BLASTX nr result

ID: Coptis25_contig00020038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020038
         (787 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330340.1| predicted protein [Populus trichocarpa] gi|1...   196   6e-48
ref|XP_004172377.1| PREDICTED: uncharacterized protein LOC101223...   187   2e-45
ref|XP_002516903.1| conserved hypothetical protein [Ricinus comm...   186   4e-45
ref|NP_001237555.1| uncharacterized protein LOC100527797 [Glycin...   186   6e-45
ref|XP_002272645.1| PREDICTED: uncharacterized protein LOC100252...   185   1e-44

>ref|XP_002330340.1| predicted protein [Populus trichocarpa] gi|118483035|gb|ABK93428.1|
           unknown [Populus trichocarpa]
           gi|222871544|gb|EEF08675.1| predicted protein [Populus
           trichocarpa]
          Length = 187

 Score =  196 bits (497), Expect = 6e-48
 Identities = 97/161 (60%), Positives = 122/161 (75%), Gaps = 10/161 (6%)
 Frame = -2

Query: 786 PAPKVVDIKPVVTKAAAVD----------NLAKEDISRINPDNVLEDRDPGYDAMLNHMV 637
           P  +V D +P VT    V+          +   +   RINPDNVLE+RD  YDAML+ MV
Sbjct: 19  PPSRVTDRRPPVTSTEKVEISSTTTTNQNSPGSDGAPRINPDNVLEERDTQYDAMLSQMV 78

Query: 636 GRIKTKPGGKLEMGEAFVVEKYDRPMPKLRNTKPESNYYEGQPAPPGTLNVAQLRQMLLL 457
           GRIK+KPGGKLE GEA VVE+YDRPMPKLRNTKP+S  YE +   PGTLNVAQLR ++L+
Sbjct: 79  GRIKSKPGGKLETGEAPVVERYDRPMPKLRNTKPDSGRYEERAVAPGTLNVAQLRHIILM 138

Query: 456 HQGKAKDHDGPMDVQQIAERFQIDMLQVQKILQFVSLPPED 334
           +QGKA DH+GPM++QQIAE+F++++ QVQ+ILQF+SLPPED
Sbjct: 139 YQGKADDHEGPMNIQQIAEKFRLEVAQVQRILQFLSLPPED 179


>ref|XP_004172377.1| PREDICTED: uncharacterized protein LOC101223829 isoform 1 [Cucumis
           sativus] gi|449530796|ref|XP_004172378.1| PREDICTED:
           uncharacterized protein LOC101223829 isoform 2 [Cucumis
           sativus]
          Length = 189

 Score =  187 bits (475), Expect = 2e-45
 Identities = 93/150 (62%), Positives = 115/150 (76%), Gaps = 3/150 (2%)
 Frame = -2

Query: 774 VVDIKP---VVTKAAAVDNLAKEDISRINPDNVLEDRDPGYDAMLNHMVGRIKTKPGGKL 604
           +VD KP   V  KA     L   D+   +  N+LE+RDP +DAML+ MVGRIK+KPGGKL
Sbjct: 31  IVDRKPPPRVAEKARESGALDSGDVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKL 90

Query: 603 EMGEAFVVEKYDRPMPKLRNTKPESNYYEGQPAPPGTLNVAQLRQMLLLHQGKAKDHDGP 424
           EMGEA VVE+Y RPMPKLR+T   S+ YE +PAPPGTLNVAQ+RQ++LLH+GKA DHDGP
Sbjct: 91  EMGEASVVERYGRPMPKLRDTNISSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGP 150

Query: 423 MDVQQIAERFQIDMLQVQKILQFVSLPPED 334
           M + QIAER+ + + Q+Q ILQF+SLPPED
Sbjct: 151 MGLHQIAERYNVSVAQIQTILQFLSLPPED 180


>ref|XP_002516903.1| conserved hypothetical protein [Ricinus communis]
           gi|223543991|gb|EEF45517.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 190

 Score =  186 bits (473), Expect = 4e-45
 Identities = 90/133 (67%), Positives = 112/133 (84%)
 Frame = -2

Query: 732 DNLAKEDISRINPDNVLEDRDPGYDAMLNHMVGRIKTKPGGKLEMGEAFVVEKYDRPMPK 553
           DNL  +  SR+N DNVLE+RDP +DAML+ MVGRIKTKPGGK EM EA VVE+Y+RPMPK
Sbjct: 50  DNLDSDGGSRVNVDNVLEERDPQFDAMLSQMVGRIKTKPGGKDEMAEAAVVERYNRPMPK 109

Query: 552 LRNTKPESNYYEGQPAPPGTLNVAQLRQMLLLHQGKAKDHDGPMDVQQIAERFQIDMLQV 373
           LRNT  +S  YE +PAPPGTLNVAQLRQ++LLHQGKA   + P+D+ QIAE+F++++ QV
Sbjct: 110 LRNTTLDSARYEERPAPPGTLNVAQLRQIMLLHQGKADGQNAPIDIHQIAEKFRLEVAQV 169

Query: 372 QKILQFVSLPPED 334
           Q+IL+FVSLPPE+
Sbjct: 170 QQILEFVSLPPEE 182


>ref|NP_001237555.1| uncharacterized protein LOC100527797 [Glycine max]
           gi|255633234|gb|ACU16973.1| unknown [Glycine max]
          Length = 195

 Score =  186 bits (471), Expect = 6e-45
 Identities = 90/151 (59%), Positives = 115/151 (76%)
 Frame = -2

Query: 786 PAPKVVDIKPVVTKAAAVDNLAKEDISRINPDNVLEDRDPGYDAMLNHMVGRIKTKPGGK 607
           P     D    + KAA  D L  +D  R+N DN+LE+RDP +DAML  MVGRI +KPGGK
Sbjct: 35  PPNAAADKAAQIPKAAEQDVLHTDDRPRVNTDNILEERDPKFDAMLGQMVGRITSKPGGK 94

Query: 606 LEMGEAFVVEKYDRPMPKLRNTKPESNYYEGQPAPPGTLNVAQLRQMLLLHQGKAKDHDG 427
            EMGEAFVVEK++RPMPKLRNTKP+    E +P P GTLNVAQLR ++LLH+GKA D++G
Sbjct: 95  PEMGEAFVVEKFNRPMPKLRNTKPDFGRNEERPVPAGTLNVAQLRHIILLHEGKADDYNG 154

Query: 426 PMDVQQIAERFQIDMLQVQKILQFVSLPPED 334
            MD  QIAE+F+++++Q+Q ILQF+SLPPE+
Sbjct: 155 RMDAHQIAEKFRVNVVQIQTILQFLSLPPEN 185


>ref|XP_002272645.1| PREDICTED: uncharacterized protein LOC100252927 [Vitis vinifera]
           gi|297736864|emb|CBI26065.3| unnamed protein product
           [Vitis vinifera]
          Length = 192

 Score =  185 bits (469), Expect = 1e-44
 Identities = 89/130 (68%), Positives = 106/130 (81%)
 Frame = -2

Query: 723 AKEDISRINPDNVLEDRDPGYDAMLNHMVGRIKTKPGGKLEMGEAFVVEKYDRPMPKLRN 544
           + E   R N +N LE+RDP YDAML+ MVGRI++K GG+LEMGEA V  +Y+RPMPKLRN
Sbjct: 54  SSEGAPRFNSENFLEERDPQYDAMLSQMVGRIRSKSGGRLEMGEALVGGRYNRPMPKLRN 113

Query: 543 TKPESNYYEGQPAPPGTLNVAQLRQMLLLHQGKAKDHDGPMDVQQIAERFQIDMLQVQKI 364
           TKPES  YE +PAP GTLN AQLR +LLLHQGKA DHDGPM+V+QIAE+F+ID   V+ I
Sbjct: 114 TKPESGRYEEKPAPSGTLNAAQLRHILLLHQGKADDHDGPMNVKQIAEKFRIDATMVKSI 173

Query: 363 LQFVSLPPED 334
           LQF+SLPPED
Sbjct: 174 LQFLSLPPED 183


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