BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020070
         (1883 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containi...   857   0.0  
emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]   845   0.0  
ref|XP_002519997.1| pentatricopeptide repeat-containing protein,...   805   0.0  
ref|XP_003610900.1| Pentatricopeptide repeat-containing protein ...   794   0.0  
ref|XP_002327945.1| predicted protein [Populus trichocarpa] gi|2...   791   0.0  

>ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
            chloroplastic-like [Vitis vinifera]
          Length = 1442

 Score =  857 bits (2214), Expect = 0.0
 Identities = 427/570 (74%), Positives = 483/570 (84%)
 Frame = +2

Query: 2    QDIDFKISKSTILLMLEAYARAGNIFEVKKIYHGMKAAGYLPTMHLYRCMIGLLSRAKRI 181
            QD+ FKISKS+I LML+A+A AGNIFEVKKIY GMKAAGY PTMHLYR MIGLL++ KR+
Sbjct: 844  QDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRV 903

Query: 182  RDVESMVAEMEETGLKPDLSVFNSLLRMYTAIEDFKKTREVYQQIVESGFKPNEDTYNTL 361
            RDVE+MV+EME    KPDLS++NS+L++YT I DFKKT +VYQ I E+G KP+EDTYNTL
Sbjct: 904  RDVEAMVSEMEVARFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTL 963

Query: 362  ILMYCRDLRPVEGLSLLQDMKKQGLDPKVDTYKSLISACGKQKLWEQAEDLFEGLKSKGV 541
            ILMYCRD RP EGLSL+ +M++ GL+PK+DTYKSLISA GK ++ EQAE+LFEGL SK  
Sbjct: 964  ILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKEC 1023

Query: 542  KLDRSMYHIMLKIYRNSGDLSKAEYLLVSMKEAGVEPTIATMHLLMVSYSSAGQPREAEN 721
            KLDRS YHIM+K++RNSG+ SKAE LL  MKEAGVEPTIATMHLLMVSYS +GQP EAE 
Sbjct: 1024 KLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEK 1083

Query: 722  VLRNLKTLGVDLSTLPYSSVIDAYLKNGDHKLGKEKLLEMKRDGLEPDHRIWTCFIRXXX 901
            VL NLK  G+ LSTLPYSSVIDAYLKNGDH +  +KL+EMK+DGLEPDHRIWTCF+R   
Sbjct: 1084 VLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAAS 1143

Query: 902  XXXXXXXXXXXXXXXRDTGFDLPIRLLAERSESLVVEMDRLLMELGPLVDNAAFNFVNAI 1081
                           RDTGFDLPIRLL E+S+SLV E+D  L +LGPL DNAAFNFVNA+
Sbjct: 1144 LSQHTSEAIVLLKALRDTGFDLPIRLLTEKSDSLVSEVDNCLEKLGPLEDNAAFNFVNAL 1203

Query: 1082 EDMLWAFELRATASWVFQLAIKRKVYRHDVFRVADKDWGADFRKLSPGAALVALTLWLDH 1261
            ED+LWAFELRATASWVFQLA+KR +YRHDVFRVA+KDWGADFRK+S G+ALV LTLWLDH
Sbjct: 1204 EDLLWAFELRATASWVFQLAVKRSIYRHDVFRVAEKDWGADFRKMSAGSALVGLTLWLDH 1263

Query: 1262 MQDASLQGSPESPKSIVLITGTAEYNMVSLDKTLKAYLWEMGSPFLPCKTRSGLLVAKGH 1441
            MQDASLQG P SPKS+VLITGTAEYNMVSL+ TLKA+LWEMGSPFLPCKTRSGLLVAK H
Sbjct: 1264 MQDASLQGYPLSPKSVVLITGTAEYNMVSLNSTLKAFLWEMGSPFLPCKTRSGLLVAKAH 1323

Query: 1442 SLRMWLKDSPFCFDLELKDGPSLPDLNSMQLSEGYFMRIGLIPVFKDIHERLGHVRPKKF 1621
            SLRMWLKDS FC DLELKD PSLP+ NSMQL EG F+R GL+P FKDI ERLG VRPKKF
Sbjct: 1324 SLRMWLKDSSFCLDLELKDAPSLPESNSMQLMEGCFLRRGLVPAFKDITERLGDVRPKKF 1383

Query: 1622 ARLALLTDEKRDKAIQADLEGRKEKLAKMK 1711
            ARLALL DEKRDK I+AD+EG KEKL KMK
Sbjct: 1384 ARLALLPDEKRDKVIRADIEGGKEKLEKMK 1413



 Score =  106 bits (265), Expect = 2e-20
 Identities = 73/283 (25%), Positives = 120/283 (42%)
 Frame = +2

Query: 44   MLEAYARAGNIFEVKKIYHGMKAAGYLPTMHLYRCMIGLLSRAKRIRDVESMVAEMEETG 223
            ++ A +R  N+ E  K+Y+ M A    P +  Y  MI +  R    R+   +  ++E  G
Sbjct: 300  LISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKG 359

Query: 224  LKPDLSVFNSLLRMYTAIEDFKKTREVYQQIVESGFKPNEDTYNTLILMYCRDLRPVEGL 403
              PD   +NSLL  +    +  K +E+ + +V+ GF  +E TYNT+I MY +  +     
Sbjct: 360  FLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAF 419

Query: 404  SLLQDMKKQGLDPKVDTYKSLISACGKQKLWEQAEDLFEGLKSKGVKLDRSMYHIMLKIY 583
             L  DMK  G  P   TY  LI + GK  + ++A +                        
Sbjct: 420  QLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAE------------------------ 455

Query: 584  RNSGDLSKAEYLLVSMKEAGVEPTIATMHLLMVSYSSAGQPREAENVLRNLKTLGVDLST 763
                       ++  M  A V+PT+ T   L+  Y+ AG+  EAE     +   G+    
Sbjct: 456  -----------VMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDH 504

Query: 764  LPYSSVIDAYLKNGDHKLGKEKLLEMKRDGLEPDHRIWTCFIR 892
            L YS ++D  L+  +     +   EM     +PDH ++   +R
Sbjct: 505  LAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLR 547



 Score = 98.2 bits (243), Expect = 7e-18
 Identities = 65/284 (22%), Positives = 133/284 (46%), Gaps = 5/284 (1%)
 Frame = +2

Query: 53  AYARAGNIFEVKKIYHGMKAAGYLPTMHLYRCMIGLLSRAKRIRDVESMVAEM---EETG 223
           ++ RA  ++E   + H      Y P   +   ++ +L +A +    E++  E+    E  
Sbjct: 167 SWQRALEVYEWLNLRHW-----YSPNARMLATILSVLGKANQ----EALAVEIFARAEAA 217

Query: 224 LKPDLSVFNSLLRMYTAIEDFKKTREVYQQIVESGFKPNEDTYNTLILMYCRDLRPVEGL 403
               + V+N+++ +Y     F K +E+   +   G +P+  ++NTLI    +    V  L
Sbjct: 218 SGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNL 277

Query: 404 S--LLQDMKKQGLDPKVDTYKSLISACGKQKLWEQAEDLFEGLKSKGVKLDRSMYHIMLK 577
           +  LL ++++ G+ P + TY +LISAC ++   E+A  ++  + +   + D   Y+ M+ 
Sbjct: 278 AIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMIS 337

Query: 578 IYRNSGDLSKAEYLLVSMKEAGVEPTIATMHLLMVSYSSAGQPREAENVLRNLKTLGVDL 757
           +Y   G   +A  L   ++  G  P   T + L+ +++  G   + + +  ++  +G   
Sbjct: 338 VYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGK 397

Query: 758 STLPYSSVIDAYLKNGDHKLGKEKLLEMKRDGLEPDHRIWTCFI 889
             + Y+++I  Y K G H L  +   +MK  G  PD   +T  I
Sbjct: 398 DEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLI 441



 Score = 90.5 bits (223), Expect = 1e-15
 Identities = 65/293 (22%), Positives = 138/293 (47%), Gaps = 2/293 (0%)
 Frame = +2

Query: 17   KISKSTILLMLEAYARAGNIFEVKKIYHGMKAAGYLPTMHLYRCMIGLLSRAKRIRDVES 196
            ++ +  +L +L +Y  +G   E +++   ++         +   +I +L +A ++ D   
Sbjct: 602  ELDRENLLSILGSYGSSGRHLEARELLDFLREHSSGSHQLINEALIIMLCKAHQLGDALR 661

Query: 197  MVAEMEETGLK-PDLSVFNSLLRMYTAIEDFKKTREVYQQIVESGFKPNEDTYNTLILMY 373
               +  + GL     +++ SLL      E F +  +++  +   G +P++  Y ++++ Y
Sbjct: 662  EYGKARDFGLFCGSFTMYESLLLCCEENELFAEASQIFSDMRFYGVEPSDHLYRSMVVTY 721

Query: 374  CRDLRPVEGLSLLQDMKKQGL-DPKVDTYKSLISACGKQKLWEQAEDLFEGLKSKGVKLD 550
            C+   P     L+   +++GL    V  +  +I A GK KLW++AE L   L+ K   +D
Sbjct: 722  CKMGFPETAHYLIDQAEEKGLLFDDVSIHTGVIEAYGKLKLWQKAESLVGSLRQKCTMVD 781

Query: 551  RSMYHIMLKIYRNSGDLSKAEYLLVSMKEAGVEPTIATMHLLMVSYSSAGQPREAENVLR 730
            R +++ ++  Y  SG   +A  +  +M   G  PT+ +++ LM +    G+  E   V++
Sbjct: 782  RKVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQ 841

Query: 731  NLKTLGVDLSTLPYSSVIDAYLKNGDHKLGKEKLLEMKRDGLEPDHRIWTCFI 889
             L+ +G  +S    + ++DA+   G+    K+    MK  G  P   ++   I
Sbjct: 842  ELQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMI 894



 Score = 71.2 bits (173), Expect = 9e-10
 Identities = 63/311 (20%), Positives = 121/311 (38%), Gaps = 71/311 (22%)
 Frame = +2

Query: 80   EVKKIYHGMKAAGYLPTMHLYRCMI----------------------GLL---------- 163
            E  +I+  M+  G  P+ HLYR M+                      GLL          
Sbjct: 694  EASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHTGV 753

Query: 164  ----SRAKRIRDVESMVAEMEETGLKPDLSVFNSLLRMYTAIEDFKKTREVY-------- 307
                 + K  +  ES+V  + +     D  V+N+L+  Y A   +++ R ++        
Sbjct: 754  IEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRDGP 813

Query: 308  ---------------------------QQIVESGFKPNEDTYNTLILMYCRDLRPVEGLS 406
                                       Q++ + GFK ++ +   ++  +       E   
Sbjct: 814  SPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEVKK 873

Query: 407  LLQDMKKQGLDPKVDTYKSLISACGKQKLWEQAEDLFEGLKSKGVKLDRSMYHIMLKIYR 586
            + Q MK  G  P +  Y+ +I    K K     E +   ++    K D S+++ +LK+Y 
Sbjct: 874  IYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWNSVLKLYT 933

Query: 587  NSGDLSKAEYLLVSMKEAGVEPTIATMHLLMVSYSSAGQPREAENVLRNLKTLGVDLSTL 766
              GD  K   +   ++EAG++P   T + L++ Y    +P E  +++  ++ +G++    
Sbjct: 934  GIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLD 993

Query: 767  PYSSVIDAYLK 799
             Y S+I A+ K
Sbjct: 994  TYKSLISAFGK 1004



 Score = 67.0 bits (162), Expect = 2e-08
 Identities = 59/278 (21%), Positives = 117/278 (42%), Gaps = 1/278 (0%)
 Frame = +2

Query: 44   MLEAYARAGNIFEVKKIYHGMKAAGYLPTMHLYRCMIGLLSRAKRIRDVESMVAEMEETG 223
            +L A+AR GN+ +VK+I   M   G+      Y  +I +  +  +      + ++M+ +G
Sbjct: 370  LLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSG 429

Query: 224  LKPDLSVFNSLLRMYTAIEDFKKTREVYQQIVESGFKPNEDTYNTLILMYCRDLRPVEGL 403
              PD   +  L+         K+  EV  +++ +  KP   T++ LI  Y +  + VE  
Sbjct: 430  RSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAE 489

Query: 404  SLLQDMKKQGLDPKVDTYKSLISACGKQKLWEQAEDLFEGLKSKGVKLDRSMYHIMLKIY 583
                 M + G+ P    Y  ++    +     +A  L++ +     K D ++Y +ML++ 
Sbjct: 490  ETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVL 549

Query: 584  RNSGDLSKAEYLLVSMKE-AGVEPTIATMHLLMVSYSSAGQPREAENVLRNLKTLGVDLS 760
                       ++  M+E  G+   +    L+            A N+LR   + G +L 
Sbjct: 550  GKENREEDVHKVVKDMEELCGMNSQVICSILVKGECFD-----HAANMLRLAISQGCELD 604

Query: 761  TLPYSSVIDAYLKNGDHKLGKEKLLEMKRDGLEPDHRI 874
                 S++ +Y  +G H L   +LL+  R+     H++
Sbjct: 605  RENLLSILGSYGSSGRH-LEARELLDFLREHSSGSHQL 641



 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 51/242 (21%), Positives = 100/242 (41%)
 Frame = +2

Query: 14   FKISKSTILLMLEAYARAGNIFEVKKIYHGMKAAGYLPTMHLYRCMIGLLSRAKRIRDVE 193
            F   + T   ++  Y + G      ++Y  MK +G  P    Y  +I  L +A  I++  
Sbjct: 395  FGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAA 454

Query: 194  SMVAEMEETGLKPDLSVFNSLLRMYTAIEDFKKTREVYQQIVESGFKPNEDTYNTLILMY 373
             +++EM    +KP L  F++L+  Y       +  E +  ++ SG KP+   Y+ ++ + 
Sbjct: 455  EVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDIL 514

Query: 374  CRDLRPVEGLSLLQDMKKQGLDPKVDTYKSLISACGKQKLWEQAEDLFEGLKSKGVKLDR 553
             R     + + L Q+M      P    Y+ ++   GK+   E    + + ++    +L  
Sbjct: 515  LRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVKDME----ELCG 570

Query: 554  SMYHIMLKIYRNSGDLSKAEYLLVSMKEAGVEPTIATMHLLMVSYSSAGQPREAENVLRN 733
                ++  I         A  +L      G E     +  ++ SY S+G+  EA  +L  
Sbjct: 571  MNSQVICSILVKGECFDHAANMLRLAISQGCELDRENLLSILGSYGSSGRHLEARELLDF 630

Query: 734  LK 739
            L+
Sbjct: 631  LR 632


>emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
          Length = 1494

 Score =  845 bits (2184), Expect = 0.0
 Identities = 427/590 (72%), Positives = 483/590 (81%), Gaps = 20/590 (3%)
 Frame = +2

Query: 2    QDIDFKISKSTILLMLEAYARAGNIFEVKKIYHGMKAAGYLPTMHLYRCMIGLLSRAKRI 181
            QD+ FKISKS+I LML+A+A AGNIFEVKKIY GMKAAGY PTMHLYR MIGLL++ KR+
Sbjct: 876  QDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRV 935

Query: 182  RDVESMVAEMEETGLKPDLSVFNSLLRMYTAIEDFKKTREVYQQIVESGFKPNEDTYNTL 361
            RDVE+MV+EME    KPDLS++NS+L++YT I DFKKT +VYQ I E+G KP+EDTYNTL
Sbjct: 936  RDVEAMVSEMEVAXFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTL 995

Query: 362  ILMYCRDLRPVEGLSLLQDMKKQGLDPKVDTYKSLISACGKQKLWEQAEDLFEGLKSKGV 541
            ILMYCRD RP EGLSL+ +M++ GL+PK+DTYKSLISA GK ++ EQAE+LFEGL SK  
Sbjct: 996  ILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKEC 1055

Query: 542  KLDRSMYHIMLKIYRNSGDLSKAEYLLVSMKEAGVEPTIATMHLLMVSYSSAGQPREAEN 721
            KLDRS YHIM+K++RNSG+ SKAE LL  MKEAGVEPTIATMHLLMVSYS +GQP EAE 
Sbjct: 1056 KLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEK 1115

Query: 722  VLRNLKTLGVDLSTLPYSSVIDAYLKNGDHKLGKEKLLEMKRDGLEPDHRIWTCFIRXXX 901
            VL NLK  G+ LSTLPYSSVIDAYLKNGDH +  +KL+EMK+DGLEPDHRIWTCF+R   
Sbjct: 1116 VLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAAS 1175

Query: 902  XXXXXXXXXXXXXXXRDTGFDLPIRLLAERSESLVVEMDRLLMELGPLVDNAAFNFVNAI 1081
                           RDTGFDLPIRLL E+S+SLV E+D  L +LGPL DNAAFNFVNA+
Sbjct: 1176 LSQHTSEAIVLLKALRDTGFDLPIRLLTEKSDSLVSEVDNCLEKLGPLEDNAAFNFVNAL 1235

Query: 1082 EDMLWAFELRATASWVFQLAIKRKVYRHDVFRVADKDWGADFRKLSPGAALVALTLWLDH 1261
            ED+LWAFELRATASWVFQLA+KR +YRHDVFRVA+KDWGADFRK+S G+ALV LTLWLDH
Sbjct: 1236 EDLLWAFELRATASWVFQLAVKRSIYRHDVFRVAEKDWGADFRKMSAGSALVGLTLWLDH 1295

Query: 1262 M--------------------QDASLQGSPESPKSIVLITGTAEYNMVSLDKTLKAYLWE 1381
            M                    QDASLQG P SPKS+VLITGTAEYNMVSL+ TLKA+LWE
Sbjct: 1296 MQASFLITIFVQLMEEYFYFWQDASLQGYPLSPKSVVLITGTAEYNMVSLNSTLKAFLWE 1355

Query: 1382 MGSPFLPCKTRSGLLVAKGHSLRMWLKDSPFCFDLELKDGPSLPDLNSMQLSEGYFMRIG 1561
            MGSPFLPCKTRSGLLVAK HSLRMWLKDS FC DLELKD PSLP+ NSMQL EG F+R G
Sbjct: 1356 MGSPFLPCKTRSGLLVAKAHSLRMWLKDSSFCLDLELKDAPSLPESNSMQLMEGCFLRRG 1415

Query: 1562 LIPVFKDIHERLGHVRPKKFARLALLTDEKRDKAIQADLEGRKEKLAKMK 1711
            L+P FKDI ERLG VRPKKFARLALL DEKRDK I+AD+EG KEKL KMK
Sbjct: 1416 LVPAFKDITERLGDVRPKKFARLALLPDEKRDKVIRADIEGGKEKLEKMK 1465



 Score =  107 bits (266), Expect = 1e-20
 Identities = 73/283 (25%), Positives = 120/283 (42%)
 Frame = +2

Query: 44   MLEAYARAGNIFEVKKIYHGMKAAGYLPTMHLYRCMIGLLSRAKRIRDVESMVAEMEETG 223
            ++ A +R  N+ E  K+Y+ M A    P +  Y  MI +  R    R+   +  ++E  G
Sbjct: 332  LISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKG 391

Query: 224  LKPDLSVFNSLLRMYTAIEDFKKTREVYQQIVESGFKPNEDTYNTLILMYCRDLRPVEGL 403
              PD   +NSLL  +    +  K +E+ + +V+ GF  +E TYNT+I MY +  +     
Sbjct: 392  FLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAF 451

Query: 404  SLLQDMKKQGLDPKVDTYKSLISACGKQKLWEQAEDLFEGLKSKGVKLDRSMYHIMLKIY 583
             L  DMK  G  P   TY  LI + GK  + ++A +                        
Sbjct: 452  QLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAE------------------------ 487

Query: 584  RNSGDLSKAEYLLVSMKEAGVEPTIATMHLLMVSYSSAGQPREAENVLRNLKTLGVDLST 763
                       ++  M  A V+PT+ T   L+  Y+ AG+  EAE     +   G+    
Sbjct: 488  -----------VMSEMLNAXVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDH 536

Query: 764  LPYSSVIDAYLKNGDHKLGKEKLLEMKRDGLEPDHRIWTCFIR 892
            L YS ++D  L+  +     +   EM     +PDH ++   +R
Sbjct: 537  LAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLR 579



 Score = 98.6 bits (244), Expect = 5e-18
 Identities = 65/284 (22%), Positives = 133/284 (46%), Gaps = 5/284 (1%)
 Frame = +2

Query: 53   AYARAGNIFEVKKIYHGMKAAGYLPTMHLYRCMIGLLSRAKRIRDVESMVAEM---EETG 223
            ++ RA  ++E   + H      Y P   +   ++ +L +A +    E++  E+    E  
Sbjct: 199  SWQRALEVYEWLNLRHW-----YSPNARMLATILSVLGKANQ----EALAVEIFARAEAA 249

Query: 224  LKPDLSVFNSLLRMYTAIEDFKKTREVYQQIVESGFKPNEDTYNTLILMYCRDLRPVEGL 403
                + V+N+++ +Y     F K +E+   +   G +P+  ++NTLI    +    V  L
Sbjct: 250  XGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNL 309

Query: 404  S--LLQDMKKQGLDPKVDTYKSLISACGKQKLWEQAEDLFEGLKSKGVKLDRSMYHIMLK 577
            +  LL ++++ G+ P + TY +LISAC ++   E+A  ++  + +   + D   Y+ M+ 
Sbjct: 310  AIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMIS 369

Query: 578  IYRNSGDLSKAEYLLVSMKEAGVEPTIATMHLLMVSYSSAGQPREAENVLRNLKTLGVDL 757
            +Y   G   +A  L   ++  G  P   T + L+ +++  G   + + +  ++  +G   
Sbjct: 370  VYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGK 429

Query: 758  STLPYSSVIDAYLKNGDHKLGKEKLLEMKRDGLEPDHRIWTCFI 889
              + Y+++I  Y K G H L  +   +MK  G  PD   +T  I
Sbjct: 430  DEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLI 473



 Score = 90.5 bits (223), Expect = 1e-15
 Identities = 65/293 (22%), Positives = 138/293 (47%), Gaps = 2/293 (0%)
 Frame = +2

Query: 17   KISKSTILLMLEAYARAGNIFEVKKIYHGMKAAGYLPTMHLYRCMIGLLSRAKRIRDVES 196
            ++ +  +L +L +Y  +G   E +++   ++         +   +I +L +A ++ D   
Sbjct: 634  ELDRENLLSILGSYGSSGRHLEARELLDFLREHSSGSHQLINEALIIMLCKAHQLGDALR 693

Query: 197  MVAEMEETGLK-PDLSVFNSLLRMYTAIEDFKKTREVYQQIVESGFKPNEDTYNTLILMY 373
               +  + GL     +++ SLL      E F +  +++  +   G +P++  Y ++++ Y
Sbjct: 694  EYGKARDFGLFCGSFTMYESLLLCCEENELFAEASQIFSDMRFYGVEPSDHLYRSMVVTY 753

Query: 374  CRDLRPVEGLSLLQDMKKQGL-DPKVDTYKSLISACGKQKLWEQAEDLFEGLKSKGVKLD 550
            C+   P     L+   +++GL    V  +  +I A GK KLW++AE L   L+ K   +D
Sbjct: 754  CKMGFPETAHYLIDQAEEKGLLFDDVSIHTGVIEAYGKLKLWQKAESLVGSLRQKCTMVD 813

Query: 551  RSMYHIMLKIYRNSGDLSKAEYLLVSMKEAGVEPTIATMHLLMVSYSSAGQPREAENVLR 730
            R +++ ++  Y  SG   +A  +  +M   G  PT+ +++ LM +    G+  E   V++
Sbjct: 814  RKVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQ 873

Query: 731  NLKTLGVDLSTLPYSSVIDAYLKNGDHKLGKEKLLEMKRDGLEPDHRIWTCFI 889
             L+ +G  +S    + ++DA+   G+    K+    MK  G  P   ++   I
Sbjct: 874  ELQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMI 926



 Score = 71.6 bits (174), Expect = 7e-10
 Identities = 63/311 (20%), Positives = 121/311 (38%), Gaps = 71/311 (22%)
 Frame = +2

Query: 80   EVKKIYHGMKAAGYLPTMHLYRCMI----------------------GLL---------- 163
            E  +I+  M+  G  P+ HLYR M+                      GLL          
Sbjct: 726  EASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHTGV 785

Query: 164  ----SRAKRIRDVESMVAEMEETGLKPDLSVFNSLLRMYTAIEDFKKTREVY-------- 307
                 + K  +  ES+V  + +     D  V+N+L+  Y A   +++ R ++        
Sbjct: 786  IEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRDGP 845

Query: 308  ---------------------------QQIVESGFKPNEDTYNTLILMYCRDLRPVEGLS 406
                                       Q++ + GFK ++ +   ++  +       E   
Sbjct: 846  SPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEVKK 905

Query: 407  LLQDMKKQGLDPKVDTYKSLISACGKQKLWEQAEDLFEGLKSKGVKLDRSMYHIMLKIYR 586
            + Q MK  G  P +  Y+ +I    K K     E +   ++    K D S+++ +LK+Y 
Sbjct: 906  IYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNSVLKLYT 965

Query: 587  NSGDLSKAEYLLVSMKEAGVEPTIATMHLLMVSYSSAGQPREAENVLRNLKTLGVDLSTL 766
              GD  K   +   ++EAG++P   T + L++ Y    +P E  +++  ++ +G++    
Sbjct: 966  GIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLD 1025

Query: 767  PYSSVIDAYLK 799
             Y S+I A+ K
Sbjct: 1026 TYKSLISAFGK 1036



 Score = 67.4 bits (163), Expect = 1e-08
 Identities = 59/278 (21%), Positives = 117/278 (42%), Gaps = 1/278 (0%)
 Frame = +2

Query: 44   MLEAYARAGNIFEVKKIYHGMKAAGYLPTMHLYRCMIGLLSRAKRIRDVESMVAEMEETG 223
            +L A+AR GN+ +VK+I   M   G+      Y  +I +  +  +      + ++M+ +G
Sbjct: 402  LLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSG 461

Query: 224  LKPDLSVFNSLLRMYTAIEDFKKTREVYQQIVESGFKPNEDTYNTLILMYCRDLRPVEGL 403
              PD   +  L+         K+  EV  +++ +  KP   T++ LI  Y +  + VE  
Sbjct: 462  RSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLRTFSALICGYAKAGKRVEAE 521

Query: 404  SLLQDMKKQGLDPKVDTYKSLISACGKQKLWEQAEDLFEGLKSKGVKLDRSMYHIMLKIY 583
                 M + G+ P    Y  ++    +     +A  L++ +     K D ++Y +ML++ 
Sbjct: 522  ETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVL 581

Query: 584  RNSGDLSKAEYLLVSMKE-AGVEPTIATMHLLMVSYSSAGQPREAENVLRNLKTLGVDLS 760
                       ++  M+E  G+   +    L+            A N+LR   + G +L 
Sbjct: 582  GKENREEDVHKVVKDMEELCGMNSQVICSILVKGECFD-----HAANMLRLAISQGCELD 636

Query: 761  TLPYSSVIDAYLKNGDHKLGKEKLLEMKRDGLEPDHRI 874
                 S++ +Y  +G H L   +LL+  R+     H++
Sbjct: 637  RENLLSILGSYGSSGRH-LEARELLDFLREHSSGSHQL 673



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 51/242 (21%), Positives = 100/242 (41%)
 Frame = +2

Query: 14   FKISKSTILLMLEAYARAGNIFEVKKIYHGMKAAGYLPTMHLYRCMIGLLSRAKRIRDVE 193
            F   + T   ++  Y + G      ++Y  MK +G  P    Y  +I  L +A  I++  
Sbjct: 427  FGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAA 486

Query: 194  SMVAEMEETGLKPDLSVFNSLLRMYTAIEDFKKTREVYQQIVESGFKPNEDTYNTLILMY 373
             +++EM    +KP L  F++L+  Y       +  E +  ++ SG KP+   Y+ ++ + 
Sbjct: 487  EVMSEMLNAXVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDIL 546

Query: 374  CRDLRPVEGLSLLQDMKKQGLDPKVDTYKSLISACGKQKLWEQAEDLFEGLKSKGVKLDR 553
             R     + + L Q+M      P    Y+ ++   GK+   E    + + ++    +L  
Sbjct: 547  LRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVKDME----ELCG 602

Query: 554  SMYHIMLKIYRNSGDLSKAEYLLVSMKEAGVEPTIATMHLLMVSYSSAGQPREAENVLRN 733
                ++  I         A  +L      G E     +  ++ SY S+G+  EA  +L  
Sbjct: 603  MNSQVICSILVKGECFDHAANMLRLAISQGCELDRENLLSILGSYGSSGRHLEARELLDF 662

Query: 734  LK 739
            L+
Sbjct: 663  LR 664


>ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223540761|gb|EEF42321.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1429

 Score =  805 bits (2078), Expect = 0.0
 Identities = 405/592 (68%), Positives = 480/592 (81%), Gaps = 2/592 (0%)
 Frame = +2

Query: 2    QDIDFKISKSTILLMLEAYARAGNIFEVKKIYHGMKAAGYLPTMHLYRCMIGLLSRAKRI 181
            QD+ F+ISKS+ILL+L+A+AR  NI E KKIY GMKAAGY PTMHLYR MIGLL + KR+
Sbjct: 832  QDMGFQISKSSILLILDAFARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRV 891

Query: 182  RDVESMVAEMEETGLKPDLSVFNSLLRMYTAIEDFKKTREVYQQIVESGFKPNEDTYNTL 361
            RDVE+MV EMEE G +PDLS++NS+LR+YT I+DF+KT ++YQ+I E G +P+EDTYNTL
Sbjct: 892  RDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTL 951

Query: 362  ILMYCRDLRPVEGLSLLQDMKKQGLDPKVDTYKSLISACGKQKLWEQAEDLFEGLKSKGV 541
            I+MYCRD RP EG SL+ +M++ GL+PK+DTYKSLI+A GKQ+L   AE+LFE L SKG 
Sbjct: 952  IVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQQLVVDAEELFEELLSKGS 1011

Query: 542  KLDRSMYHIMLKIYRNSGDLSKAEYLLVSMKEAGVEPTIATMHLLMVSYSSAGQPREAEN 721
            KLDRS YHIM+KIYRNSG+ SKAE LL  MK+AGVEPTIATMHLLMVSY S+GQP+EAE 
Sbjct: 1012 KLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEK 1071

Query: 722  VLRNLKTLGVDLSTLPYSSVIDAYLKNGDHKLGKEKLLEMKRDGLEPDHRIWTCFIRXXX 901
            VL NLK +G+ LSTLPYSSVIDAYLKN D+ +G +KL+EMK++GLEPDHRIWTCFIR   
Sbjct: 1072 VLTNLKEMGLSLSTLPYSSVIDAYLKNKDYSVGIQKLVEMKKEGLEPDHRIWTCFIRAAS 1131

Query: 902  XXXXXXXXXXXXXXXRDTGFDLPIRLLAERSESLVVEMDRLLMELGPLVDNAAFNFVNAI 1081
                           +D+GFDLP RL+ ERS+SLV+E+D  L  L  + DNAAFNFVNA+
Sbjct: 1132 LSEHTHDAILLLQALQDSGFDLPSRLITERSDSLVLEVDHCLEMLETMEDNAAFNFVNAL 1191

Query: 1082 EDMLWAFELRATASWVFQLAIKRKVYRHDVFRVADKDWGADFRKLSPGAALVALTLWLDH 1261
            ED+LWAFELRATASWVF+LA+KR +Y HDVFRVA++DWGADFRKLS GAAL         
Sbjct: 1192 EDLLWAFELRATASWVFRLAVKRSIYCHDVFRVAEQDWGADFRKLSGGAAL--------- 1242

Query: 1262 MQDASLQGSPESPKSIVLITGTAEYNMVSLDKTLKAYLWEMGSPFLPCKTRSGLLVAKGH 1441
              DASLQG P SPKS+VLITGTAEYNMVSLD TLKA LWEMGSPFLPC+TRSGLLVAK H
Sbjct: 1243 --DASLQGYPASPKSVVLITGTAEYNMVSLDNTLKACLWEMGSPFLPCRTRSGLLVAKAH 1300

Query: 1442 SLRMWLKDSPFCFDLELKDGPSLPDLNSMQLSEGYFMRIGLIPVFKDIHERLGHVRPKKF 1621
            SLRMWLKDSPFC DLELKD PSLP+ NSMQL EG F+R GL+P FK+I+E+LG VRPKKF
Sbjct: 1301 SLRMWLKDSPFCLDLELKDAPSLPESNSMQLIEGCFIRRGLVPAFKEINEKLGFVRPKKF 1360

Query: 1622 ARLALLTDEKRDKAIQADLEGRKEKLAKMKTTSALAKPGKKTKF--GRYIRR 1771
            A+LALL+D+KR KAI AD+EGRKEKL K+K+   L +  K  K    R+IR+
Sbjct: 1361 AKLALLSDDKRQKAIHADIEGRKEKLEKLKSKVDLERKNKTNKLRRRRFIRK 1412



 Score =  108 bits (269), Expect = 6e-21
 Identities = 70/285 (24%), Positives = 137/285 (48%), Gaps = 5/285 (1%)
 Frame = +2

Query: 50  EAYARAGNIFEVKKIYHGMKAAGYLPTMHLYRCMIGLLSRAKRIRDVESMVAEM---EET 220
           E + RA  +FE   + H      Y P   +   ++ +L +A +    E++  E+    E+
Sbjct: 154 ENWQRALEVFEWLNLRHW-----YSPNARMLATILAVLGKANQ----EALAVEIFIRAES 204

Query: 221 GLKPDLSVFNSLLRMYTAIEDFKKTREVYQQIVESGFKPNEDTYNTLI--LMYCRDLRPV 394
            +   + V+N+++ +Y     F K + +   + E G +P+  ++NTLI   +    + P 
Sbjct: 205 TVDNTVQVYNAMMGVYARTGRFNKVQGMLDLMRERGCEPDLVSFNTLINARLKAGAMTPN 264

Query: 395 EGLSLLQDMKKQGLDPKVDTYKSLISACGKQKLWEQAEDLFEGLKSKGVKLDRSMYHIML 574
             + LL ++++ GL P + TY +LISAC ++   E+A  +F+ +++   + D   Y+ M+
Sbjct: 265 VAIELLNEVRRSGLRPDIITYNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMI 324

Query: 575 KIYRNSGDLSKAEYLLVSMKEAGVEPTIATMHLLMVSYSSAGQPREAENVLRNLKTLGVD 754
            +Y   G   KAE L   ++  G  P   T + L+ +++  G   + + +   +  +G  
Sbjct: 325 SVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGFI 384

Query: 755 LSTLPYSSVIDAYLKNGDHKLGKEKLLEMKRDGLEPDHRIWTCFI 889
              + Y+++I  Y K G H L  +   +MK  G  PD   +T  I
Sbjct: 385 RDEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVLI 429



 Score =  108 bits (269), Expect = 6e-21
 Identities = 64/268 (23%), Positives = 126/268 (47%)
 Frame = +2

Query: 89   KIYHGMKAAGYLPTMHLYRCMIGLLSRAKRIRDVESMVAEMEETGLKPDLSVFNSLLRMY 268
            ++ + ++ +G  P +  Y  +I   SR   + +   +  +ME    +PDL  +N+++ +Y
Sbjct: 268  ELLNEVRRSGLRPDIITYNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVY 327

Query: 269  TAIEDFKKTREVYQQIVESGFKPNEDTYNTLILMYCRDLRPVEGLSLLQDMKKQGLDPKV 448
                   K  ++++++   G+ P+  TYN+L+  + R+    +   +  +M + G     
Sbjct: 328  GRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDE 387

Query: 449  DTYKSLISACGKQKLWEQAEDLFEGLKSKGVKLDRSMYHIMLKIYRNSGDLSKAEYLLVS 628
             TY ++I   GKQ     A  L+  +K  G   D   Y +++     +  + +A  ++  
Sbjct: 388  MTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVLIDSLGKANKMVEAANVMSE 447

Query: 629  MKEAGVEPTIATMHLLMVSYSSAGQPREAENVLRNLKTLGVDLSTLPYSSVIDAYLKNGD 808
            M   GV+PT+ T   L+  Y+ AGQ  EAE     ++  G+    L YS ++D +L+  +
Sbjct: 448  MLNIGVKPTLRTYSALICGYARAGQRLEAEETFDCMRRSGIRPDQLAYSVMLDVFLRFDE 507

Query: 809  HKLGKEKLLEMKRDGLEPDHRIWTCFIR 892
                     EM RDG+ PD  ++   +R
Sbjct: 508  ATKAMMLYREMVRDGITPDPTVYGAMLR 535



 Score = 83.2 bits (204), Expect = 2e-13
 Identities = 62/296 (20%), Positives = 136/296 (45%), Gaps = 5/296 (1%)
 Frame = +2

Query: 17   KISKSTILLMLEAYARAGNIFEVKKIYHGMKAAGYLPTMHLYRCMIGLLSRAKRIRDVES 196
            +I    +L +L +Y+ +G   E   +   +K         +    I  L +AK++   ++
Sbjct: 590  EIDSENLLSILSSYSSSGRQAEALDLLQFLKGHVSKSNQLVAEASIVTLCKAKQL---DA 646

Query: 197  MVAEMEETG----LKPDLSVFNSLLRMYTAIEDFKKTREVYQQIVESGFKPNEDTYNTLI 364
             + E  +T          +++ SL++     E   +  +++  +  +G KP++  Y +++
Sbjct: 647  ALKEYNDTREFDWFTGSCTMYESLIQCCEENEFTAEASQIFSDMRFNGVKPSKSLYRSMV 706

Query: 365  LMYCRDLRPVEGLSLLQDMKKQGLD-PKVDTYKSLISACGKQKLWEQAEDLFEGLKSKGV 541
            LMYC+   P     L+   + +G+   K+    ++I   GK KLW++AE L   L+ +  
Sbjct: 707  LMYCKMGFPETAHYLIDLAEIEGMPFDKISIDVAVIETYGKLKLWQKAESLVGNLRQRCT 766

Query: 542  KLDRSMYHIMLKIYRNSGDLSKAEYLLVSMKEAGVEPTIATMHLLMVSYSSAGQPREAEN 721
             +DR +++ +++ Y  SG   +A  +  +M   G  PT+ +++ L+ +    G+  E   
Sbjct: 767  NVDRKVWNALIQAYAASGCYEQARAVFNTMMRDGPSPTVDSINGLLQALIVDGRLEELYV 826

Query: 722  VLRNLKTLGVDLSTLPYSSVIDAYLKNGDHKLGKEKLLEMKRDGLEPDHRIWTCFI 889
            V + ++ +G  +S      ++DA+ +  +    K+    MK  G  P   ++   I
Sbjct: 827  VTQEIQDMGFQISKSSILLILDAFARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMI 882



 Score = 80.1 bits (196), Expect = 2e-12
 Identities = 52/238 (21%), Positives = 111/238 (46%)
 Frame = +2

Query: 149  MIGLLSRAKRIRDVESMVAEMEETGLKPDLSVFNSLLRMYTAIEDFKKTREVYQQIVESG 328
            +I    + K  +  ES+V  + +     D  V+N+L++ Y A   +++ R V+  ++  G
Sbjct: 741  VIETYGKLKLWQKAESLVGNLRQRCTNVDRKVWNALIQAYAASGCYEQARAVFNTMMRDG 800

Query: 329  FKPNEDTYNTLILMYCRDLRPVEGLSLLQDMKKQGLDPKVDTYKSLISACGKQKLWEQAE 508
              P  D+ N L+     D R  E   + Q+++  G      +   ++ A  +     +A+
Sbjct: 801  PSPTVDSINGLLQALIVDGRLEELYVVTQEIQDMGFQISKSSILLILDAFARVSNIAEAK 860

Query: 509  DLFEGLKSKGVKLDRSMYHIMLKIYRNSGDLSKAEYLLVSMKEAGVEPTIATMHLLMVSY 688
             +++G+K+ G      +Y IM+ +      +   E ++  M+EAG  P ++  + ++  Y
Sbjct: 861  KIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLY 920

Query: 689  SSAGQPREAENVLRNLKTLGVDLSTLPYSSVIDAYLKNGDHKLGKEKLLEMKRDGLEP 862
            +     R+   + + +K  G+      Y+++I  Y ++   + G   + EM+R GLEP
Sbjct: 921  TGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEP 978



 Score = 67.0 bits (162), Expect = 2e-08
 Identities = 48/232 (20%), Positives = 99/232 (42%)
 Frame = +2

Query: 44  MLEAYARAGNIFEVKKIYHGMKAAGYLPTMHLYRCMIGLLSRAKRIRDVESMVAEMEETG 223
           +L A+AR GN+ +VK+I +                                   EM + G
Sbjct: 358 LLYAFAREGNVDKVKEICN-----------------------------------EMVQMG 382

Query: 224 LKPDLSVFNSLLRMYTAIEDFKKTREVYQQIVESGFKPNEDTYNTLILMYCRDLRPVEGL 403
              D   +N+++ MY          ++Y+ +  SG  P+  TY  LI    +  + VE  
Sbjct: 383 FIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVLIDSLGKANKMVEAA 442

Query: 404 SLLQDMKKQGLDPKVDTYKSLISACGKQKLWEQAEDLFEGLKSKGVKLDRSMYHIMLKIY 583
           +++ +M   G+ P + TY +LI    +     +AE+ F+ ++  G++ D+  Y +ML ++
Sbjct: 443 NVMSEMLNIGVKPTLRTYSALICGYARAGQRLEAEETFDCMRRSGIRPDQLAYSVMLDVF 502

Query: 584 RNSGDLSKAEYLLVSMKEAGVEPTIATMHLLMVSYSSAGQPREAENVLRNLK 739
               + +KA  L   M   G+ P       ++ +     +  + + ++R+++
Sbjct: 503 LRFDEATKAMMLYREMVRDGITPDPTVYGAMLRNLGRENKVEDIQRIIRDME 554



 Score = 65.1 bits (157), Expect = 6e-08
 Identities = 50/271 (18%), Positives = 116/271 (42%), Gaps = 1/271 (0%)
 Frame = +2

Query: 80   EVKKIYHGMKAAGYLPTMHLYRCMIGLLSRAKRIRDVESMVAEMEETGLKPD-LSVFNSL 256
            E  +I+  M+  G  P+  LYR M+ +  +         ++   E  G+  D +S+  ++
Sbjct: 682  EASQIFSDMRFNGVKPSKSLYRSMVLMYCKMGFPETAHYLIDLAEIEGMPFDKISIDVAV 741

Query: 257  LRMYTAIEDFKKTREVYQQIVESGFKPNEDTYNTLILMYCRDLRPVEGLSLLQDMKKQGL 436
            +  Y  ++ ++K   +   + +     +   +N LI  Y       +  ++   M + G 
Sbjct: 742  IETYGKLKLWQKAESLVGNLRQRCTNVDRKVWNALIQAYAASGCYEQARAVFNTMMRDGP 801

Query: 437  DPKVDTYKSLISACGKQKLWEQAEDLFEGLKSKGVKLDRSMYHIMLKIYRNSGDLSKAEY 616
             P VD+   L+ A       E+   + + ++  G ++ +S   ++L  +    ++++A+ 
Sbjct: 802  SPTVDSINGLLQALIVDGRLEELYVVTQEIQDMGFQISKSSILLILDAFARVSNIAEAKK 861

Query: 617  LLVSMKEAGVEPTIATMHLLMVSYSSAGQPREAENVLRNLKTLGVDLSTLPYSSVIDAYL 796
            +   MK AG  PT+    +++       + R+ E ++  ++  G       ++S++  Y 
Sbjct: 862  IYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYT 921

Query: 797  KNGDHKLGKEKLLEMKRDGLEPDHRIWTCFI 889
               D +   +    +K DGL+PD   +   I
Sbjct: 922  GIDDFRKTVQIYQRIKEDGLQPDEDTYNTLI 952



 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 42/202 (20%), Positives = 95/202 (47%), Gaps = 1/202 (0%)
 Frame = +2

Query: 32   TILLMLEAYARAGNIFEVKKIYHGMKAAGYLPTMHLYRCMIGLLSRAKRIRDVESMVAEM 211
            T  +++++  +A  + E   +   M   G  PT+  Y  +I   +RA +  + E     M
Sbjct: 424  TYTVLIDSLGKANKMVEAANVMSEMLNIGVKPTLRTYSALICGYARAGQRLEAEETFDCM 483

Query: 212  EETGLKPDLSVFNSLLRMYTAIEDFKKTREVYQQIVESGFKPNEDTYNTLILMYCRDLRP 391
              +G++PD   ++ +L ++   ++  K   +Y+++V  G  P+   Y  ++    R+ + 
Sbjct: 484  RRSGIRPDQLAYSVMLDVFLRFDEATKAMMLYREMVRDGITPDPTVYGAMLRNLGRENKV 543

Query: 392  VEGLSLLQDMKKQ-GLDPKVDTYKSLISACGKQKLWEQAEDLFEGLKSKGVKLDRSMYHI 568
             +   +++DM++  G++P     +++ S   K + +E A  +     S   ++D      
Sbjct: 544  EDIQRIIRDMEEVCGMNP-----QAIASILVKGECYEDAAGMLRLAISGSDEIDSENLLS 598

Query: 569  MLKIYRNSGDLSKAEYLLVSMK 634
            +L  Y +SG  ++A  LL  +K
Sbjct: 599  ILSSYSSSGRQAEALDLLQFLK 620


>ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355512235|gb|AES93858.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1508

 Score =  794 bits (2051), Expect = 0.0
 Identities = 395/590 (66%), Positives = 469/590 (79%), Gaps = 1/590 (0%)
 Frame = +2

Query: 2    QDIDFKISKSTILLMLEAYARAGNIFEVKKIYHGMKAAGYLPTMHLYRCMIGLLSRAKRI 181
            QD+D KISKS+ILLMLEA+A+AGN+FEV+K+Y+GMKAAGY PTMHLYR MIGLL R KR+
Sbjct: 886  QDMDLKISKSSILLMLEAFAQAGNLFEVQKVYNGMKAAGYFPTMHLYRLMIGLLCRFKRV 945

Query: 182  RDVESMVAEMEETGLKPDLSVFNSLLRMYTAIEDFKKTREVYQQIVESGFKPNEDTYNTL 361
            RDV  M++EM E G KPDL +FNS+L++Y++IE+F+    +YQ I ++G  P+E+TYNTL
Sbjct: 946  RDVRVMLSEMGEAGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTL 1005

Query: 362  ILMYCRDLRPVEGLSLLQDMKKQGLDPKVDTYKSLISACGKQKLWEQAEDLFEGLKSKGV 541
            I MYCRD RP EGLSL+  MK  GL+PK DTY+S+I+A  KQ+L++QAE+LFE L+S G 
Sbjct: 1006 ITMYCRDHRPEEGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGY 1065

Query: 542  KLDRSMYHIMLKIYRNSGDLSKAEYLLVSMKEAGVEPTIATMHLLMVSYSSAGQPREAEN 721
            KLDRS YH+M+K+YR SGD  KAE LL  MKEAG+EP  ATMHLLMVSY  +GQP EA+ 
Sbjct: 1066 KLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAGIEPNTATMHLLMVSYGKSGQPEEADR 1125

Query: 722  VLRNLKTLGVDLSTLPYSSVIDAYLKNGDHKLGKEKLLEMKRDGLEPDHRIWTCFIRXXX 901
            +L+NL+T+G  L TLPYSSVIDAYLK GD K G EKL EMK   +EPDHRIWTCFIR   
Sbjct: 1126 ILKNLRTMGAVLDTLPYSSVIDAYLKKGDAKAGIEKLTEMKEAAIEPDHRIWTCFIRAAS 1185

Query: 902  XXXXXXXXXXXXXXXRDTGFDLPIRLLAERSESLVVEMDRLLMELGPLVDNAAFNFVNAI 1081
                           +  GFDLPIRLL E+SESLV E+D+ L  L  + DNAAFNFVNA+
Sbjct: 1186 LSGEVNDANNLLNALQAVGFDLPIRLLGEKSESLVSEVDQCLGRLEHVEDNAAFNFVNAL 1245

Query: 1082 EDMLWAFELRATASWVFQLAIKRKVYRHDVFRVADKDWGADFRKLSPGAALVALTLWLDH 1261
             D+LWAFELRATASWVFQLAIKR +YRHD+FRVA KDWGADFRKLS G+ALV LTLWLDH
Sbjct: 1246 VDLLWAFELRATASWVFQLAIKRSIYRHDIFRVAQKDWGADFRKLSAGSALVGLTLWLDH 1305

Query: 1262 MQDASLQGSPESPKSIVLITGTAEYNMVSLDKTLKAYLWEMGSPFLPCKTRSGLLVAKGH 1441
            MQDASLQG PESPKS+VLITGTAEYNMVSLD TLKA+LWEMGSPFLPCKTR G+LVAK H
Sbjct: 1306 MQDASLQGYPESPKSVVLITGTAEYNMVSLDSTLKAFLWEMGSPFLPCKTRHGVLVAKAH 1365

Query: 1442 SLRMWLKDSPFCFDLELKDGPSLPDLNSMQLSEGYFMRIGLIPVFKDIHERLGHVRPKKF 1621
            SLRMWLKDS FC DLELKD P+LP LNSMQL  G F+R GL+P F +I E+L  V PKKF
Sbjct: 1366 SLRMWLKDSSFCLDLELKDSPNLPKLNSMQLINGCFIRRGLVPAFNEITEKLKVVSPKKF 1425

Query: 1622 ARLALLTDEKRDKAIQADLEGRKEKLAKMKTTS-ALAKPGKKTKFGRYIR 1768
            +RLALL D+KR K +QAD++GRKEKL K+K +   L +  KK +  ++IR
Sbjct: 1426 SRLALLPDDKRSKVMQADVDGRKEKLEKLKKSDPRLLRKIKKIRKKKFIR 1475



 Score =  114 bits (285), Expect = 9e-23
 Identities = 62/250 (24%), Positives = 121/250 (48%)
 Frame = +2

Query: 116  GYLPTMHLYRCMIGLLSRAKRIRDVESMVAEMEETGLKPDLSVFNSLLRMYTAIEDFKKT 295
            G  P +  Y  +I   SR   +++   + + ME    +PDL  +N+++ +Y       K 
Sbjct: 331  GLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFALKA 390

Query: 296  REVYQQIVESGFKPNEDTYNTLILMYCRDLRPVEGLSLLQDMKKQGLDPKVDTYKSLISA 475
              +++++  +GF P+  TYN+L+  + ++    +   + ++M K G      TY ++I  
Sbjct: 391  EHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHM 450

Query: 476  CGKQKLWEQAEDLFEGLKSKGVKLDRSMYHIMLKIYRNSGDLSKAEYLLVSMKEAGVEPT 655
             GK    ++A  L+  +KS G   D   Y +++ +   +  + +A  ++  M +AGV+PT
Sbjct: 451  YGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPT 510

Query: 656  IATMHLLMVSYSSAGQPREAENVLRNLKTLGVDLSTLPYSSVIDAYLKNGDHKLGKEKLL 835
            + T   L+ +Y+  G+  EAE     ++  G+    L YS ++D +L+  + K       
Sbjct: 511  LHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKAAALYQ 570

Query: 836  EMKRDGLEPD 865
            EM   G  PD
Sbjct: 571  EMIEAGFTPD 580



 Score =  111 bits (277), Expect = 8e-22
 Identities = 68/270 (25%), Positives = 130/270 (48%), Gaps = 17/270 (6%)
 Frame = +2

Query: 131  MHLYRCMI---GLLSRAKRIRDVESMVAEMEETGLKPDL------------SVFNSLLRM 265
            + LY C+       + A+ +  + S++ +  + G+  ++             V+N+++ +
Sbjct: 214  LELYECLTMQQWYATNARMVATILSVLGKANQEGIAVEIFAKAESVIADTVQVYNAMMGV 273

Query: 266  YTAIEDFKKTREVYQQIVESGFKPNEDTYNTLILMYCRDLRPVEGLS--LLQDMKKQGLD 439
            Y    +F+K  E++  + E G +P+  ++NTLI    +    V GL+  LL ++ K GL 
Sbjct: 274  YARNGNFEKVNEMFNLMRERGCEPDIVSFNTLINAKVKSCATVSGLAIELLDEVGKFGLR 333

Query: 440  PKVDTYKSLISACGKQKLWEQAEDLFEGLKSKGVKLDRSMYHIMLKIYRNSGDLSKAEYL 619
            P + TY +LISAC ++   ++A  +F  ++S   + D   Y+ M+ +Y   G   KAE+L
Sbjct: 334  PDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFALKAEHL 393

Query: 620  LVSMKEAGVEPTIATMHLLMVSYSSAGQPREAENVLRNLKTLGVDLSTLPYSSVIDAYLK 799
               +K  G  P   T + L+ ++S  G   +  ++   +  +G     + Y+++I  Y K
Sbjct: 394  FEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGK 453

Query: 800  NGDHKLGKEKLLEMKRDGLEPDHRIWTCFI 889
            +G H        +MK  G  PD   +T  I
Sbjct: 454  HGRHDEALRLYRDMKSSGRNPDAVTYTVLI 483



 Score =  107 bits (268), Expect = 8e-21
 Identities = 73/286 (25%), Positives = 133/286 (46%), Gaps = 4/286 (1%)
 Frame = +2

Query: 44   MLEAYARAGNIFEVKKIYHGMKAAGYLPTMHLYRCMIGLLSRAKRIRDVESMVAEMEET- 220
            M+  YAR GN  +V ++++ M+  G  P +  +  +I   ++ K    V  +  E+ +  
Sbjct: 270  MMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLIN--AKVKSCATVSGLAIELLDEV 327

Query: 221  ---GLKPDLSVFNSLLRMYTAIEDFKKTREVYQQIVESGFKPNEDTYNTLILMYCRDLRP 391
               GL+PD+  +N+L+   +   + K+   V+  +  +  +P+  TYN +I +Y R    
Sbjct: 328  GKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFA 387

Query: 392  VEGLSLLQDMKKQGLDPKVDTYKSLISACGKQKLWEQAEDLFEGLKSKGVKLDRSMYHIM 571
            ++   L + +K  G  P   TY SL+ A  K+   E+  D+ E +   G   D   Y+ +
Sbjct: 388  LKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTI 447

Query: 572  LKIYRNSGDLSKAEYLLVSMKEAGVEPTIATMHLLMVSYSSAGQPREAENVLRNLKTLGV 751
            + +Y   G   +A  L   MK +G  P   T  +L+     A +  EA  V+  +   GV
Sbjct: 448  IHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGV 507

Query: 752  DLSTLPYSSVIDAYLKNGDHKLGKEKLLEMKRDGLEPDHRIWTCFI 889
              +   YS++I AY K G     +E    M+  G++ DH  ++  +
Sbjct: 508  KPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVML 553



 Score =  106 bits (265), Expect = 2e-20
 Identities = 80/313 (25%), Positives = 134/313 (42%), Gaps = 35/313 (11%)
 Frame = +2

Query: 44   MLEAYARAGNIFEVKKIYHGMKAAGYLPTMHLYRCMIGLLSRAKRIRDVESMVAEMEETG 223
            ++ A +R  N+ E   ++  M++    P +  Y  MI +  R       E +  +++  G
Sbjct: 342  LISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFALKAEHLFEKLKSNG 401

Query: 224  LKPDLSVFNSLLRMYTAIEDFKKTREVYQQIVESGFKPNEDTYNTLILMYCRDLRPVEGL 403
              PD   +NSLL  ++   + +K R++ +++V+ GF  +E TYNT+I MY +  R  E L
Sbjct: 402  FSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEAL 461

Query: 404  SLLQDMKKQGLDPKVDTYKSLISACGKQKLWE---------------------------- 499
             L +DMK  G +P   TY  LI   GK    E                            
Sbjct: 462  RLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPTLHTYSALICAY 521

Query: 500  -------QAEDLFEGLKSKGVKLDRSMYHIMLKIYRNSGDLSKAEYLLVSMKEAGVEPTI 658
                   +AE+ F  ++  G+K D   Y +ML  +    ++ KA  L   M EAG  P  
Sbjct: 522  AKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKAAALYQEMIEAGFTPDT 581

Query: 659  ATMHLLMVSYSSAGQPREAENVLRNLKTLGVDLSTLPYSSVIDAYLKNGDHKLGKEKLLE 838
                +++ +          E V+++ K LG  ++    SSV+   +K G +  G + L  
Sbjct: 582  GLYEVMLPALVRENMGDVIERVVQDTKELG-SMNPHDISSVL---VKGGCYDHGAKMLKV 637

Query: 839  MKRDGLEPDHRIW 877
               +G E D  I+
Sbjct: 638  AISNGYELDREIF 650



 Score = 95.5 bits (236), Expect = 4e-17
 Identities = 66/256 (25%), Positives = 118/256 (46%), Gaps = 2/256 (0%)
 Frame = +2

Query: 128  TMHLYRCMIGLLSRAKRIRDVESMVAEMEETGLKPDLSVFNSLL--RMYTAIEDFKKTRE 301
            T+ +Y  M+G+ +R      V  M   M E G +PD+  FN+L+  ++ +         E
Sbjct: 263  TVQVYNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLINAKVKSCATVSGLAIE 322

Query: 302  VYQQIVESGFKPNEDTYNTLILMYCRDLRPVEGLSLLQDMKKQGLDPKVDTYKSLISACG 481
            +  ++ + G +P+  TYNTLI    R+    E + +   M+     P + TY ++IS  G
Sbjct: 323  LLDEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYG 382

Query: 482  KQKLWEQAEDLFEGLKSKGVKLDRSMYHIMLKIYRNSGDLSKAEYLLVSMKEAGVEPTIA 661
            +     +AE LFE LKS G   D   Y+ +L  +   G+  K   +   M + G      
Sbjct: 383  RCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEM 442

Query: 662  TMHLLMVSYSSAGQPREAENVLRNLKTLGVDLSTLPYSSVIDAYLKNGDHKLGKEKLLEM 841
            T + ++  Y   G+  EA  + R++K+ G +   + Y+ +ID   K    +   + + EM
Sbjct: 443  TYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEM 502

Query: 842  KRDGLEPDHRIWTCFI 889
               G++P    ++  I
Sbjct: 503  LDAGVKPTLHTYSALI 518



 Score = 90.5 bits (223), Expect = 1e-15
 Identities = 67/323 (20%), Positives = 136/323 (42%), Gaps = 31/323 (9%)
 Frame = +2

Query: 14   FKISKSTILLMLEAYARAGNIFEVKKIYHGMKAAGYLPTMHLYRCMIGLLSRAKRIRDVE 193
            F   + T   ++  Y + G   E  ++Y  MK++G  P    Y  +I LL +A +I +  
Sbjct: 437  FGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEAS 496

Query: 194  SMVAEMEETGLKPDLSVFNSLLRMYTAIEDFKKTREVYQQIVESGFKPNEDTYNTLILMY 373
             +++EM + G+KP L  +++L+  Y  +    +  E + ++ ESG K +   Y+ ++  +
Sbjct: 497  KVMSEMLDAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFF 556

Query: 374  CRDLRPVEGLSLLQDMKKQGLDPKVDTYKSLISACGKQKLWEQAEDLFEGLK-------- 529
             R     +  +L Q+M + G  P    Y+ ++ A  ++ + +  E + +  K        
Sbjct: 557  LRFNEIKKAAALYQEMIEAGFTPDTGLYEVMLPALVRENMGDVIERVVQDTKELGSMNPH 616

Query: 530  -----------------------SKGVKLDRSMYHIMLKIYRNSGDLSKAEYLLVSMKEA 640
                                   S G +LDR ++  ++  Y +S   S+A  L+   +E 
Sbjct: 617  DISSVLVKGGCYDHGAKMLKVAISNGYELDREIFLSIMSSYSSSARYSEACELVEFFREH 676

Query: 641  GVEPTIATMHLLMVSYSSAGQPREAENVLRNLKTLGVDLSTLPYSSVIDAYLKNGDHKLG 820
              +        L++    AG+   A    R+   LG   S   Y S+I    K+    + 
Sbjct: 677  APDDIQMITEALIIILCKAGKLDAALEEYRSRGGLGTFRSCTMYESLIHECTKSEQFDIA 736

Query: 821  KEKLLEMKRDGLEPDHRIWTCFI 889
             +   +M+ +G+EP   ++   +
Sbjct: 737  SQLFSDMRFNGVEPSECLYQSMV 759



 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 63/307 (20%), Positives = 125/307 (40%), Gaps = 33/307 (10%)
 Frame = +2

Query: 41   LMLEAYARAGNIFEVKKIYHGMKAAGYLPTMHLYRCMIGLLSRAKRIRDVESMVAEMEET 220
            +ML+ + R   I +   +Y  M  AG+ P   LY  M+  L R      +E +V + +E 
Sbjct: 551  VMLDFFLRFNEIKKAAALYQEMIEAGFTPDTGLYEVMLPALVRENMGDVIERVVQDTKEL 610

Query: 221  G-LKP------------------------------DLSVFNSLLRMYTAIEDFKKTREVY 307
            G + P                              D  +F S++  Y++   + +  E+ 
Sbjct: 611  GSMNPHDISSVLVKGGCYDHGAKMLKVAISNGYELDREIFLSIMSSYSSSARYSEACELV 670

Query: 308  QQIVESGFKPNEDTYNTLILMYCRDLRPVEGLSLLQDMKKQGLDPKVDTYKSLISACGKQ 487
            +   E      +     LI++ C+  +    L   +     G       Y+SLI  C K 
Sbjct: 671  EFFREHAPDDIQMITEALIIILCKAGKLDAALEEYRSRGGLGTFRSCTMYESLIHECTKS 730

Query: 488  KLWEQAEDLFEGLKSKGVKLDRSMYHIMLKIYRNSGDLSKAEYLLVSMKEAGVEPTIATM 667
            + ++ A  LF  ++  GV+    +Y  M+ +Y   G    A++LL   ++  +     T+
Sbjct: 731  EQFDIASQLFSDMRFNGVEPSECLYQSMVSVYCRIGFPETAQHLLYHAEKNDIILDNVTV 790

Query: 668  HLLMV--SYSSAGQPREAENVLRNLKTLGVDLSTLPYSSVIDAYLKNGDHKLGKEKLLEM 841
            H++ +  +Y      + AE+++ NL+     +    ++++I AY  +G ++  +     M
Sbjct: 791  HIIDIIETYGKLKMWQSAESIVENLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTM 850

Query: 842  KRDGLEP 862
             R+G  P
Sbjct: 851  MREGPSP 857



 Score = 67.4 bits (163), Expect = 1e-08
 Identities = 57/276 (20%), Positives = 122/276 (44%), Gaps = 3/276 (1%)
 Frame = +2

Query: 44   MLEAYARAGNIFEVKKI-YHGMKAAGYLP--TMHLYRCMIGLLSRAKRIRDVESMVAEME 214
            M+  Y R G     + + YH  K    L   T+H+   +I    + K  +  ES+V  + 
Sbjct: 758  MVSVYCRIGFPETAQHLLYHAEKNDIILDNVTVHIID-IIETYGKLKMWQSAESIVENLR 816

Query: 215  ETGLKPDLSVFNSLLRMYTAIEDFKKTREVYQQIVESGFKPNEDTYNTLILMYCRDLRPV 394
            +   K D  V+N+L+  Y     +++ R ++  ++  G  P  ++ N L+     D R  
Sbjct: 817  QRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMREGPSPTVESVNGLLQALIVDGRLS 876

Query: 395  EGLSLLQDMKKQGLDPKVDTYKSLISACGKQKLWEQAEDLFEGLKSKGVKLDRSMYHIML 574
            E   ++Q+++   L     +   ++ A  +     + + ++ G+K+ G      +Y +M+
Sbjct: 877  ELYVVIQELQDMDLKISKSSILLMLEAFAQAGNLFEVQKVYNGMKAAGYFPTMHLYRLMI 936

Query: 575  KIYRNSGDLSKAEYLLVSMKEAGVEPTIATMHLLMVSYSSAGQPREAENVLRNLKTLGVD 754
             +      +     +L  M EAG +P +   + ++  YSS  + +    + + ++  G+ 
Sbjct: 937  GLLCRFKRVRDVRVMLSEMGEAGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLA 996

Query: 755  LSTLPYSSVIDAYLKNGDHKLGKEKLLEMKRDGLEP 862
                 Y+++I  Y ++   + G   + +MK  GLEP
Sbjct: 997  PDEETYNTLITMYCRDHRPEEGLSLMHKMKSLGLEP 1032


>ref|XP_002327945.1| predicted protein [Populus trichocarpa] gi|222837354|gb|EEE75733.1|
            predicted protein [Populus trichocarpa]
          Length = 1450

 Score =  791 bits (2043), Expect = 0.0
 Identities = 397/574 (69%), Positives = 463/574 (80%)
 Frame = +2

Query: 2    QDIDFKISKSTILLMLEAYARAGNIFEVKKIYHGMKAAGYLPTMHLYRCMIGLLSRAKRI 181
            QDI FKISKS+ILLML+A+ARAGNIFEVKKIYHGMKAAGY P+MHLYR M  LL R K++
Sbjct: 877  QDIGFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQV 936

Query: 182  RDVESMVAEMEETGLKPDLSVFNSLLRMYTAIEDFKKTREVYQQIVESGFKPNEDTYNTL 361
            RDVE+M++EMEE G KPDLS++NS+L+MY AI+DF+KT ++YQ+I E G +P+EDTYN L
Sbjct: 937  RDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNIL 996

Query: 362  ILMYCRDLRPVEGLSLLQDMKKQGLDPKVDTYKSLISACGKQKLWEQAEDLFEGLKSKGV 541
            I+MYCRD RP EGL L+ +M+  GL+PK+DTYKSL+++ GKQ+L EQAE+LFE L+S G 
Sbjct: 997  IVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGC 1056

Query: 542  KLDRSMYHIMLKIYRNSGDLSKAEYLLVSMKEAGVEPTIATMHLLMVSYSSAGQPREAEN 721
            KLDRS YHIM+KIYRNSG  SKA+ L   MK+ GVEPTIATMHLLMVSY S+GQP+EAE 
Sbjct: 1057 KLDRSFYHIMMKIYRNSGSHSKAQRLFSMMKDEGVEPTIATMHLLMVSYGSSGQPQEAEK 1116

Query: 722  VLRNLKTLGVDLSTLPYSSVIDAYLKNGDHKLGKEKLLEMKRDGLEPDHRIWTCFIRXXX 901
            VL NLK    +LSTLPYSSVIDAY++NGD+  G +KL ++K +GLEPDHRIWTCFIR   
Sbjct: 1117 VLSNLKETDANLSTLPYSSVIDAYVRNGDYNAGIQKLKQVKEEGLEPDHRIWTCFIRAAS 1176

Query: 902  XXXXXXXXXXXXXXXRDTGFDLPIRLLAERSESLVVEMDRLLMELGPLVDNAAFNFVNAI 1081
                           RDTGFDLPIRLL E+ E LV  +D  L  L  L DNAAFNFVNA+
Sbjct: 1177 LSQHTSEAILLLNALRDTGFDLPIRLLTEKPEPLVSALDLCLEMLETLGDNAAFNFVNAL 1236

Query: 1082 EDMLWAFELRATASWVFQLAIKRKVYRHDVFRVADKDWGADFRKLSPGAALVALTLWLDH 1261
            ED+LWAFELRATASWVF LAIKRK+YRHDVFRVADKDWGADFRKLS GAAL         
Sbjct: 1237 EDLLWAFELRATASWVFLLAIKRKIYRHDVFRVADKDWGADFRKLSGGAAL--------- 1287

Query: 1262 MQDASLQGSPESPKSIVLITGTAEYNMVSLDKTLKAYLWEMGSPFLPCKTRSGLLVAKGH 1441
              DASLQG PESPKS+ LITGTAEYNMVSLD TLKA LWEMGSPFLPCKTRSGLL+AK H
Sbjct: 1288 --DASLQGCPESPKSVALITGTAEYNMVSLDSTLKACLWEMGSPFLPCKTRSGLLIAKAH 1345

Query: 1442 SLRMWLKDSPFCFDLELKDGPSLPDLNSMQLSEGYFMRIGLIPVFKDIHERLGHVRPKKF 1621
            SL+MWLKDSPFC DLELK+ PSLP+ NSMQL EG F+R GL+P FK+I+E+LG VRPKKF
Sbjct: 1346 SLKMWLKDSPFCLDLELKNAPSLPESNSMQLIEGCFIRRGLVPAFKEINEKLGFVRPKKF 1405

Query: 1622 ARLALLTDEKRDKAIQADLEGRKEKLAKMKTTSA 1723
            A+ ALL+D++R+KAIQ  +EG KEK  KMK   A
Sbjct: 1406 AKFALLSDDRREKAIQVFIEGGKEKKEKMKKRGA 1439



 Score =  113 bits (282), Expect = 2e-22
 Identities = 76/283 (26%), Positives = 124/283 (43%)
 Frame = +2

Query: 44   MLEAYARAGNIFEVKKIYHGMKAAGYLPTMHLYRCMIGLLSRAKRIRDVESMVAEMEETG 223
            ++ A +RA N+ E   ++  M A    P +  Y  MI +  R       E +  ++E  G
Sbjct: 334  LISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRG 393

Query: 224  LKPDLSVFNSLLRMYTAIEDFKKTREVYQQIVESGFKPNEDTYNTLILMYCRDLRPVEGL 403
              PD   +NS L  +    + +K +++ +++V+ GF  +E TYNT+I MY +  +    L
Sbjct: 394  FFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQNDLAL 453

Query: 404  SLLQDMKKQGLDPKVDTYKSLISACGKQKLWEQAEDLFEGLKSKGVKLDRSMYHIMLKIY 583
             L +DMK  G +P V TY  LI + GK    E+A  +   + + GVK             
Sbjct: 454  QLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVK------------- 500

Query: 584  RNSGDLSKAEYLLVSMKEAGVEPTIATMHLLMVSYSSAGQPREAENVLRNLKTLGVDLST 763
                                  PT+ T   L+  Y+ AG+P EAE     +   G     
Sbjct: 501  ----------------------PTLRTYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQ 538

Query: 764  LPYSSVIDAYLKNGDHKLGKEKLLEMKRDGLEPDHRIWTCFIR 892
            L YS ++D +L+  + K       EM  DG+ P+H ++   +R
Sbjct: 539  LAYSVMLDIHLRFNEPKRAMTFYKEMIHDGIMPEHSLYELMLR 581



 Score =  107 bits (267), Expect = 1e-20
 Identities = 67/285 (23%), Positives = 139/285 (48%), Gaps = 5/285 (1%)
 Frame = +2

Query: 50   EAYARAGNIFEVKKIYHGMKAAGYLPTMHLYRCMIGLLSRAKRIRDVESMVAEM---EET 220
            E++ RA  ++E   + H      Y P   +   ++ +L +A +    E +  E+    E 
Sbjct: 200  ESWHRAFEVYEWLNLRHW-----YSPNARMLSTILAVLGKANQ----EPLAVEVFTRAEP 250

Query: 221  GLKPDLSVFNSLLRMYTAIEDFKKTREVYQQIVESGFKPNEDTYNTLI--LMYCRDLRPV 394
             ++  + V+N+++ +Y     F K +E++  + E G +P+  ++NTLI   +   ++ P 
Sbjct: 251  SVENTVKVYNAMMGVYARSGKFNKVQELFDLMRERGCEPDLVSFNTLINARLKAGEMTPN 310

Query: 395  EGLSLLQDMKKQGLDPKVDTYKSLISACGKQKLWEQAEDLFEGLKSKGVKLDRSMYHIML 574
              + LL ++++ GL P + TY +LISAC +    E+A ++F+ + +   + D   Y+ M+
Sbjct: 311  LAIELLTEVRRSGLRPDIITYNTLISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMI 370

Query: 575  KIYRNSGDLSKAEYLLVSMKEAGVEPTIATMHLLMVSYSSAGQPREAENVLRNLKTLGVD 754
             +Y   G   KAE L   ++  G  P   + +  + +++  G   + +++   +  +G  
Sbjct: 371  SVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFG 430

Query: 755  LSTLPYSSVIDAYLKNGDHKLGKEKLLEMKRDGLEPDHRIWTCFI 889
               + Y+++I  Y K G + L  +   +MK  G  PD   +T  I
Sbjct: 431  KDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLI 475



 Score =  102 bits (254), Expect = 4e-19
 Identities = 69/256 (26%), Positives = 123/256 (48%), Gaps = 2/256 (0%)
 Frame = +2

Query: 128  TMHLYRCMIGLLSRAKRIRDVESMVAEMEETGLKPDLSVFNSLL--RMYTAIEDFKKTRE 301
            T+ +Y  M+G+ +R+ +   V+ +   M E G +PDL  FN+L+  R+           E
Sbjct: 255  TVKVYNAMMGVYARSGKFNKVQELFDLMRERGCEPDLVSFNTLINARLKAGEMTPNLAIE 314

Query: 302  VYQQIVESGFKPNEDTYNTLILMYCRDLRPVEGLSLLQDMKKQGLDPKVDTYKSLISACG 481
            +  ++  SG +P+  TYNTLI    R     E +++  DM     +P + TY ++IS  G
Sbjct: 315  LLTEVRRSGLRPDIITYNTLISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYG 374

Query: 482  KQKLWEQAEDLFEGLKSKGVKLDRSMYHIMLKIYRNSGDLSKAEYLLVSMKEAGVEPTIA 661
            +  L  +AE LF  L+S+G   D   Y+  L  +   G++ K + +   M + G      
Sbjct: 375  RCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEM 434

Query: 662  TMHLLMVSYSSAGQPREAENVLRNLKTLGVDLSTLPYSSVIDAYLKNGDHKLGKEKLLEM 841
            T + ++  Y   GQ   A  + R++K+ G +   + Y+ +ID+  K    +     + EM
Sbjct: 435  TYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEM 494

Query: 842  KRDGLEPDHRIWTCFI 889
               G++P  R ++  I
Sbjct: 495  LNTGVKPTLRTYSALI 510



 Score = 77.8 bits (190), Expect = 9e-12
 Identities = 53/247 (21%), Positives = 115/247 (46%)
 Frame = +2

Query: 122  LPTMHLYRCMIGLLSRAKRIRDVESMVAEMEETGLKPDLSVFNSLLRMYTAIEDFKKTRE 301
            L  + +Y  +I    R K  +  ES+   M ++ +  +  V+N+L+  Y A   +++ R 
Sbjct: 777  LNNISVYVDVIEAYGRLKLWQKAESVAGNMRQSCITVNRKVWNALIEAYAASGCYERARA 836

Query: 302  VYQQIVESGFKPNEDTYNTLILMYCRDLRPVEGLSLLQDMKKQGLDPKVDTYKSLISACG 481
            V+  +++ G  P  D+ N L+     D R  E   ++Q+++  G      +   ++ A  
Sbjct: 837  VFNTMMKDGPSPTVDSINGLLQALIVDGRLEELYVVVQELQDIGFKISKSSILLMLDAFA 896

Query: 482  KQKLWEQAEDLFEGLKSKGVKLDRSMYHIMLKIYRNSGDLSKAEYLLVSMKEAGVEPTIA 661
            +     + + ++ G+K+ G      +Y +M ++      +   E +L  M+EAG +P ++
Sbjct: 897  RAGNIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLS 956

Query: 662  TMHLLMVSYSSAGQPREAENVLRNLKTLGVDLSTLPYSSVIDAYLKNGDHKLGKEKLLEM 841
              + ++  Y +    R+   + + +K  G++     Y+ +I  Y ++   K G   + EM
Sbjct: 957  IWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEM 1016

Query: 842  KRDGLEP 862
            +  GLEP
Sbjct: 1017 RTVGLEP 1023



 Score = 76.6 bits (187), Expect = 2e-11
 Identities = 65/281 (23%), Positives = 122/281 (43%), Gaps = 1/281 (0%)
 Frame = +2

Query: 50   EAYARAGNIFEVKKIYHGMKAAGYL-PTMHLYRCMIGLLSRAKRIRDVESMVAEMEETGL 226
            E +  A  +F   + + G+KA+  L  +M L  C +G    A  + D+     E + T L
Sbjct: 723  ELFTEASQVFSDMR-FCGIKASECLYQSMMLLYCKMGFPETAHHLIDL----TETDGTVL 777

Query: 227  KPDLSVFNSLLRMYTAIEDFKKTREVYQQIVESGFKPNEDTYNTLILMYCRDLRPVEGLS 406
              ++SV+  ++  Y  ++ ++K   V   + +S    N   +N LI  Y          +
Sbjct: 778  N-NISVYVDVIEAYGRLKLWQKAESVAGNMRQSCITVNRKVWNALIEAYAASGCYERARA 836

Query: 407  LLQDMKKQGLDPKVDTYKSLISACGKQKLWEQAEDLFEGLKSKGVKLDRSMYHIMLKIYR 586
            +   M K G  P VD+   L+ A       E+   + + L+  G K+ +S   +ML  + 
Sbjct: 837  VFNTMMKDGPSPTVDSINGLLQALIVDGRLEELYVVVQELQDIGFKISKSSILLMLDAFA 896

Query: 587  NSGDLSKAEYLLVSMKEAGVEPTIATMHLLMVSYSSAGQPREAENVLRNLKTLGVDLSTL 766
             +G++ + + +   MK AG  P++    ++        Q R+ E +L  ++  G      
Sbjct: 897  RAGNIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLS 956

Query: 767  PYSSVIDAYLKNGDHKLGKEKLLEMKRDGLEPDHRIWTCFI 889
             ++SV+  Y+   D +   +    +K DGLEPD   +   I
Sbjct: 957  IWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILI 997



 Score = 73.6 bits (179), Expect = 2e-10
 Identities = 55/278 (19%), Positives = 121/278 (43%)
 Frame = +2

Query: 44   MLEAYARAGNIFEVKKIYHGMKAAGYLPTMHLYRCMIGLLSRAKRIRDVESMVAEMEETG 223
            ++EAY R     + + +   M+ +       ++  +I   + +       ++   M + G
Sbjct: 786  VIEAYGRLKLWQKAESVAGNMRQSCITVNRKVWNALIEAYAASGCYERARAVFNTMMKDG 845

Query: 224  LKPDLSVFNSLLRMYTAIEDFKKTREVYQQIVESGFKPNEDTYNTLILMYCRDLRPVEGL 403
              P +   N LL+        ++   V Q++ + GFK ++ +   ++  + R     E  
Sbjct: 846  PSPTVDSINGLLQALIVDGRLEELYVVVQELQDIGFKISKSSILLMLDAFARAGNIFEVK 905

Query: 404  SLLQDMKKQGLDPKVDTYKSLISACGKQKLWEQAEDLFEGLKSKGVKLDRSMYHIMLKIY 583
             +   MK  G  P +  Y+ +     + K     E +   ++  G K D S+++ +LK+Y
Sbjct: 906  KIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMY 965

Query: 584  RNSGDLSKAEYLLVSMKEAGVEPTIATMHLLMVSYSSAGQPREAENVLRNLKTLGVDLST 763
                D  K   +   +KE G+EP   T ++L+V Y    +P+E   ++  ++T+G++   
Sbjct: 966  VAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGLEPKL 1025

Query: 764  LPYSSVIDAYLKNGDHKLGKEKLLEMKRDGLEPDHRIW 877
              Y S++ ++ K    +  +E   E++  G + D   +
Sbjct: 1026 DTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFY 1063



 Score = 64.3 bits (155), Expect = 1e-07
 Identities = 69/302 (22%), Positives = 122/302 (40%), Gaps = 37/302 (12%)
 Frame = +2

Query: 8    IDFKISKSTILLMLEAYARAGNIFEVKKIYHGMKAAGYLPTMHLYRCMIGLLSRAKRIRD 187
            I F   + T   M+  Y + G      ++Y  MK++G  P +  Y  +I  L +  +I +
Sbjct: 427  IGFGKDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEE 486

Query: 188  VESMVAEMEETGLKPDLSVFNSLLRMYT-------AIEDF-------------------- 286
               M++EM  TG+KP L  +++L+  Y        A E F                    
Sbjct: 487  AAGMMSEMLNTGVKPTLRTYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQLAYSVMLD 546

Query: 287  --------KKTREVYQQIVESGFKPNEDTYNTLILMYCRDLRPVEGLS-LLQDMKKQ-GL 436
                    K+    Y++++  G  P    Y  L+L    +   VE +  +++DM++  G+
Sbjct: 547  IHLRFNEPKRAMTFYKEMIHDGIMPEHSLYE-LMLRTLGNANKVEDIGRVVRDMEEVCGM 605

Query: 437  DPKVDTYKSLISACGKQKLWEQAEDLFEGLKSKGVKLDRSMYHIMLKIYRNSGDLSKAEY 616
            +P+  +Y  +   C     +++A  +     S   ++DR     +L  Y +SG  S A  
Sbjct: 606  NPQAISYILVKGDC-----YDEAAKMLRRAISDRYEIDRENLLSILSSYSSSGRHSVALD 660

Query: 617  LLVSMKEAGVEPTIATMHLLMVSYSSAGQPREAENVLRNLKTLGVDLSTLPYSSVIDAYL 796
            LL  +KE     +      L+V    A Q   A     N + LG   S   + ++I   L
Sbjct: 661  LLELLKEHTPRSSQMITEALVVMLCKAQQLDTALKEYSNSRELGFTGSFTMFEALIQCCL 720

Query: 797  KN 802
            +N
Sbjct: 721  EN 722