BLASTX nr result
ID: Coptis25_contig00020098
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00020098
(682 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276491.1| PREDICTED: vacuolar protein sorting-associat... 226 3e-57
ref|XP_002519583.1| Vacuolar protein sorting protein, putative [... 225 6e-57
gb|ADW66135.1| vacuolar protein sorting-associated protein 52 [S... 222 6e-56
ref|XP_002887359.1| hypothetical protein ARALYDRAFT_476259 [Arab... 218 7e-55
gb|AAG51887.1|AC016162_8 ARE1-like protein; 68800-64545 [Arabido... 217 2e-54
>ref|XP_002276491.1| PREDICTED: vacuolar protein sorting-associated protein 52 homolog
[Vitis vinifera] gi|297737982|emb|CBI27183.3| unnamed
protein product [Vitis vinifera]
Length = 707
Score = 226 bits (576), Expect = 3e-57
Identities = 123/164 (75%), Positives = 137/164 (83%), Gaps = 2/164 (1%)
Frame = +1
Query: 4 KAVSKVFDFIIQKIYSLGKLKINNQIHLQSVISKYKYAILFLKEHGNEVYIKVRGAYIDT 183
KAVSKVF+FI+QK+Y+L K K N QI QSV+ KYKY + FLKEHG EVYI+VR AYIDT
Sbjct: 225 KAVSKVFEFIVQKLYALRKPKTNIQILQQSVLLKYKYVVSFLKEHGKEVYIEVRAAYIDT 284
Query: 184 MNKVLSARSRDYIQALEKSELVIATSSDLIGVEIRSTARFSREKE--KKRSAGFALGERI 357
MNKVLSA R YIQALEK +L IATSSDLIGV+ RST+ FSR +E K RSA +ALGERI
Sbjct: 285 MNKVLSAHFRAYIQALEKLQLDIATSSDLIGVDTRSTSLFSRGREPLKNRSAVYALGERI 344
Query: 358 NILKEIDQPALIPHIAEASSLKYPCEVLFRSLHKLLMDAAISEH 489
+ILKEIDQPALIPHIAEASS KYP EVLFRSLHKLLMD A SE+
Sbjct: 345 SILKEIDQPALIPHIAEASSTKYPYEVLFRSLHKLLMDTASSEY 388
Score = 55.5 bits (132), Expect = 1e-05
Identities = 30/80 (37%), Positives = 46/80 (57%)
Frame = +2
Query: 422 SILVKFSSGACTNF*WMLLFRSTAKNCESLKFIILDEIVSE*LIVICFSFCRYLFCDDLF 601
+++ + + T + + +LFRS K +++D SE YLFCDD F
Sbjct: 354 ALIPHIAEASSTKYPYEVLFRSLHK-------LLMDTASSE-----------YLFCDDFF 395
Query: 602 GEKSMFIDIFAGPFSVIDEH 661
GE+++F +IFAGPF+VIDEH
Sbjct: 396 GEENIFYEIFAGPFAVIDEH 415
>ref|XP_002519583.1| Vacuolar protein sorting protein, putative [Ricinus communis]
gi|223541241|gb|EEF42794.1| Vacuolar protein sorting
protein, putative [Ricinus communis]
Length = 713
Score = 225 bits (574), Expect = 6e-57
Identities = 124/164 (75%), Positives = 135/164 (82%), Gaps = 2/164 (1%)
Frame = +1
Query: 4 KAVSKVFDFIIQKIYSLGKLKINNQIHLQSVISKYKYAILFLKEHGNEVYIKVRGAYIDT 183
KAVSKVF+FI+QK+Y+L K K N QI QSV+ KYKY I FLKEHG E+YI+VR AYIDT
Sbjct: 231 KAVSKVFEFIVQKLYALRKPKTNIQILQQSVLLKYKYVISFLKEHGKEIYIEVRTAYIDT 290
Query: 184 MNKVLSARSRDYIQALEKSELVIATSSDLIGVEIRSTARFSREKE--KKRSAGFALGERI 357
MNKVLSA R YIQALEK +L IA SSDLIGVE RS+ FSR +E K RSA FALGERI
Sbjct: 291 MNKVLSAHFRAYIQALEKLQLDIAISSDLIGVETRSSGLFSRVREPLKNRSAVFALGERI 350
Query: 358 NILKEIDQPALIPHIAEASSLKYPCEVLFRSLHKLLMDAAISEH 489
NILKEIDQPALIPHIAEASS KYP EVLFRSLHKLLMD A SE+
Sbjct: 351 NILKEIDQPALIPHIAEASSQKYPYEVLFRSLHKLLMDTATSEY 394
>gb|ADW66135.1| vacuolar protein sorting-associated protein 52 [Solanum nigrum]
Length = 315
Score = 222 bits (565), Expect = 6e-56
Identities = 121/162 (74%), Positives = 134/162 (82%), Gaps = 2/162 (1%)
Frame = +1
Query: 4 KAVSKVFDFIIQKIYSLGKLKINNQIHLQSVISKYKYAILFLKEHGNEVYIKVRGAYIDT 183
KAVSKVFDF++QK+Y+L K K N QI QSV+ KYKY + FLKEHG EVY++VR AYIDT
Sbjct: 154 KAVSKVFDFMVQKLYALRKPKTNIQILQQSVLLKYKYILSFLKEHGKEVYLEVRAAYIDT 213
Query: 184 MNKVLSARSRDYIQALEKSELVIATSSDLIGVEIRSTARFSREKE--KKRSAGFALGERI 357
MNKVLSA+ R YIQALEK +L IATS+DLIGVE RST FSR +E K RSA FALGERI
Sbjct: 214 MNKVLSAQFRAYIQALEKLQLDIATSNDLIGVETRSTGLFSRGREPLKNRSAVFALGERI 273
Query: 358 NILKEIDQPALIPHIAEASSLKYPCEVLFRSLHKLLMDAAIS 483
NILKEID+P LIPHIAEASS KYP EVLFRSLHKLLMD A S
Sbjct: 274 NILKEIDEPPLIPHIAEASSKKYPYEVLFRSLHKLLMDTASS 315
>ref|XP_002887359.1| hypothetical protein ARALYDRAFT_476259 [Arabidopsis lyrata subsp.
lyrata] gi|297333200|gb|EFH63618.1| hypothetical protein
ARALYDRAFT_476259 [Arabidopsis lyrata subsp. lyrata]
Length = 707
Score = 218 bits (556), Expect = 7e-55
Identities = 119/164 (72%), Positives = 133/164 (81%), Gaps = 2/164 (1%)
Frame = +1
Query: 4 KAVSKVFDFIIQKIYSLGKLKINNQIHLQSVISKYKYAILFLKEHGNEVYIKVRGAYIDT 183
KA+SKV+DFI+QK+ +L K K N QI QSV+ KYKY I FLKEHG EV++ VR AYIDT
Sbjct: 225 KAISKVYDFIVQKLIALRKPKTNIQILQQSVLLKYKYIISFLKEHGKEVFMDVRAAYIDT 284
Query: 184 MNKVLSARSRDYIQALEKSELVIATSSDLIGVEIRSTARFSREKE--KKRSAGFALGERI 357
MNKVLSA R YIQALEK +L IAT+ DLIGVE R+T FSR +E K RSA FALGERI
Sbjct: 285 MNKVLSAHFRAYIQALEKLQLDIATAYDLIGVETRTTGLFSRAREPLKNRSAVFALGERI 344
Query: 358 NILKEIDQPALIPHIAEASSLKYPCEVLFRSLHKLLMDAAISEH 489
I+KEIDQPALIPHIAEASSLKYP EVLFRSLHKLLMD A SE+
Sbjct: 345 KIIKEIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEY 388
Score = 55.5 bits (132), Expect = 1e-05
Identities = 30/80 (37%), Positives = 45/80 (56%)
Frame = +2
Query: 422 SILVKFSSGACTNF*WMLLFRSTAKNCESLKFIILDEIVSE*LIVICFSFCRYLFCDDLF 601
+++ + + + + +LFRS K +++D SE Y+FCDD F
Sbjct: 354 ALIPHIAEASSLKYPYEVLFRSLHK-------LLMDTATSE-----------YIFCDDFF 395
Query: 602 GEKSMFIDIFAGPFSVIDEH 661
GE+S+F +IFAGPFSVIDEH
Sbjct: 396 GEESIFYEIFAGPFSVIDEH 415
>gb|AAG51887.1|AC016162_8 ARE1-like protein; 68800-64545 [Arabidopsis thaliana]
Length = 701
Score = 217 bits (553), Expect = 2e-54
Identities = 118/164 (71%), Positives = 131/164 (79%), Gaps = 2/164 (1%)
Frame = +1
Query: 4 KAVSKVFDFIIQKIYSLGKLKINNQIHLQSVISKYKYAILFLKEHGNEVYIKVRGAYIDT 183
KA+SKV+DFI+QK+ +L K K N QI QSV KYKY I FLKEHG EV++ VR AYIDT
Sbjct: 219 KAISKVYDFIVQKLIALRKPKTNIQILQQSVFLKYKYIISFLKEHGKEVFMDVRAAYIDT 278
Query: 184 MNKVLSARSRDYIQALEKSELVIATSSDLIGVEIRSTARFSREKE--KKRSAGFALGERI 357
MNKVLSA + YIQA EK +L IATS+DLIGV+ RST FSR KE K R A FALGERI
Sbjct: 279 MNKVLSAHFQSYIQAFEKLQLDIATSNDLIGVDTRSTGLFSRSKEPLKNRCAVFALGERI 338
Query: 358 NILKEIDQPALIPHIAEASSLKYPCEVLFRSLHKLLMDAAISEH 489
I+KEIDQPALIPHIAEASSLKYP EVLFRSLHKLLMD A SE+
Sbjct: 339 QIIKEIDQPALIPHIAEASSLKYPYEVLFRSLHKLLMDTATSEY 382