BLASTX nr result

ID: Coptis25_contig00020031 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020031
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64494.1| hypothetical protein VITISV_018031 [Vitis vinifera]    56   5e-06

>emb|CAN64494.1| hypothetical protein VITISV_018031 [Vitis vinifera]
          Length = 1295

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
 Frame = +3

Query: 3    RMVELQNQPISEGSNPLTEEEIFDKVLGVKPGYKRGLGHGEAPPSRKYVAGYE-HPDMD- 176
            +M+ELQ QP+ EG   L E EI  +VLG + GY +GLGHG  PPS    + ++ H +++ 
Sbjct: 1176 KMLELQKQPVPEGGQALKEAEICVQVLGSRSGYIKGLGHGPRPPSSSSKSTHKSHREIEL 1235

Query: 177  --QLRARAEETESQ 212
              +L+A  E  +SQ
Sbjct: 1236 ENELKATRELLQSQ 1249


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