD50-like [Cu...    94   2e-21
ref|XP_004166115.1| PREDICTED: DNA repair protein RAD50-like, pa...    94   2e-21

>ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD50-like [Vitis
            vinifera]
          Length = 1316

 Score = 94.4 bits (233), Expect(2) = 3e-22
 Identities = 46/47 (97%), Positives = 47/47 (100%)
 Frame = -1

Query: 425  EPTTNLDGPNAESLAAALLRIMDDRKGQENFQLIVITHDERFAQLIG 285
            EPTTNLDGPNAESLAAALLRIM+DRKGQENFQLIVITHDERFAQLIG
Sbjct: 1242 EPTTNLDGPNAESLAAALLRIMEDRKGQENFQLIVITHDERFAQLIG 1288



 Score = 35.4 bits (80), Expect(2) = 3e-22
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = -3

Query: 189  VAKNDRQHSIIEAQEIFD 136
            VAK+D QHSIIEAQEIFD
Sbjct: 1299 VAKDDHQHSIIEAQEIFD 1316


>ref|XP_002300148.1| predicted protein [Populus trichocarpa] gi|222847406|gb|EEE84953.1|
            predicted protein [Populus trichocarpa]
          Length = 1316

 Score = 94.4 bits (233), Expect(2) = 3e-22
 Identities = 46/47 (97%), Positives = 47/47 (100%)
 Frame = -1

Query: 425  EPTTNLDGPNAESLAAALLRIMDDRKGQENFQLIVITHDERFAQLIG 285
            EPTTNLDGPNAESLAAALLRIM+DRKGQENFQLIVITHDERFAQLIG
Sbjct: 1242 EPTTNLDGPNAESLAAALLRIMEDRKGQENFQLIVITHDERFAQLIG 1288



 Score = 35.4 bits (80), Expect(2) = 3e-22
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = -3

Query: 189  VAKNDRQHSIIEAQEIFD 136
            VAK+D QHSIIEAQEIFD
Sbjct: 1299 VAKDDHQHSIIEAQEIFD 1316


>ref|XP_003552170.1| PREDICTED: DNA repair protein RAD50-like [Glycine max]
          Length = 1316

 Score = 93.2 bits (230), Expect(2) = 2e-21
 Identities = 45/47 (95%), Positives = 47/47 (100%)
 Frame = -1

Query: 425  EPTTNLDGPNAESLAAALLRIMDDRKGQENFQLIVITHDERFAQLIG 285
            EPTTNLDGPNAESLAAAL+RIM+DRKGQENFQLIVITHDERFAQLIG
Sbjct: 1242 EPTTNLDGPNAESLAAALVRIMEDRKGQENFQLIVITHDERFAQLIG 1288



 Score = 34.3 bits (77), Expect(2) = 2e-21
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = -3

Query: 189  VAKNDRQHSIIEAQEIFD 136
            VAK+D QHSIIE+QEIFD
Sbjct: 1299 VAKDDHQHSIIESQEIFD 1316


>ref|XP_004133980.1| PREDICTED: DNA repair protein RAD50-like [Cucumis sativus]
          Length = 1316

 Score = 94.4 bits (233), Expect(2) = 2e-21
 Identities = 46/47 (97%), Positives = 47/47 (100%)
 Frame = -1

Query: 425  EPTTNLDGPNAESLAAALLRIMDDRKGQENFQLIVITHDERFAQLIG 285
            EPTTNLDGPNAESLAAALLRIM+DRKGQENFQLIVITHDERFAQLIG
Sbjct: 1242 EPTTNLDGPNAESLAAALLRIMEDRKGQENFQLIVITHDERFAQLIG 1288



 Score = 32.7 bits (73), Expect(2) = 2e-21
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = -3

Query: 189  VAKNDRQHSIIEAQEIFD 136
            V K+D QHSIIE+QEIFD
Sbjct: 1299 VTKDDHQHSIIESQEIFD 1316


>ref|XP_004166115.1| PREDICTED: DNA repair protein RAD50-like, partial [Cucumis sativus]
          Length = 1088

 Score = 94.4 bits (233), Expect(2) = 2e-21
 Identities = 46/47 (97%), Positives = 47/47 (100%)
 Frame = -1

Query: 425  EPTTNLDGPNAESLAAALLRIMDDRKGQENFQLIVITHDERFAQLIG 285
            EPTTNLDGPNAESLAAALLRIM+DRKGQENFQLIVITHDERFAQLIG
Sbjct: 1014 EPTTNLDGPNAESLAAALLRIMEDRKGQENFQLIVITHDERFAQLIG 1060



 Score = 32.7 bits (73), Expect(2) = 2e-21
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = -3

Query: 189  VAKNDRQHSIIEAQEIFD 136
            V K+D QHSIIE+QEIFD
Sbjct: 1071 VTKDDHQHSIIESQEIFD 1088