BLASTX nr result

ID: Coptis25_contig00020065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020065
         (722 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327847.1| predicted protein [Populus trichocarpa] gi|2...   365   4e-99
ref|XP_002280024.1| PREDICTED: isocitrate lyase-like [Vitis vini...   364   1e-98
sp|P15479.1|ACEA_RICCO RecName: Full=Isocitrate lyase; Short=ICL...   363   1e-98
ref|XP_002529741.1| isocitrate lyase, putative [Ricinus communis...   363   1e-98
ref|XP_002310458.1| predicted protein [Populus trichocarpa] gi|2...   363   2e-98

>ref|XP_002327847.1| predicted protein [Populus trichocarpa] gi|222837256|gb|EEE75635.1|
           predicted protein [Populus trichocarpa]
          Length = 576

 Score =  365 bits (938), Expect = 4e-99
 Identities = 176/218 (80%), Positives = 189/218 (86%)
 Frame = -2

Query: 655 QAWWNTERFRLAHRPYSARDVVSLRGNLKQGYGSNELAKKLWRTLKTHQANGTASRTFGA 476
           QAWWN+ERF+L  RPY+ARDVV+LRGNLKQGYGSNE+AKKLWRTLKTHQANGTASRTFG+
Sbjct: 26  QAWWNSERFKLTRRPYTARDVVALRGNLKQGYGSNEMAKKLWRTLKTHQANGTASRTFGS 85

Query: 475 LDPVQVTMMANHLDTVYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHD 296
           LDPVQV MMA HLD++YVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHD
Sbjct: 86  LDPVQVAMMAKHLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHD 145

Query: 295 RKQXXXXXXXXXXXXXRTPYIDYLKPIIXXXXXXXXXXXXTVKLCKLFVERGAAGVHIED 116
           RKQ             RTPY+DYLKPII            TVKLCKLFVERGAAGVHIED
Sbjct: 146 RKQREARMSMSREERARTPYVDYLKPIIADGDTGFGATTATVKLCKLFVERGAAGVHIED 205

Query: 115 QSSVTKKCGHMSGKVLVSVSEHINRLVAARLQFDIMGV 2
           QSSVTKKCGHM+GKVLV++SEHINRLVAARLQFD+MGV
Sbjct: 206 QSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGV 243


>ref|XP_002280024.1| PREDICTED: isocitrate lyase-like [Vitis vinifera]
          Length = 576

 Score =  364 bits (934), Expect = 1e-98
 Identities = 176/218 (80%), Positives = 188/218 (86%)
 Frame = -2

Query: 655 QAWWNTERFRLAHRPYSARDVVSLRGNLKQGYGSNELAKKLWRTLKTHQANGTASRTFGA 476
           QAWWN+ERF+L  RPYSARDVV+LRGNLKQ YGSNE+AKKLW+TLKTHQANGTASRTFGA
Sbjct: 26  QAWWNSERFKLTRRPYSARDVVALRGNLKQSYGSNEMAKKLWKTLKTHQANGTASRTFGA 85

Query: 475 LDPVQVTMMANHLDTVYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHD 296
           LDPVQV MMA HLDT+YVSGWQCSSTHT+TNEPGPDLADYPYDTVPNKVEHL+FAQQYHD
Sbjct: 86  LDPVQVAMMAKHLDTIYVSGWQCSSTHTTTNEPGPDLADYPYDTVPNKVEHLYFAQQYHD 145

Query: 295 RKQXXXXXXXXXXXXXRTPYIDYLKPIIXXXXXXXXXXXXTVKLCKLFVERGAAGVHIED 116
           RKQ             RTPY+DYLKPII            TVKLCKLFVERGAAGVHIED
Sbjct: 146 RKQKEARMSMSREERARTPYVDYLKPIIADGDTGFGGATATVKLCKLFVERGAAGVHIED 205

Query: 115 QSSVTKKCGHMSGKVLVSVSEHINRLVAARLQFDIMGV 2
           QSS+TKKCGHM+GKVLVSVSEHINRLVAARLQFD+MGV
Sbjct: 206 QSSMTKKCGHMAGKVLVSVSEHINRLVAARLQFDVMGV 243


>sp|P15479.1|ACEA_RICCO RecName: Full=Isocitrate lyase; Short=ICL; Short=Isocitrase;
           Short=Isocitratase gi|169707|gb|AAA53378.1| isocitrate
           lyase [Ricinus communis] gi|225861|prf||1401247A
           isocitrate lyase
          Length = 576

 Score =  363 bits (933), Expect = 1e-98
 Identities = 176/218 (80%), Positives = 188/218 (86%)
 Frame = -2

Query: 655 QAWWNTERFRLAHRPYSARDVVSLRGNLKQGYGSNELAKKLWRTLKTHQANGTASRTFGA 476
           QAWWN+ERF+L  RPY+ARDVV+LRGNLKQ Y SNELAKKLWRTLKTHQANGTASRTFGA
Sbjct: 26  QAWWNSERFKLTRRPYTARDVVALRGNLKQSYASNELAKKLWRTLKTHQANGTASRTFGA 85

Query: 475 LDPVQVTMMANHLDTVYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHD 296
           LDPVQVTMMA HLD++YVSGWQCSSTHT+TNEPGPDLADYPYDTVPNKVEHLFFAQQYHD
Sbjct: 86  LDPVQVTMMAKHLDSIYVSGWQCSSTHTTTNEPGPDLADYPYDTVPNKVEHLFFAQQYHD 145

Query: 295 RKQXXXXXXXXXXXXXRTPYIDYLKPIIXXXXXXXXXXXXTVKLCKLFVERGAAGVHIED 116
           RKQ             RTPY+DYLKPII            TVKLCKLFVERGAAGVHIED
Sbjct: 146 RKQREARMSMSREERARTPYVDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIED 205

Query: 115 QSSVTKKCGHMSGKVLVSVSEHINRLVAARLQFDIMGV 2
           QSSVTKKCGHM+GKVLV++SEHINRLVAARLQFD+MGV
Sbjct: 206 QSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGV 243


>ref|XP_002529741.1| isocitrate lyase, putative [Ricinus communis]
           gi|223530782|gb|EEF32648.1| isocitrate lyase, putative
           [Ricinus communis]
          Length = 576

 Score =  363 bits (933), Expect = 1e-98
 Identities = 176/218 (80%), Positives = 188/218 (86%)
 Frame = -2

Query: 655 QAWWNTERFRLAHRPYSARDVVSLRGNLKQGYGSNELAKKLWRTLKTHQANGTASRTFGA 476
           QAWWN+ERF+L  RPY+ARDVV+LRGNLKQ Y SNELAKKLWRTLKTHQANGTASRTFGA
Sbjct: 26  QAWWNSERFKLTRRPYTARDVVALRGNLKQSYASNELAKKLWRTLKTHQANGTASRTFGA 85

Query: 475 LDPVQVTMMANHLDTVYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHD 296
           LDPVQVTMMA HLD++YVSGWQCSSTHT+TNEPGPDLADYPYDTVPNKVEHLFFAQQYHD
Sbjct: 86  LDPVQVTMMAKHLDSIYVSGWQCSSTHTTTNEPGPDLADYPYDTVPNKVEHLFFAQQYHD 145

Query: 295 RKQXXXXXXXXXXXXXRTPYIDYLKPIIXXXXXXXXXXXXTVKLCKLFVERGAAGVHIED 116
           RKQ             RTPY+DYLKPII            TVKLCKLFVERGAAGVHIED
Sbjct: 146 RKQREARMSMSREERARTPYVDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIED 205

Query: 115 QSSVTKKCGHMSGKVLVSVSEHINRLVAARLQFDIMGV 2
           QSSVTKKCGHM+GKVLV++SEHINRLVAARLQFD+MGV
Sbjct: 206 QSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGV 243


>ref|XP_002310458.1| predicted protein [Populus trichocarpa] gi|222853361|gb|EEE90908.1|
           predicted protein [Populus trichocarpa]
          Length = 576

 Score =  363 bits (932), Expect = 2e-98
 Identities = 175/218 (80%), Positives = 188/218 (86%)
 Frame = -2

Query: 655 QAWWNTERFRLAHRPYSARDVVSLRGNLKQGYGSNELAKKLWRTLKTHQANGTASRTFGA 476
           QAWWN+ERF+L  RPYSARDVV+LRGNLKQ YGSN++AKKLWRTLKTHQANGTASRTFG+
Sbjct: 26  QAWWNSERFKLTRRPYSARDVVALRGNLKQSYGSNDMAKKLWRTLKTHQANGTASRTFGS 85

Query: 475 LDPVQVTMMANHLDTVYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHD 296
           LDPVQV MMA HLD++YVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHD
Sbjct: 86  LDPVQVAMMARHLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHD 145

Query: 295 RKQXXXXXXXXXXXXXRTPYIDYLKPIIXXXXXXXXXXXXTVKLCKLFVERGAAGVHIED 116
           RKQ             RTPY+DYLKPII            TVKLCKLFVERGAAGVHIED
Sbjct: 146 RKQREARMNMSREERARTPYVDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIED 205

Query: 115 QSSVTKKCGHMSGKVLVSVSEHINRLVAARLQFDIMGV 2
           QSSVTKKCGHM+GKVLV++SEHINRLVAARLQFD+MGV
Sbjct: 206 QSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGV 243


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