BLASTX nr result

ID: Coptis25_contig00020109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020109
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635631.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   130   1e-28
ref|XP_002264701.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   129   2e-28
emb|CBI30196.3| unnamed protein product [Vitis vinifera]              129   2e-28
ref|XP_004171505.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   128   5e-28
ref|XP_004150128.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   128   5e-28

>ref|XP_003635631.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like, partial
           [Vitis vinifera]
          Length = 242

 Score =  130 bits (326), Expect = 1e-28
 Identities = 65/104 (62%), Positives = 80/104 (76%)
 Frame = +1

Query: 1   FNETVKSSAAKHVSDPNQMFVKKEELSLDVVKQYKVYCPDEKTKLELIKDRIFELGDKLG 180
           FN+TVK+   + V D NQMFVKKEELSL  VKQYKV CPDE +K+ +IKD+IFELG KLG
Sbjct: 30  FNDTVKNFVTRIVKDYNQMFVKKEELSLQSVKQYKVKCPDELSKILVIKDKIFELGQKLG 89

Query: 181 QTIIFVNSKNSAKILHEEFGDYGYGCTTLHGNLDKEYGDKVVKE 312
           QTIIFV +KNSA +LH+   D+GY  TT+ G L +E  DK++KE
Sbjct: 90  QTIIFVRTKNSAGMLHKALVDFGYEVTTIQGALRQEDRDKIIKE 133


>ref|XP_002264701.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Vitis
           vinifera] gi|297740016|emb|CBI30198.3| unnamed protein
           product [Vitis vinifera]
          Length = 473

 Score =  129 bits (324), Expect = 2e-28
 Identities = 64/104 (61%), Positives = 80/104 (76%)
 Frame = +1

Query: 1   FNETVKSSAAKHVSDPNQMFVKKEELSLDVVKQYKVYCPDEKTKLELIKDRIFELGDKLG 180
           FN+TVK+   + V D NQMFVKKEELSL  VKQYKV CPDE +K+ +IKD+IFE+G KLG
Sbjct: 261 FNDTVKNFVTRIVKDYNQMFVKKEELSLQSVKQYKVKCPDELSKILVIKDKIFEIGQKLG 320

Query: 181 QTIIFVNSKNSAKILHEEFGDYGYGCTTLHGNLDKEYGDKVVKE 312
           QTIIFV +KNSA +LH+   D+GY  TT+ G L +E  DK++KE
Sbjct: 321 QTIIFVRTKNSAGMLHKALVDFGYEVTTIQGALRQEDRDKIIKE 364


>emb|CBI30196.3| unnamed protein product [Vitis vinifera]
          Length = 244

 Score =  129 bits (324), Expect = 2e-28
 Identities = 64/104 (61%), Positives = 80/104 (76%)
 Frame = +1

Query: 1   FNETVKSSAAKHVSDPNQMFVKKEELSLDVVKQYKVYCPDEKTKLELIKDRIFELGDKLG 180
           FN+TVK+   + V D NQMFVKKEELSL  VKQYKV CPDE +K+ +IKD+IFE+G KLG
Sbjct: 32  FNDTVKNFVTRIVKDYNQMFVKKEELSLQSVKQYKVKCPDELSKILVIKDKIFEIGQKLG 91

Query: 181 QTIIFVNSKNSAKILHEEFGDYGYGCTTLHGNLDKEYGDKVVKE 312
           QTIIFV +KNSA +LH+   D+GY  TT+ G L +E  DK++KE
Sbjct: 92  QTIIFVRTKNSAGMLHKALVDFGYEVTTIQGALRQEDRDKIIKE 135


>ref|XP_004171505.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Cucumis
           sativus]
          Length = 508

 Score =  128 bits (321), Expect = 5e-28
 Identities = 63/104 (60%), Positives = 79/104 (75%)
 Frame = +1

Query: 1   FNETVKSSAAKHVSDPNQMFVKKEELSLDVVKQYKVYCPDEKTKLELIKDRIFELGDKLG 180
           F+E VK+  ++ V D NQ+FVKKEELSL+ VKQYK+ CPDE TK+ +IKDRIFEL DKLG
Sbjct: 287 FDENVKNFVSRVVKDYNQLFVKKEELSLESVKQYKLICPDELTKIRVIKDRIFELADKLG 346

Query: 181 QTIIFVNSKNSAKILHEEFGDYGYGCTTLHGNLDKEYGDKVVKE 312
           QTIIFV ++NSA +LH+   D GY  TT+ G L  E  DK++KE
Sbjct: 347 QTIIFVRTRNSAGMLHKALVDLGYEVTTIQGALTTEIRDKIIKE 390


>ref|XP_004150128.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Cucumis
           sativus]
          Length = 508

 Score =  128 bits (321), Expect = 5e-28
 Identities = 63/104 (60%), Positives = 79/104 (75%)
 Frame = +1

Query: 1   FNETVKSSAAKHVSDPNQMFVKKEELSLDVVKQYKVYCPDEKTKLELIKDRIFELGDKLG 180
           F+E VK+  ++ V D NQ+FVKKEELSL+ VKQYK+ CPDE TK+ +IKDRIFEL DKLG
Sbjct: 287 FDENVKNFVSRVVKDYNQLFVKKEELSLESVKQYKLICPDELTKIRVIKDRIFELADKLG 346

Query: 181 QTIIFVNSKNSAKILHEEFGDYGYGCTTLHGNLDKEYGDKVVKE 312
           QTIIFV ++NSA +LH+   D GY  TT+ G L  E  DK++KE
Sbjct: 347 QTIIFVRTRNSAGMLHKALVDLGYEVTTIQGALTTEIRDKIIKE 390


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