BLASTX nr result
ID: Coptis25_contig00020048
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00020048 (852 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g... 90 6e-16 ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2... 89 1e-15 ref|XP_002867770.1| hypothetical protein ARALYDRAFT_329378 [Arab... 88 2e-15 ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|2... 88 3e-15 ref|XP_003598443.1| F-box/kelch-repeat protein [Medicago truncat... 86 1e-14 >ref|XP_002308787.1| f-box family protein [Populus trichocarpa] gi|222854763|gb|EEE92310.1| f-box family protein [Populus trichocarpa] Length = 396 Score = 90.1 bits (222), Expect = 6e-16 Identities = 68/208 (32%), Positives = 95/208 (45%), Gaps = 19/208 (9%) Frame = -1 Query: 798 VLGSVNGLVCFALQSWRYTNYSSPFFICNPITRAYLRVPKSP--------KNHTPSLVNG 643 VLGSVNGL+C + N + NP TR + VP P V G Sbjct: 98 VLGSVNGLLCIS-------NVVDDIAVWNPSTRKHRVVPFLPIELKRYFGTKSCSVYVFG 150 Query: 642 FGYDSVNDECKVFRILENG----EKFEAEV--FALGSNSWRLIENLPNVFFFPSLVLRKL 481 FGYDSV D+ K+ RI + G FE+EV ++L SWR I ++P +P Sbjct: 151 FGYDSVRDDYKLVRIAQFGGGGKRSFESEVKVYSLRKQSWRRIGDMPYCVHYPGA----- 205 Query: 480 YNVFMNDSLHWLTQKNNDFKIXXXXXXXXXXXXF-----QIPRESKDAIRGFGVLGECLC 316 VF N +LHW+ +N + + Q + K+ GVL CLC Sbjct: 206 NGVFANGALHWVVGENPESNVANIVVALDLGVEDYREVLQPEYKDKNFYIDLGVLRGCLC 265 Query: 315 VIGGSDFHSDDLIVWVMKEYGVESSWAK 232 + ++F + + VW+MKEYGV+ SW K Sbjct: 266 FL--ANFLGERVDVWMMKEYGVKESWTK 291 >ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1| predicted protein [Populus trichocarpa] Length = 408 Score = 89.0 bits (219), Expect = 1e-15 Identities = 74/249 (29%), Positives = 110/249 (44%), Gaps = 30/249 (12%) Frame = -1 Query: 801 DVLGSVNGLVCFALQSWRYTNYSSPFFICNPITRAYLRVPKSP--------KNHTPSLVN 646 +V+GS NGL+ + Y NP TR +P SP + SL N Sbjct: 92 EVMGSCNGLLALLNSDFSIALY-------NPSTREKKMIPVSPLELPNDLDDSKVSSLFN 144 Query: 645 --GFGYDSVNDECKVFRIL----ENGEKF---EAEVFALGSNSWRLIENLPNV--FFFPS 499 GFG+D +N++ KV R + ++ + F E +V++L SNSW+ I++ P F P Sbjct: 145 FYGFGHDPINEDYKVVRFIHFYGDSPDGFFHCEVKVYSLKSNSWKRIDDYPYDLRFILPP 204 Query: 498 LV---LRKLYNVFMNDSLHWLT-------QKNNDFKIXXXXXXXXXXXXFQIPRESKDAI 349 R+ Y VF N ++HW + +D + Q S + Sbjct: 205 DYHPRCRRGYGVFANSAVHWKATVVGKGKENGSDLIVAFDLGAEEFKIIPQPDYSSNEHE 264 Query: 348 RGFGVLGECLCVIGGSDFHSDDLIVWVMKEYGVESSWAKEC-VINRRAVDSRWFGGLEVM 172 GVLG CLCV + + +WVMKEYGV+ SW C VI + V + W + Sbjct: 265 MNVGVLGGCLCVFCNKNCKQVE--IWVMKEYGVKESWTHLCTVIAQLQVKAFWLHARPLA 322 Query: 171 QAKNGELIL 145 +K G+ IL Sbjct: 323 YSKGGDKIL 331 >ref|XP_002867770.1| hypothetical protein ARALYDRAFT_329378 [Arabidopsis lyrata subsp. lyrata] gi|297313606|gb|EFH44029.1| hypothetical protein ARALYDRAFT_329378 [Arabidopsis lyrata subsp. lyrata] Length = 406 Score = 88.2 bits (217), Expect = 2e-15 Identities = 68/215 (31%), Positives = 99/215 (46%), Gaps = 25/215 (11%) Frame = -1 Query: 801 DVLGSVNGLVCFALQSWRYTNYSSPFFICNPITRAYLRVPKS----PKNHTPS--LVNGF 640 +V GS NGL+ + N + I NP TR R+P P+ T + GF Sbjct: 90 EVFGSCNGLIGLS-------NSPTDIAIFNPSTRQIHRLPAESVDFPEGSTTRGYVFYGF 142 Query: 639 GYDSVNDECKVFRILE----------NGEKFEAEVFALGSNSW-RLIENLPNV----FFF 505 GYDSVND+ KV R+++ G +E +VF+L NSW R+ +P + +F+ Sbjct: 143 GYDSVNDDYKVVRMVQCKGGKADELVFGFPYEIKVFSLKKNSWKRITRVIPAIQLLFYFY 202 Query: 504 PSLVLRKLYNVFMNDSLHWLTQKNNDF----KIXXXXXXXXXXXXFQIPRESKDAIRGFG 337 L+ R+ Y V ++SLHW+ + I P + G Sbjct: 203 YHLLYRRGYGVLASNSLHWVLPRRPGLIAFNAIIRFDLDTEEFGILDFPEDLAHENIDIG 262 Query: 336 VLGECLCVIGGSDFHSDDLIVWVMKEYGVESSWAK 232 VL CLC++ +F D VW+MKEY VE SW+K Sbjct: 263 VLDGCLCLMCNHEFSYVD--VWIMKEYKVEGSWSK 295 >ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|222860326|gb|EEE97873.1| predicted protein [Populus trichocarpa] Length = 410 Score = 87.8 bits (216), Expect = 3e-15 Identities = 65/242 (26%), Positives = 108/242 (44%), Gaps = 21/242 (8%) Frame = -1 Query: 807 YYDVLGSVNGLVCFALQSWRYTNYSSPFFICNPITRAYLRVPKSPKNHTP------SLVN 646 + +++GS NGL+C + N F++CNP+T ++R P + K V Sbjct: 124 HVELVGSCNGLLCLFDK-----NSKKVFYLCNPVTGEHVRTPANCKKEKQRGKTILDAVL 178 Query: 645 GFGYDSVNDECKVFRILENGEKF-------EAEVFALGSNSWRLIENLPNVFFFPSLVLR 487 GFG+ ++ V RI + E E+ G N W+ I +P FP + Sbjct: 179 GFGFSPKSNHYMVLRITRKKLTYPISILRSEGEICIFGDNEWKSIGEIP----FPDC--K 232 Query: 486 KLYNVFMNDSLHWLTQKNNDFKIXXXXXXXXXXXXFQIPRESKDAIRG------FGVLGE 325 K + V +N +LHW+ + D++ P + R GVL + Sbjct: 233 KFFGVSLNGALHWILNLD-DYEDADLICALDIDSKKIRPMSPPNGFRRDTTEMTLGVLRD 291 Query: 324 CLCVIGGSDFHSDDLIVWVMKEYGVESSWAKECVINRRAVDSRWFGGL--EVMQAKNGEL 151 CL + ++ D +WVMKEYGV+ SW KE VI + ++ S +M +K+GE+ Sbjct: 292 CLFICDSMTLYNLD--IWVMKEYGVKDSWTKEIVIAKTSLPSNLQNSFLQPIMVSKDGEV 349 Query: 150 IL 145 ++ Sbjct: 350 LI 351 >ref|XP_003598443.1| F-box/kelch-repeat protein [Medicago truncatula] gi|355487491|gb|AES68694.1| F-box/kelch-repeat protein [Medicago truncatula] Length = 392 Score = 85.9 bits (211), Expect = 1e-14 Identities = 64/214 (29%), Positives = 100/214 (46%), Gaps = 23/214 (10%) Frame = -1 Query: 804 YDVLGSVNGLVCFALQSWRYTNYSSPFFICNPITRAYLRVPKSPKNHTPSLVN-GFGYDS 628 Y ++GS NG+VC A N++ + NP T+ ++P K++ P+L+ GFGYDS Sbjct: 130 YFIIGSCNGIVCIA------DNHNGLVILWNPSTKKIKQLPLYEKSNGPTLMTFGFGYDS 183 Query: 627 VNDECKV-----FRILENGEKF----EAEVFALGSNSWRLIENLPNVFFFPSLVLRKLYN 475 +ND KV + +L+ +F + +V LG+N WR I++ P F L + + Sbjct: 184 LNDNYKVVVVLAYLVLDEDYRFFNKNKVKVHTLGTNIWRTIQDYP----FGGLPVPVMKG 239 Query: 474 VFMNDSLHWLTQKNNDFKIXXXXXXXXXXXXFQIPRESKDAIR-------------GFGV 334 F++ +++WL + + F + +ES I V Sbjct: 240 EFVSGTINWLLSEESS-------ECPRFIVSFDLAKESYQKISPPNLGGVDVCDMSALSV 292 Query: 333 LGECLCVIGGSDFHSDDLIVWVMKEYGVESSWAK 232 L +CLCV G D VWVMKEYG + SW K Sbjct: 293 LRDCLCVTSGVD-------VWVMKEYGNKESWTK 319