BLASTX nr result
ID: Coptis25_contig00020062
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00020062 (718 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK24693.1| unknown [Picea sitchensis] 256 4e-66 ref|XP_004147161.1| PREDICTED: heterogeneous nuclear ribonucleop... 240 2e-61 ref|XP_004173706.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneou... 240 2e-61 ref|XP_004151998.1| PREDICTED: DAZ-associated protein 1-like [Cu... 240 2e-61 ref|XP_002300356.1| predicted protein [Populus trichocarpa] gi|2... 240 2e-61 >gb|ABK24693.1| unknown [Picea sitchensis] Length = 476 Score = 256 bits (653), Expect = 4e-66 Identities = 133/229 (58%), Positives = 161/229 (70%) Frame = +3 Query: 30 MDSDQGKLFVGGISFETKEETLRDHFSKYGEVIDTVIMRDRVTSRPRGFGFVVFADPSVV 209 MDSD K+F+GGIS+ET EE LRD+FSKYGEV+ TVIM+DR+T R RGFGFVVF+DPS+V Sbjct: 1 MDSDHCKIFIGGISWETSEERLRDYFSKYGEVVQTVIMKDRLTGRARGFGFVVFSDPSIV 60 Query: 210 DQALEENHVICSRTVEVKKAVPRGEQHQHYHNSNQEQHSRGFGRKXXXXXXXXXTQFRSK 389 D AL+E H I R VE KKAVPR EQ NS S+G+G R+K Sbjct: 61 DIALQEKHTIDGRAVEAKKAVPRSEQQNTRTNSYNNNDSQGYG----------GGSVRTK 110 Query: 390 KIFVGGLSASVTEEEFRGYFEKFGRITDVVVMYDSTTHRPRGFGFITFDSEEAVESVMQN 569 KIFVGGL A++TEE+F+ YF++FG ITDVVVMYD T RPRGFGFI+FDSE+AVESV+Q Sbjct: 111 KIFVGGLPANLTEEDFKNYFQQFGNITDVVVMYDHNTQRPRGFGFISFDSEDAVESVLQK 170 Query: 570 NFHELNNKSVEVKRAVPKDAATNSGRNHANSHNMRNGEGRGSIIGRYSG 716 +FH+LN K VEVKRA+PKDA+ + A + N S G Y G Sbjct: 171 SFHQLNEKLVEVKRALPKDASPGAAGRGAGGYQGYNNS--TSNTGGYEG 217 >ref|XP_004147161.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Cucumis sativus] Length = 462 Score = 240 bits (613), Expect = 2e-61 Identities = 124/225 (55%), Positives = 154/225 (68%) Frame = +3 Query: 30 MDSDQGKLFVGGISFETKEETLRDHFSKYGEVIDTVIMRDRVTSRPRGFGFVVFADPSVV 209 MDSDQGKLF+GGIS+ET E+ L+D+FS YGEV+ TV+MRD++TSRPRGFGFVVF+DPSV+ Sbjct: 1 MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60 Query: 210 DQALEENHVICSRTVEVKKAVPRGEQHQHYHNSNQEQHSRGFGRKXXXXXXXXXTQFRSK 389 D+ L++ H I +TVE K+A+ R EQ SN + G R+K Sbjct: 61 DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNGRNSG---------GSGGGNMRTK 111 Query: 390 KIFVGGLSASVTEEEFRGYFEKFGRITDVVVMYDSTTHRPRGFGFITFDSEEAVESVMQN 569 KIFVGGL ++TEE F+ YFE +G +TDVVVMYD T RPRGFGFI+FD+EEAV+ V+ Sbjct: 112 KIFVGGLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHK 171 Query: 570 NFHELNNKSVEVKRAVPKDAATNSGRNHANSHNMRNGEGRGSIIG 704 FH+LN K VEVKRA+PKDA N G A M G G G G Sbjct: 172 TFHDLNGKQVEVKRALPKDA--NPG---AGGRTMSGGAGSGGYQG 211 >ref|XP_004173706.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein D-like [Cucumis sativus] Length = 462 Score = 240 bits (612), Expect = 2e-61 Identities = 124/225 (55%), Positives = 154/225 (68%) Frame = +3 Query: 30 MDSDQGKLFVGGISFETKEETLRDHFSKYGEVIDTVIMRDRVTSRPRGFGFVVFADPSVV 209 MDSDQGKLF+GGIS+ET E+ L+D+FS YGEV+ TV+MRD++TSRPRGFGFVVF+DPSV+ Sbjct: 1 MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60 Query: 210 DQALEENHVICSRTVEVKKAVPRGEQHQHYHNSNQEQHSRGFGRKXXXXXXXXXTQFRSK 389 D+ L++ H I +TVE K+A+ R EQ SN + G R+K Sbjct: 61 DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNGRNSG---------GSGGGNMRTK 111 Query: 390 KIFVGGLSASVTEEEFRGYFEKFGRITDVVVMYDSTTHRPRGFGFITFDSEEAVESVMQN 569 K FVGGL ++TEE F+ YFE +G +TDVVVMYD T RPRGFGFI+FD+EEAV+ V+ Sbjct: 112 KXFVGGLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHK 171 Query: 570 NFHELNNKSVEVKRAVPKDAATNSGRNHANSHNMRNGEGRGSIIG 704 FH+LN K VEVKRA+PKDA N G A S M G G G G Sbjct: 172 TFHDLNGKQVEVKRALPKDA--NPG---AGSRTMSGGAGSGGYQG 211 >ref|XP_004151998.1| PREDICTED: DAZ-associated protein 1-like [Cucumis sativus] gi|449509419|ref|XP_004163583.1| PREDICTED: DAZ-associated protein 1-like [Cucumis sativus] Length = 436 Score = 240 bits (612), Expect = 2e-61 Identities = 123/231 (53%), Positives = 159/231 (68%), Gaps = 2/231 (0%) Frame = +3 Query: 30 MDSDQGKLFVGGISFETKEETLRDHFSKYGEVIDTVIMRDRVTSRPRGFGFVVFADPSVV 209 MDSD+GKLF+GGI+++T EE LRD+FS++GEVI VIMRD+ T RPRGFGFVVF+DPS++ Sbjct: 1 MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL 60 Query: 210 DQALEENHVICSRTVEVKKAVPRGEQHQHYHN--SNQEQHSRGFGRKXXXXXXXXXTQFR 383 DQ L++ H I R VE K+A+ R EQ + +N + S G G FR Sbjct: 61 DQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSG------------YFR 108 Query: 384 SKKIFVGGLSASVTEEEFRGYFEKFGRITDVVVMYDSTTHRPRGFGFITFDSEEAVESVM 563 +KKIFVGGL +++TE+ FR YFE +G++TDVV+MYD T RPRGFGFITFD+E+AV+ V+ Sbjct: 109 TKKIFVGGLPSALTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVL 168 Query: 564 QNNFHELNNKSVEVKRAVPKDAATNSGRNHANSHNMRNGEGRGSIIGRYSG 716 +FHELN K VEVKRA+PKDA SG + +G S GR G Sbjct: 169 YKSFHELNGKLVEVKRALPKDANPGSGGRAGYQNYGASGTNSNSFDGRSDG 219 >ref|XP_002300356.1| predicted protein [Populus trichocarpa] gi|222847614|gb|EEE85161.1| predicted protein [Populus trichocarpa] Length = 478 Score = 240 bits (612), Expect = 2e-61 Identities = 123/213 (57%), Positives = 153/213 (71%) Frame = +3 Query: 30 MDSDQGKLFVGGISFETKEETLRDHFSKYGEVIDTVIMRDRVTSRPRGFGFVVFADPSVV 209 M+SD GKLF+GGIS++T EE L+++FSKYGEV++ VIMRDRVT R RGFGFVVFADP V Sbjct: 1 MESDLGKLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRVTGRARGFGFVVFADPIVA 60 Query: 210 DQALEENHVICSRTVEVKKAVPRGEQHQHYHNSNQEQHSRGFGRKXXXXXXXXXTQFRSK 389 ++ + E HV+ RTVE KKAVPR +QH N++ S G G R+K Sbjct: 61 ERVIMEKHVVDGRTVEAKKAVPRDDQHILSRNTSSIHGSPGPG--------------RTK 106 Query: 390 KIFVGGLSASVTEEEFRGYFEKFGRITDVVVMYDSTTHRPRGFGFITFDSEEAVESVMQN 569 KIFVGGL+++VTE +F+ YFE+FG ITDVVVMYD T RPRGFGFIT+DSEEAV+ V+ Sbjct: 107 KIFVGGLASTVTENDFKKYFEQFGIITDVVVMYDHNTLRPRGFGFITYDSEEAVDRVLHK 166 Query: 570 NFHELNNKSVEVKRAVPKDAATNSGRNHANSHN 668 FHELN K VEVKRAVPK+ + R+ +N Sbjct: 167 TFHELNGKMVEVKRAVPKELSPGPSRSPLMGYN 199