BLASTX nr result

ID: Coptis25_contig00020098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020098
         (682 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276491.1| PREDICTED: vacuolar protein sorting-associat...   226   3e-57
ref|XP_002519583.1| Vacuolar protein sorting protein, putative [...   225   6e-57
gb|ADW66135.1| vacuolar protein sorting-associated protein 52 [S...   222   6e-56
ref|XP_002887359.1| hypothetical protein ARALYDRAFT_476259 [Arab...   218   7e-55
gb|AAG51887.1|AC016162_8 ARE1-like protein; 68800-64545 [Arabido...   217   2e-54

>ref|XP_002276491.1| PREDICTED: vacuolar protein sorting-associated protein 52 homolog
           [Vitis vinifera] gi|297737982|emb|CBI27183.3| unnamed
           protein product [Vitis vinifera]
          Length = 707

 Score =  226 bits (576), Expect = 3e-57
 Identities = 123/164 (75%), Positives = 137/164 (83%), Gaps = 2/164 (1%)
 Frame = +1

Query: 4   KAVSKVFDFIIQKIYSLGKLKINNQIHLQSVISKYKYAILFLKEHGNEVYIKVRGAYIDT 183
           KAVSKVF+FI+QK+Y+L K K N QI  QSV+ KYKY + FLKEHG EVYI+VR AYIDT
Sbjct: 225 KAVSKVFEFIVQKLYALRKPKTNIQILQQSVLLKYKYVVSFLKEHGKEVYIEVRAAYIDT 284

Query: 184 MNKVLSARSRDYIQALEKSELVIATSSDLIGVEIRSTARFSREKE--KKRSAGFALGERI 357
           MNKVLSA  R YIQALEK +L IATSSDLIGV+ RST+ FSR +E  K RSA +ALGERI
Sbjct: 285 MNKVLSAHFRAYIQALEKLQLDIATSSDLIGVDTRSTSLFSRGREPLKNRSAVYALGERI 344

Query: 358 NILKEIDQPALIPHIAEASSLKYPCEVLFRSLHKLLMDAAISEH 489
           +ILKEIDQPALIPHIAEASS KYP EVLFRSLHKLLMD A SE+
Sbjct: 345 SILKEIDQPALIPHIAEASSTKYPYEVLFRSLHKLLMDTASSEY 388



 Score = 55.5 bits (132), Expect = 1e-05
 Identities = 30/80 (37%), Positives = 46/80 (57%)
 Frame = +2

Query: 422 SILVKFSSGACTNF*WMLLFRSTAKNCESLKFIILDEIVSE*LIVICFSFCRYLFCDDLF 601
           +++   +  + T + + +LFRS  K       +++D   SE           YLFCDD F
Sbjct: 354 ALIPHIAEASSTKYPYEVLFRSLHK-------LLMDTASSE-----------YLFCDDFF 395

Query: 602 GEKSMFIDIFAGPFSVIDEH 661
           GE+++F +IFAGPF+VIDEH
Sbjct: 396 GEENIFYEIFAGPFAVIDEH 415


>ref|XP_002519583.1| Vacuolar protein sorting protein, putative [Ricinus communis]
           gi|223541241|gb|EEF42794.1| Vacuolar protein sorting
           protein, putative [Ricinus communis]
          Length = 713

 Score =  225 bits (574), Expect = 6e-57
 Identities = 124/164 (75%), Positives = 135/164 (82%), Gaps = 2/164 (1%)
 Frame = +1

Query: 4   KAVSKVFDFIIQKIYSLGKLKINNQIHLQSVISKYKYAILFLKEHGNEVYIKVRGAYIDT 183
           KAVSKVF+FI+QK+Y+L K K N QI  QSV+ KYKY I FLKEHG E+YI+VR AYIDT
Sbjct: 231 KAVSKVFEFIVQKLYALRKPKTNIQILQQSVLLKYKYVISFLKEHGKEIYIEVRTAYIDT 290

Query: 184 MNKVLSARSRDYIQALEKSELVIATSSDLIGVEIRSTARFSREKE--KKRSAGFALGERI 357
           MNKVLSA  R YIQALEK +L IA SSDLIGVE RS+  FSR +E  K RSA FALGERI
Sbjct: 291 MNKVLSAHFRAYIQALEKLQLDIAISSDLIGVETRSSGLFSRVREPLKNRSAVFALGERI 350

Query: 358 NILKEIDQPALIPHIAEASSLKYPCEVLFRSLHKLLMDAAISEH 489
           NILKEIDQPALIPHIAEASS KYP EVLFRSLHKLLMD A SE+
Sbjct: 351 NILKEIDQPALIPHIAEASSQKYPYEVLFRSLHKLLMDTATSEY 394


>gb|ADW66135.1| vacuolar protein sorting-associated protein 52 [Solanum nigrum]
          Length = 315

 Score =  222 bits (565), Expect = 6e-56
 Identities = 121/162 (74%), Positives = 134/162 (82%), Gaps = 2/162 (1%)
 Frame = +1

Query: 4   KAVSKVFDFIIQKIYSLGKLKINNQIHLQSVISKYKYAILFLKEHGNEVYIKVRGAYIDT 183
           KAVSKVFDF++QK+Y+L K K N QI  QSV+ KYKY + FLKEHG EVY++VR AYIDT
Sbjct: 154 KAVSKVFDFMVQKLYALRKPKTNIQILQQSVLLKYKYILSFLKEHGKEVYLEVRAAYIDT 213

Query: 184 MNKVLSARSRDYIQALEKSELVIATSSDLIGVEIRSTARFSREKE--KKRSAGFALGERI 357
           MNKVLSA+ R YIQALEK +L IATS+DLIGVE RST  FSR +E  K RSA FALGERI
Sbjct: 214 MNKVLSAQFRAYIQALEKLQLDIATSNDLIGVETRSTGLFSRGREPLKNRSAVFALGERI 273

Query: 358 NILKEIDQPALIPHIAEASSLKYPCEVLFRSLHKLLMDAAIS 483
           NILKEID+P LIPHIAEASS KYP EVLFRSLHKLLMD A S
Sbjct: 274 NILKEIDEPPLIPHIAEASSKKYPYEVLFRSLHKLLMDTASS 315


>ref|XP_002887359.1| hypothetical protein ARALYDRAFT_476259 [Arabidopsis lyrata subsp.
           lyrata] gi|297333200|gb|EFH63618.1| hypothetical protein
           ARALYDRAFT_476259 [Arabidopsis lyrata subsp. lyrata]
          Length = 707

 Score =  218 bits (556), Expect = 7e-55
 Identities = 119/164 (72%), Positives = 133/164 (81%), Gaps = 2/164 (1%)
 Frame = +1

Query: 4   KAVSKVFDFIIQKIYSLGKLKINNQIHLQSVISKYKYAILFLKEHGNEVYIKVRGAYIDT 183
           KA+SKV+DFI+QK+ +L K K N QI  QSV+ KYKY I FLKEHG EV++ VR AYIDT
Sbjct: 225 KAISKVYDFIVQKLIALRKPKTNIQILQQSVLLKYKYIISFLKEHGKEVFMDVRAAYIDT 284

Query: 184 MNKVLSARSRDYIQALEKSELVIATSSDLIGVEIRSTARFSREKE--KKRSAGFALGERI 357
           MNKVLSA  R YIQALEK +L IAT+ DLIGVE R+T  FSR +E  K RSA FALGERI
Sbjct: 285 MNKVLSAHFRAYIQALEKLQLDIATAYDLIGVETRTTGLFSRAREPLKNRSAVFALGERI 344

Query: 358 NILKEIDQPALIPHIAEASSLKYPCEVLFRSLHKLLMDAAISEH 489
            I+KEIDQPALIPHIAEASSLKYP EVLFRSLHKLLMD A SE+
Sbjct: 345 KIIKEIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEY 388



 Score = 55.5 bits (132), Expect = 1e-05
 Identities = 30/80 (37%), Positives = 45/80 (56%)
 Frame = +2

Query: 422 SILVKFSSGACTNF*WMLLFRSTAKNCESLKFIILDEIVSE*LIVICFSFCRYLFCDDLF 601
           +++   +  +   + + +LFRS  K       +++D   SE           Y+FCDD F
Sbjct: 354 ALIPHIAEASSLKYPYEVLFRSLHK-------LLMDTATSE-----------YIFCDDFF 395

Query: 602 GEKSMFIDIFAGPFSVIDEH 661
           GE+S+F +IFAGPFSVIDEH
Sbjct: 396 GEESIFYEIFAGPFSVIDEH 415


>gb|AAG51887.1|AC016162_8 ARE1-like protein; 68800-64545 [Arabidopsis thaliana]
          Length = 701

 Score =  217 bits (553), Expect = 2e-54
 Identities = 118/164 (71%), Positives = 131/164 (79%), Gaps = 2/164 (1%)
 Frame = +1

Query: 4   KAVSKVFDFIIQKIYSLGKLKINNQIHLQSVISKYKYAILFLKEHGNEVYIKVRGAYIDT 183
           KA+SKV+DFI+QK+ +L K K N QI  QSV  KYKY I FLKEHG EV++ VR AYIDT
Sbjct: 219 KAISKVYDFIVQKLIALRKPKTNIQILQQSVFLKYKYIISFLKEHGKEVFMDVRAAYIDT 278

Query: 184 MNKVLSARSRDYIQALEKSELVIATSSDLIGVEIRSTARFSREKE--KKRSAGFALGERI 357
           MNKVLSA  + YIQA EK +L IATS+DLIGV+ RST  FSR KE  K R A FALGERI
Sbjct: 279 MNKVLSAHFQSYIQAFEKLQLDIATSNDLIGVDTRSTGLFSRSKEPLKNRCAVFALGERI 338

Query: 358 NILKEIDQPALIPHIAEASSLKYPCEVLFRSLHKLLMDAAISEH 489
            I+KEIDQPALIPHIAEASSLKYP EVLFRSLHKLLMD A SE+
Sbjct: 339 QIIKEIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEY 382


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