BLASTX nr result
ID: Coptis25_contig00020110
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00020110
(1917 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002885132.1| EMB2083 [Arabidopsis lyrata subsp. lyrata] g... 743 0.0
ref|XP_002278786.1| PREDICTED: ATP-dependent zinc metalloproteas... 743 0.0
gb|AAB63647.1| cell division protein FtsH isolog [Arabidopsis th... 743 0.0
dbj|BAB01269.1| cell division protein FtsH-like [Arabidopsis tha... 743 0.0
ref|NP_566541.1| AAA-type ATPase family protein [Arabidopsis tha... 743 0.0
>ref|XP_002885132.1| EMB2083 [Arabidopsis lyrata subsp. lyrata]
gi|297330972|gb|EFH61391.1| EMB2083 [Arabidopsis lyrata
subsp. lyrata]
Length = 874
Score = 743 bits (1918), Expect = 0.0
Identities = 376/542 (69%), Positives = 448/542 (82%), Gaps = 1/542 (0%)
Frame = +2
Query: 293 LSPEELKSWSKSLPIVSDRIAYTEILSLKNEGKLKHIIKLPTVSLKQKPDSVLVVLEDSR 472
L+ E+LK+WSK LP+VS+RI YT+ILSLK +GKLKH+IK P +SL+QK + VLVVLEDSR
Sbjct: 95 LTIEQLKAWSKDLPVVSNRIPYTDILSLKAQGKLKHVIKPPNLSLRQKAEPVLVVLEDSR 154
Query: 473 VLRTVLPTLERDDKFWVMWDELRLDSVCVNAYTPPLMKPEMPAPYLGVFLKILMFMLSLV 652
VLRTVLP+LE + +FW WDEL +D CVNAYTPP+ +P +P+PYLG K+ +ML+ V
Sbjct: 155 VLRTVLPSLEGNKRFWEEWDELGIDGQCVNAYTPPVKRPPVPSPYLGFLWKVPAYMLTWV 214
Query: 653 KTKKQSKRALELGNARKELQKRKKIELARVREDREMMEKVLKAQIKKEERKKRKVMSKIK 832
K KK+SKRA EL R++ ++++K E+ R++E+R MMEK +KAQ K++ERKKRK + K K
Sbjct: 215 KPKKESKRAAELKKMREDFKRQRKEEIERMKEERAMMEKTMKAQKKQQERKKRKAVRKKK 274
Query: 833 SEESMRKAKQNYQDMAVVWANLARDQNVSTALGFLFFYIFYRTVVFNYRRQQKDYEDRXX 1012
EES+R+A++NY+DMA +WA +A+D NV+TALG +FFYIFYR VV NYR+Q+KDYEDR
Sbjct: 275 YEESLREARRNYRDMADMWARMAQDPNVATALGLVFFYIFYRVVVLNYRKQKKDYEDRLK 334
Query: 1013 XXXXXXXXXXXXXXXXXXXX-VDGTDMDEEEGKSEDNQYLKMAMQFMKSGARVRRAHSRR 1189
++ D + EEG E N YL+MAMQFMKSGARVRRA ++R
Sbjct: 335 IEKAEADERKKMRELEREMEGIEEEDEELEEGTGEKNPYLQMAMQFMKSGARVRRASNKR 394
Query: 1190 LPQYQERGLDVKFSDVAGLGKIRLELEEVVKFFTHGEMYRRRGVKXXXXXXXXXXXXXXK 1369
LP+Y ERG+DVKF+DVAGLGKIRLELEE+VKFFTHGEMYRRRGVK K
Sbjct: 395 LPEYLERGVDVKFTDVAGLGKIRLELEEIVKFFTHGEMYRRRGVKIPGGILLCGPPGVGK 454
Query: 1370 TLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRGLYQEARENAPSVVFIDELDAVGR 1549
TLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVR LYQEARENAPSVVFIDELDAVGR
Sbjct: 455 TLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRALYQEARENAPSVVFIDELDAVGR 514
Query: 1550 ERGLIKGSGGQERDATLNQLLVCLDGFEGRGEVITIAATNRPDILDPALVRPGRFDRKIY 1729
ERGLIKGSGGQERDATLNQLLV LDGFEGRGEVITIA+TNRPDILDPALVRPGRFDRKI+
Sbjct: 515 ERGLIKGSGGQERDATLNQLLVSLDGFEGRGEVITIASTNRPDILDPALVRPGRFDRKIF 574
Query: 1730 IPKPGVVGRVEILKVHARKKPMAEDVDYMAVASMTAGMVGADLANIIEVAAINMMREGRS 1909
IPKPG++GR+EIL+VHARKKPMAED+DYMAVASMT GMVGA+LANI+E+AAINMMR+GR+
Sbjct: 575 IPKPGLIGRMEILQVHARKKPMAEDLDYMAVASMTDGMVGAELANIVEIAAINMMRDGRT 634
Query: 1910 EI 1915
E+
Sbjct: 635 EL 636
>ref|XP_002278786.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH-like [Vitis
vinifera]
Length = 888
Score = 743 bits (1918), Expect = 0.0
Identities = 377/545 (69%), Positives = 443/545 (81%), Gaps = 4/545 (0%)
Frame = +2
Query: 293 LSPEELKSWSKSLPIVSDRIAYTEILSLKNEGKLKHIIKLPT---VSLKQKPDSVLVVLE 463
L+P+ELKSW++ LP+V+DR+ YT+IL LK EGKLKH+IK P V L+Q+ ++VLVVLE
Sbjct: 106 LTPQELKSWTEGLPVVTDRVPYTDILDLKREGKLKHVIKPPGGPGVGLRQRAEAVLVVLE 165
Query: 464 DSRVLRTVLPTLERDDKFWVMWDELRLDSVCVNAYTPPLMKPEMPAPYLGVFLKILMFML 643
DSRVLRTV+P++E+D +FW MWDEL++DSVCVNAY+PP+ PE+P PYLG +I +M
Sbjct: 166 DSRVLRTVVPSVEKDRRFWEMWDELKIDSVCVNAYSPPVKGPELPVPYLGFLSRIPAYMF 225
Query: 644 SLVKTKKQSKRALELGNARKELQKRKKIELARVREDREMMEKVLKAQIKKEERKKRKVMS 823
S VK K SKRA+E+ R+EL++ +K EL +RE+REMMEK ++ Q + EE++ R+ +
Sbjct: 226 SFVKPKPVSKRAMEIKREREELKRNRKKELVGMREEREMMEKAIRVQKRMEEKRIRRELK 285
Query: 824 KIKSEESMRKAKQNYQDMAVVWANLARDQNVSTALGFLFFYIFYRTVVFNYRRQQKDYED 1003
K K EES R A++ Y+ MA WANLA D NV+TALGF+FFYIFYRTVV +YR+Q+KDYED
Sbjct: 286 KKKYEESTRDARRKYERMANFWANLAADSNVATALGFVFFYIFYRTVVLSYRKQKKDYED 345
Query: 1004 RXXXXXXXXXXXXXXXXXXXXXX-VDGTDMDEEEGKSEDNQYLKMAMQFMKSGARVRRAH 1180
R ++G + + E E N Y+KMAMQFMKSGARVRRAH
Sbjct: 346 RLKIEKAEAEEKKKMRELERQLEGIEGGEDESEIVGGEQNPYMKMAMQFMKSGARVRRAH 405
Query: 1181 SRRLPQYQERGLDVKFSDVAGLGKIRLELEEVVKFFTHGEMYRRRGVKXXXXXXXXXXXX 1360
++RLPQY ERG+DVKF+DVAGLGKIRLELEE+VKFFTHGEMYRRRGVK
Sbjct: 406 NKRLPQYLERGVDVKFTDVAGLGKIRLELEEIVKFFTHGEMYRRRGVKIPGGILLCGPPG 465
Query: 1361 XXKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRGLYQEARENAPSVVFIDELDA 1540
KTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVR LYQEA+ENAPSVVFIDELDA
Sbjct: 466 VGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRALYQEAKENAPSVVFIDELDA 525
Query: 1541 VGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGEVITIAATNRPDILDPALVRPGRFDR 1720
VGRERGLIKGSGGQERDATLNQLLVCLDGFEGRG VITIA+TNRPDILDPALVRPGRFDR
Sbjct: 526 VGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDR 585
Query: 1721 KIYIPKPGVVGRVEILKVHARKKPMAEDVDYMAVASMTAGMVGADLANIIEVAAINMMRE 1900
KIYIPKPG++GR+EILKVHARKKPMAEDVDYMAV SMT GMVGA+LANIIE+AAINMMR+
Sbjct: 586 KIYIPKPGIIGRIEILKVHARKKPMAEDVDYMAVGSMTDGMVGAELANIIEIAAINMMRD 645
Query: 1901 GRSEI 1915
GRSEI
Sbjct: 646 GRSEI 650
>gb|AAB63647.1| cell division protein FtsH isolog [Arabidopsis thaliana]
Length = 983
Score = 743 bits (1917), Expect = 0.0
Identities = 377/542 (69%), Positives = 447/542 (82%), Gaps = 1/542 (0%)
Frame = +2
Query: 293 LSPEELKSWSKSLPIVSDRIAYTEILSLKNEGKLKHIIKLPTVSLKQKPDSVLVVLEDSR 472
L+ E+LK+WSK LP+VS+RI YT+ILSLK EGKLKH+IK P +SL+QK + VLVVLEDSR
Sbjct: 259 LTLEQLKAWSKDLPVVSNRIPYTDILSLKAEGKLKHVIKPPNLSLRQKAEPVLVVLEDSR 318
Query: 473 VLRTVLPTLERDDKFWVMWDELRLDSVCVNAYTPPLMKPEMPAPYLGVFLKILMFMLSLV 652
VLRTVLP+LE + +FW WDEL +D CVNAYTPP+ +P +P+PYLG K+ +ML+ V
Sbjct: 319 VLRTVLPSLEGNKRFWEQWDELGIDVQCVNAYTPPVKRPPVPSPYLGFLWKVPAYMLTWV 378
Query: 653 KTKKQSKRALELGNARKELQKRKKIELARVREDREMMEKVLKAQIKKEERKKRKVMSKIK 832
K KK+SKRA EL R++ ++++K E+ ++E+R MMEK +KAQ K++ERKKRK + K K
Sbjct: 379 KPKKESKRAAELKRMREDFKRQRKEEIETMKEERVMMEKTMKAQKKQQERKKRKAVRKKK 438
Query: 833 SEESMRKAKQNYQDMAVVWANLARDQNVSTALGFLFFYIFYRTVVFNYRRQQKDYEDRXX 1012
EES+R+A++NY+DMA +WA LA+D NV+TALG +FFYIFYR VV NYR+Q+KDYEDR
Sbjct: 439 YEESLREARKNYRDMADMWARLAQDPNVATALGLVFFYIFYRVVVLNYRKQKKDYEDRLK 498
Query: 1013 XXXXXXXXXXXXXXXXXXXX-VDGTDMDEEEGKSEDNQYLKMAMQFMKSGARVRRAHSRR 1189
++ D + EEG E N YL+MAMQFMKSGARVRRA ++R
Sbjct: 499 IEKAEADERKKMRELEREMEGIEEEDEEVEEGTGEKNPYLQMAMQFMKSGARVRRASNKR 558
Query: 1190 LPQYQERGLDVKFSDVAGLGKIRLELEEVVKFFTHGEMYRRRGVKXXXXXXXXXXXXXXK 1369
LP+Y ERG+DVKF+DVAGLGKIRLELEE+VKFFTHGEMYRRRGVK K
Sbjct: 559 LPEYLERGVDVKFTDVAGLGKIRLELEEIVKFFTHGEMYRRRGVKIPGGILLCGPPGVGK 618
Query: 1370 TLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRGLYQEARENAPSVVFIDELDAVGR 1549
TLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVR LYQEARENAPSVVFIDELDAVGR
Sbjct: 619 TLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRALYQEARENAPSVVFIDELDAVGR 678
Query: 1550 ERGLIKGSGGQERDATLNQLLVCLDGFEGRGEVITIAATNRPDILDPALVRPGRFDRKIY 1729
ERGLIKGSGGQERDATLNQLLV LDGFEGRGEVITIA+TNRPDILDPALVRPGRFDRKI+
Sbjct: 679 ERGLIKGSGGQERDATLNQLLVSLDGFEGRGEVITIASTNRPDILDPALVRPGRFDRKIF 738
Query: 1730 IPKPGVVGRVEILKVHARKKPMAEDVDYMAVASMTAGMVGADLANIIEVAAINMMREGRS 1909
IPKPG++GR+EIL+VHARKKPMAED+DYMAVASMT GMVGA+LANI+E+AAINMMR+GR+
Sbjct: 739 IPKPGLIGRMEILQVHARKKPMAEDLDYMAVASMTDGMVGAELANIVEIAAINMMRDGRT 798
Query: 1910 EI 1915
E+
Sbjct: 799 EL 800
>dbj|BAB01269.1| cell division protein FtsH-like [Arabidopsis thaliana]
Length = 976
Score = 743 bits (1917), Expect = 0.0
Identities = 377/542 (69%), Positives = 447/542 (82%), Gaps = 1/542 (0%)
Frame = +2
Query: 293 LSPEELKSWSKSLPIVSDRIAYTEILSLKNEGKLKHIIKLPTVSLKQKPDSVLVVLEDSR 472
L+ E+LK+WSK LP+VS+RI YT+ILSLK EGKLKH+IK P +SL+QK + VLVVLEDSR
Sbjct: 197 LTLEQLKAWSKDLPVVSNRIPYTDILSLKAEGKLKHVIKPPNLSLRQKAEPVLVVLEDSR 256
Query: 473 VLRTVLPTLERDDKFWVMWDELRLDSVCVNAYTPPLMKPEMPAPYLGVFLKILMFMLSLV 652
VLRTVLP+LE + +FW WDEL +D CVNAYTPP+ +P +P+PYLG K+ +ML+ V
Sbjct: 257 VLRTVLPSLEGNKRFWEQWDELGIDVQCVNAYTPPVKRPPVPSPYLGFLWKVPAYMLTWV 316
Query: 653 KTKKQSKRALELGNARKELQKRKKIELARVREDREMMEKVLKAQIKKEERKKRKVMSKIK 832
K KK+SKRA EL R++ ++++K E+ ++E+R MMEK +KAQ K++ERKKRK + K K
Sbjct: 317 KPKKESKRAAELKRMREDFKRQRKEEIETMKEERVMMEKTMKAQKKQQERKKRKAVRKKK 376
Query: 833 SEESMRKAKQNYQDMAVVWANLARDQNVSTALGFLFFYIFYRTVVFNYRRQQKDYEDRXX 1012
EES+R+A++NY+DMA +WA LA+D NV+TALG +FFYIFYR VV NYR+Q+KDYEDR
Sbjct: 377 YEESLREARKNYRDMADMWARLAQDPNVATALGLVFFYIFYRVVVLNYRKQKKDYEDRLK 436
Query: 1013 XXXXXXXXXXXXXXXXXXXX-VDGTDMDEEEGKSEDNQYLKMAMQFMKSGARVRRAHSRR 1189
++ D + EEG E N YL+MAMQFMKSGARVRRA ++R
Sbjct: 437 IEKAEADERKKMRELEREMEGIEEEDEEVEEGTGEKNPYLQMAMQFMKSGARVRRASNKR 496
Query: 1190 LPQYQERGLDVKFSDVAGLGKIRLELEEVVKFFTHGEMYRRRGVKXXXXXXXXXXXXXXK 1369
LP+Y ERG+DVKF+DVAGLGKIRLELEE+VKFFTHGEMYRRRGVK K
Sbjct: 497 LPEYLERGVDVKFTDVAGLGKIRLELEEIVKFFTHGEMYRRRGVKIPGGILLCGPPGVGK 556
Query: 1370 TLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRGLYQEARENAPSVVFIDELDAVGR 1549
TLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVR LYQEARENAPSVVFIDELDAVGR
Sbjct: 557 TLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRALYQEARENAPSVVFIDELDAVGR 616
Query: 1550 ERGLIKGSGGQERDATLNQLLVCLDGFEGRGEVITIAATNRPDILDPALVRPGRFDRKIY 1729
ERGLIKGSGGQERDATLNQLLV LDGFEGRGEVITIA+TNRPDILDPALVRPGRFDRKI+
Sbjct: 617 ERGLIKGSGGQERDATLNQLLVSLDGFEGRGEVITIASTNRPDILDPALVRPGRFDRKIF 676
Query: 1730 IPKPGVVGRVEILKVHARKKPMAEDVDYMAVASMTAGMVGADLANIIEVAAINMMREGRS 1909
IPKPG++GR+EIL+VHARKKPMAED+DYMAVASMT GMVGA+LANI+E+AAINMMR+GR+
Sbjct: 677 IPKPGLIGRMEILQVHARKKPMAEDLDYMAVASMTDGMVGAELANIVEIAAINMMRDGRT 736
Query: 1910 EI 1915
E+
Sbjct: 737 EL 738
>ref|NP_566541.1| AAA-type ATPase family protein [Arabidopsis thaliana]
gi|332642273|gb|AEE75794.1| AAA-type ATPase family
protein [Arabidopsis thaliana]
Length = 876
Score = 743 bits (1917), Expect = 0.0
Identities = 377/542 (69%), Positives = 447/542 (82%), Gaps = 1/542 (0%)
Frame = +2
Query: 293 LSPEELKSWSKSLPIVSDRIAYTEILSLKNEGKLKHIIKLPTVSLKQKPDSVLVVLEDSR 472
L+ E+LK+WSK LP+VS+RI YT+ILSLK EGKLKH+IK P +SL+QK + VLVVLEDSR
Sbjct: 97 LTLEQLKAWSKDLPVVSNRIPYTDILSLKAEGKLKHVIKPPNLSLRQKAEPVLVVLEDSR 156
Query: 473 VLRTVLPTLERDDKFWVMWDELRLDSVCVNAYTPPLMKPEMPAPYLGVFLKILMFMLSLV 652
VLRTVLP+LE + +FW WDEL +D CVNAYTPP+ +P +P+PYLG K+ +ML+ V
Sbjct: 157 VLRTVLPSLEGNKRFWEQWDELGIDVQCVNAYTPPVKRPPVPSPYLGFLWKVPAYMLTWV 216
Query: 653 KTKKQSKRALELGNARKELQKRKKIELARVREDREMMEKVLKAQIKKEERKKRKVMSKIK 832
K KK+SKRA EL R++ ++++K E+ ++E+R MMEK +KAQ K++ERKKRK + K K
Sbjct: 217 KPKKESKRAAELKRMREDFKRQRKEEIETMKEERVMMEKTMKAQKKQQERKKRKAVRKKK 276
Query: 833 SEESMRKAKQNYQDMAVVWANLARDQNVSTALGFLFFYIFYRTVVFNYRRQQKDYEDRXX 1012
EES+R+A++NY+DMA +WA LA+D NV+TALG +FFYIFYR VV NYR+Q+KDYEDR
Sbjct: 277 YEESLREARKNYRDMADMWARLAQDPNVATALGLVFFYIFYRVVVLNYRKQKKDYEDRLK 336
Query: 1013 XXXXXXXXXXXXXXXXXXXX-VDGTDMDEEEGKSEDNQYLKMAMQFMKSGARVRRAHSRR 1189
++ D + EEG E N YL+MAMQFMKSGARVRRA ++R
Sbjct: 337 IEKAEADERKKMRELEREMEGIEEEDEEVEEGTGEKNPYLQMAMQFMKSGARVRRASNKR 396
Query: 1190 LPQYQERGLDVKFSDVAGLGKIRLELEEVVKFFTHGEMYRRRGVKXXXXXXXXXXXXXXK 1369
LP+Y ERG+DVKF+DVAGLGKIRLELEE+VKFFTHGEMYRRRGVK K
Sbjct: 397 LPEYLERGVDVKFTDVAGLGKIRLELEEIVKFFTHGEMYRRRGVKIPGGILLCGPPGVGK 456
Query: 1370 TLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRGLYQEARENAPSVVFIDELDAVGR 1549
TLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVR LYQEARENAPSVVFIDELDAVGR
Sbjct: 457 TLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRALYQEARENAPSVVFIDELDAVGR 516
Query: 1550 ERGLIKGSGGQERDATLNQLLVCLDGFEGRGEVITIAATNRPDILDPALVRPGRFDRKIY 1729
ERGLIKGSGGQERDATLNQLLV LDGFEGRGEVITIA+TNRPDILDPALVRPGRFDRKI+
Sbjct: 517 ERGLIKGSGGQERDATLNQLLVSLDGFEGRGEVITIASTNRPDILDPALVRPGRFDRKIF 576
Query: 1730 IPKPGVVGRVEILKVHARKKPMAEDVDYMAVASMTAGMVGADLANIIEVAAINMMREGRS 1909
IPKPG++GR+EIL+VHARKKPMAED+DYMAVASMT GMVGA+LANI+E+AAINMMR+GR+
Sbjct: 577 IPKPGLIGRMEILQVHARKKPMAEDLDYMAVASMTDGMVGAELANIVEIAAINMMRDGRT 636
Query: 1910 EI 1915
E+
Sbjct: 637 EL 638