BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020096
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36804.3| unnamed protein product [Vitis vinifera]              130   3e-33
ref|XP_003520807.1| PREDICTED: uncharacterized protein LOC100777...   132   2e-32
ref|XP_003562494.1| PREDICTED: DNA polymerase zeta catalytic sub...   132   2e-29
ref|NP_001185344.1| DNA polymerase zeta subunit [Arabidopsis tha...   125   8e-29
ref|NP_176917.2| DNA polymerase zeta subunit [Arabidopsis thalia...   125   8e-29

>emb|CBI36804.3| unnamed protein product [Vitis vinifera]
          Length = 1732

 Score =  130 bits (326), Expect(2) = 3e-33
 Identities = 59/92 (64%), Positives = 75/92 (81%), Gaps = 3/92 (3%)
 Frame = -3

Query: 343 FYGYYKPEELFVKIYL---YYPHEVARVATLLLDGAILGRSYQPHESHIPYLLQFLVEYN 173
           FYGY+  EELFVKIYL   Y+PH+V+R A LLL G++L +S QPHESHIP+LLQFL++YN
Sbjct: 124 FYGYHSSEELFVKIYLNISYHPHDVSRAANLLLGGSVLDKSLQPHESHIPFLLQFLIDYN 183

Query: 172 LYGMGHLHVSKVKFRYPLPDGFIPRGAQQSGR 77
           LYGMGHLH+SK+KFR+P+PD F  R    +G+
Sbjct: 184 LYGMGHLHLSKMKFRHPVPDVFSSRKVNYNGQ 215



 Score = 37.0 bits (84), Expect(2) = 3e-33
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = -1

Query: 81  ADSGHGSCLGMPIWTSSTVLTGWIW 7
           ADS   +CL  P+W SST+  GW+W
Sbjct: 232 ADSSGDTCLSSPVWISSTIPGGWMW 256


>ref|XP_003520807.1| PREDICTED: uncharacterized protein LOC100777934 [Glycine max]
          Length = 2793

 Score =  132 bits (331), Expect(2) = 2e-32
 Identities = 58/78 (74%), Positives = 70/78 (89%)
 Frame = -3

Query: 346 KFYGYYKPEELFVKIYLYYPHEVARVATLLLDGAILGRSYQPHESHIPYLLQFLVEYNLY 167
           KFYGY+  EELFVKIYLYYP +V+R A LLL GA+L +S QP+ESHIP++LQFLV+YNLY
Sbjct: 87  KFYGYHSLEELFVKIYLYYPQDVSRAANLLLAGAVLDKSLQPYESHIPFILQFLVDYNLY 146

Query: 166 GMGHLHVSKVKFRYPLPD 113
           GMGHLH+SK+KFRYP+PD
Sbjct: 147 GMGHLHLSKMKFRYPIPD 164



 Score = 32.0 bits (71), Expect(2) = 2e-32
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -1

Query: 90  NRVADSGHGSCLGMPIWTSSTVLTGWIW 7
           +R ADS   +CL   +W SST+ + W+W
Sbjct: 175 HRKADSDAHACLESKLWMSSTISSEWMW 202


>ref|XP_003562494.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Brachypodium
           distachyon]
          Length = 1720

 Score =  132 bits (333), Expect = 2e-29
 Identities = 60/82 (73%), Positives = 69/82 (84%)
 Frame = -3

Query: 346 KFYGYYKPEELFVKIYLYYPHEVARVATLLLDGAILGRSYQPHESHIPYLLQFLVEYNLY 167
           K YGY+  EE+FVKIYLYYPHEV+R AT LLDGA+L R +QP+ESHIPYLL FLV+YNLY
Sbjct: 127 KLYGYHSCEEIFVKIYLYYPHEVSRAATHLLDGAVLNRVFQPYESHIPYLLHFLVDYNLY 186

Query: 166 GMGHLHVSKVKFRYPLPDGFIP 101
           GMGH+HV+  KFR PLPD F P
Sbjct: 187 GMGHVHVTDFKFRPPLPDDFHP 208


>ref|NP_001185344.1| DNA polymerase zeta subunit [Arabidopsis thaliana]
           gi|332196535|gb|AEE34656.1| DNA polymerase zeta subunit
           [Arabidopsis thaliana]
          Length = 1916

 Score =  125 bits (315), Expect(2) = 8e-29
 Identities = 58/84 (69%), Positives = 72/84 (85%), Gaps = 1/84 (1%)
 Frame = -3

Query: 346 KFYGYYKPEELFVKIYL-YYPHEVARVATLLLDGAILGRSYQPHESHIPYLLQFLVEYNL 170
           KFYGY+  EE FVKIYL Y+P +VAR A+LLL GA+LG+S QP+ESHIP++LQFLV+YNL
Sbjct: 123 KFYGYHSTEEAFVKIYLSYHPPDVARAASLLLAGAVLGKSLQPYESHIPFILQFLVDYNL 182

Query: 169 YGMGHLHVSKVKFRYPLPDGFIPR 98
           YGMGH+H+SK+KFR P+P  F PR
Sbjct: 183 YGMGHVHISKMKFRSPVPHHFRPR 206



 Score = 26.2 bits (56), Expect(2) = 8e-29
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 81  ADSGHGSCLGMPIWTSSTVLTGWIW 7
           A+S   + +  P+W+ ST+   W+W
Sbjct: 226 ANSSAAASVSFPVWSLSTIPGQWMW 250


>ref|NP_176917.2| DNA polymerase zeta subunit [Arabidopsis thaliana]
           gi|34330129|dbj|BAC82450.1| catalytic subunit of
           polymerase zeta [Arabidopsis thaliana]
           gi|332196534|gb|AEE34655.1| DNA polymerase zeta subunit
           [Arabidopsis thaliana]
          Length = 1890

 Score =  125 bits (315), Expect(2) = 8e-29
 Identities = 58/84 (69%), Positives = 72/84 (85%), Gaps = 1/84 (1%)
 Frame = -3

Query: 346 KFYGYYKPEELFVKIYL-YYPHEVARVATLLLDGAILGRSYQPHESHIPYLLQFLVEYNL 170
           KFYGY+  EE FVKIYL Y+P +VAR A+LLL GA+LG+S QP+ESHIP++LQFLV+YNL
Sbjct: 123 KFYGYHSTEEAFVKIYLSYHPPDVARAASLLLAGAVLGKSLQPYESHIPFILQFLVDYNL 182

Query: 169 YGMGHLHVSKVKFRYPLPDGFIPR 98
           YGMGH+H+SK+KFR P+P  F PR
Sbjct: 183 YGMGHVHISKMKFRSPVPHHFRPR 206



 Score = 26.2 bits (56), Expect(2) = 8e-29
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 81  ADSGHGSCLGMPIWTSSTVLTGWIW 7
           A+S   + +  P+W+ ST+   W+W
Sbjct: 226 ANSSAAASVSFPVWSLSTIPGQWMW 250