BLASTX nr result

ID: Coptis25_contig00020071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020071
         (987 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632714.1| PREDICTED: PHD finger protein ING2-like [Vit...   373   e-101
emb|CAN71661.1| hypothetical protein VITISV_016186 [Vitis vinifera]   371   e-100
ref|XP_002319698.1| predicted protein [Populus trichocarpa] gi|2...   353   4e-95
ref|XP_003624615.1| Inhibitor of growth protein [Medicago trunca...   352   6e-95
ref|XP_004147532.1| PREDICTED: PHD finger protein ING2-like [Cuc...   352   1e-94

>ref|XP_003632714.1| PREDICTED: PHD finger protein ING2-like [Vitis vinifera]
           gi|297739750|emb|CBI29932.3| unnamed protein product
           [Vitis vinifera]
          Length = 259

 Score =  373 bits (958), Expect = e-101
 Identities = 182/238 (76%), Positives = 205/238 (86%), Gaps = 5/238 (2%)
 Frame = +1

Query: 31  MAIARTGVYVDDYLEYSSTLPAELQRLLNTMRELDERSQGIVNQTREQTKYCL---AQSL 201
           MAIARTGV+VDDYL+Y+STLPAELQRLLNT+RELDERSQ ++NQTR+QTKYCL   +QS 
Sbjct: 1   MAIARTGVFVDDYLDYASTLPAELQRLLNTIRELDERSQSMINQTRQQTKYCLGLSSQSS 60

Query: 202 KRGYQEEDEVAMEKMRKDIESNQENALSLCTEKVLLARQAYDLIDSHVKRLDEDLINFAD 381
           K+G  EEDEVA EKMRKDIE+NQ+NALSLCTEKVLLA+QA+DLIDSHVKRLDEDL NFA+
Sbjct: 61  KKGNPEEDEVAFEKMRKDIEANQDNALSLCTEKVLLAQQAFDLIDSHVKRLDEDLTNFAE 120

Query: 382 DLKQEGKIALDEPAILPPLPLVPKDEKKKSYFGTSQSK--XXXXXXXXXXXXXXFELMPP 555
           DLKQEGKI+ DEPAILPPLP+VPK+EK+K  +GT Q K                FELMPP
Sbjct: 121 DLKQEGKISPDEPAILPPLPIVPKNEKRKFLYGTPQPKRVDYRDRDWDRERDRDFELMPP 180

Query: 556 PGSHKKNVPAPVDVDQPFDPNEPTYCVCHQVSFGDMIACDNDNCQGGEWFHYSCVGLT 729
           PGSH+K+  AP+DVDQP DPNEPTYCVCHQVSFGDMIACDN+NCQGGEWFHYSCVGLT
Sbjct: 181 PGSHRKDFAAPLDVDQPIDPNEPTYCVCHQVSFGDMIACDNENCQGGEWFHYSCVGLT 238


>emb|CAN71661.1| hypothetical protein VITISV_016186 [Vitis vinifera]
          Length = 259

 Score =  371 bits (953), Expect = e-100
 Identities = 181/238 (76%), Positives = 204/238 (85%), Gaps = 5/238 (2%)
 Frame = +1

Query: 31  MAIARTGVYVDDYLEYSSTLPAELQRLLNTMRELDERSQGIVNQTREQTKYCL---AQSL 201
           MAIARTGV+VDDYL+Y+STLPAELQRLLNT+RELDERSQ ++NQTR+QTKYCL   +QS 
Sbjct: 1   MAIARTGVFVDDYLDYASTLPAELQRLLNTIRELDERSQSMINQTRQQTKYCLGLSSQSS 60

Query: 202 KRGYQEEDEVAMEKMRKDIESNQENALSLCTEKVLLARQAYDLIDSHVKRLDEDLINFAD 381
           K+G  EEDEVA EKMRKDIE+NQ+NALSLCTEKVLLA+QA+DLIDSHVKRLDEDL NFA+
Sbjct: 61  KKGNPEEDEVAFEKMRKDIEANQDNALSLCTEKVLLAQQAFDLIDSHVKRLDEDLTNFAE 120

Query: 382 DLKQEGKIALDEPAILPPLPLVPKDEKKKSYFGTSQSK--XXXXXXXXXXXXXXFELMPP 555
           DLKQEGKI+ DEPAILPPLP+VPK+EK+K  +GT Q K                FELMPP
Sbjct: 121 DLKQEGKISPDEPAILPPLPIVPKNEKRKFLYGTPQPKRVDYRDRDWDRERDRDFELMPP 180

Query: 556 PGSHKKNVPAPVDVDQPFDPNEPTYCVCHQVSFGDMIACDNDNCQGGEWFHYSCVGLT 729
           PGSH+K+   P+DVDQP DPNEPTYCVCHQVSFGDMIACDN+NCQGGEWFHYSCVGLT
Sbjct: 181 PGSHRKDFAXPLDVDQPIDPNEPTYCVCHQVSFGDMIACDNENCQGGEWFHYSCVGLT 238


>ref|XP_002319698.1| predicted protein [Populus trichocarpa] gi|222858074|gb|EEE95621.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  353 bits (906), Expect = 4e-95
 Identities = 178/252 (70%), Positives = 207/252 (82%), Gaps = 19/252 (7%)
 Frame = +1

Query: 31  MAIARTGVYVDDYLEYSSTLPAELQRLLNTMRELDERSQGIVNQTREQTKYCL---AQSL 201
           MAIARTGVYVDDYLEY++TLPAELQRLLNT+RELD+RSQ ++NQTR+QT YCL   +QSL
Sbjct: 1   MAIARTGVYVDDYLEYANTLPAELQRLLNTVRELDDRSQSMINQTRQQTNYCLGLASQSL 60

Query: 202 KRGY-----------QEEDEVAMEKMRKDIESNQENALSLCTEKVLLARQAYDLIDSHVK 348
           ++G             EEDE A+EKMRKDIE+NQ++ALSLCTEKVLLARQAYDLIDSHVK
Sbjct: 61  RKGNGSIYNCYNTNNNEEDE-AVEKMRKDIEANQDSALSLCTEKVLLARQAYDLIDSHVK 119

Query: 349 RLDEDLINFADDLKQEGKIALDEPAILPPLPL-VPKDEKKKSYFGTSQSKXXXXXXXXXX 525
           RLDEDL NFA+DLKQEGK++ DEPAILPPLP+ VPK EK+++++GT QS+          
Sbjct: 120 RLDEDLNNFAEDLKQEGKLSPDEPAILPPLPIIVPKIEKRRNFYGTPQSQSKRIDFRDRD 179

Query: 526 XXXX----FELMPPPGSHKKNVPAPVDVDQPFDPNEPTYCVCHQVSFGDMIACDNDNCQG 693
                   FELMPPPGSH+K+ P PV+V+QP DPNEPTYCVCHQVSFGDMIACDN+NCQG
Sbjct: 180 WDRERDRDFELMPPPGSHRKDFPVPVEVEQPIDPNEPTYCVCHQVSFGDMIACDNENCQG 239

Query: 694 GEWFHYSCVGLT 729
           GEWFHYSCVGLT
Sbjct: 240 GEWFHYSCVGLT 251


>ref|XP_003624615.1| Inhibitor of growth protein [Medicago truncatula]
           gi|124365573|gb|ABN09807.1| Zinc finger, FYVE/PHD-type
           [Medicago truncatula] gi|355499630|gb|AES80833.1|
           Inhibitor of growth protein [Medicago truncatula]
           gi|388504770|gb|AFK40451.1| unknown [Medicago
           truncatula]
          Length = 263

 Score =  352 bits (904), Expect = 6e-95
 Identities = 173/244 (70%), Positives = 201/244 (82%), Gaps = 11/244 (4%)
 Frame = +1

Query: 31  MAIARTGVYVDDYLEYSSTLPAELQRLLNTMRELDERSQGIVNQTREQTKYCLAQSL--- 201
           MAIARTGVYVDDYLEY++TLPAELQRLLNT+RELDERSQ ++NQTR+QTKYC+  S    
Sbjct: 1   MAIARTGVYVDDYLEYANTLPAELQRLLNTVRELDERSQSMINQTRQQTKYCMGFSSHGS 60

Query: 202 KRG--------YQEEDEVAMEKMRKDIESNQENALSLCTEKVLLARQAYDLIDSHVKRLD 357
           K+G          E+D+ ++EKMRK+IE+NQ++ALSLCTEKVLLARQAY+LIDSHVKRLD
Sbjct: 61  KKGNHNYNNNYMNEDDDASIEKMRKEIEANQDSALSLCTEKVLLARQAYELIDSHVKRLD 120

Query: 358 EDLINFADDLKQEGKIALDEPAILPPLPLVPKDEKKKSYFGTSQSKXXXXXXXXXXXXXX 537
           EDL  FA+DLKQEGKI+ DEPAILPPLP+VPK EK++  +GT QSK              
Sbjct: 121 EDLTYFAEDLKQEGKISQDEPAILPPLPIVPKPEKRRHAYGTPQSK--RLDYRERDWDRD 178

Query: 538 FELMPPPGSHKKNVPAPVDVDQPFDPNEPTYCVCHQVSFGDMIACDNDNCQGGEWFHYSC 717
           FELMPPPGSHKK+   P+D+DQP DPNEPTYCVCHQVSFGDMIACDN+NC+GGEWFHYSC
Sbjct: 179 FELMPPPGSHKKDYMIPMDIDQPIDPNEPTYCVCHQVSFGDMIACDNENCRGGEWFHYSC 238

Query: 718 VGLT 729
           VGLT
Sbjct: 239 VGLT 242


>ref|XP_004147532.1| PREDICTED: PHD finger protein ING2-like [Cucumis sativus]
           gi|449510438|ref|XP_004163664.1| PREDICTED: PHD finger
           protein ING2-like [Cucumis sativus]
          Length = 263

 Score =  352 bits (902), Expect = 1e-94
 Identities = 175/242 (72%), Positives = 200/242 (82%), Gaps = 9/242 (3%)
 Frame = +1

Query: 31  MAIARTGVYVDDYLEYSSTLPAELQRLLNTMRELDERSQGIVNQTREQTKYCLA---QSL 201
           MAIARTGVYVDDYLEY+STLPAELQRLLNT+RELD+RSQ +++QTR+QTKYCL    QS 
Sbjct: 1   MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSS 60

Query: 202 KRGY----QEEDEVAMEKMRKDIESNQENALSLCTEKVLLARQAYDLIDSHVKRLDEDLI 369
           K+GY     +++E A EK+RKDIE+NQ+NALSLCTEKVLLARQA DLIDSH+KRLDEDL 
Sbjct: 61  KKGYGNSNTDDEESAFEKLRKDIEANQDNALSLCTEKVLLARQAGDLIDSHIKRLDEDLN 120

Query: 370 NFADDLKQEGKIALDEPAILPPLPLVPKDEKKKSYFGTSQSK--XXXXXXXXXXXXXXFE 543
           NFA+DLKQEGKI+ DEPAILPPLPLV K+E+++  F T QSK                FE
Sbjct: 121 NFAEDLKQEGKISPDEPAILPPLPLVSKNERRRPVFITPQSKRPDYRDRDWDRERDRDFE 180

Query: 544 LMPPPGSHKKNVPAPVDVDQPFDPNEPTYCVCHQVSFGDMIACDNDNCQGGEWFHYSCVG 723
           LMPPPGSHKK+    +DVDQP DPNEPTYC+CHQVSFGDMIACDN+NCQGGEWFHYSCVG
Sbjct: 181 LMPPPGSHKKDFAPSLDVDQPIDPNEPTYCICHQVSFGDMIACDNENCQGGEWFHYSCVG 240

Query: 724 LT 729
           LT
Sbjct: 241 LT 242


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