BLASTX nr result

ID: Coptis25_contig00020030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020030
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80815.1| hypothetical protein VITISV_020466 [Vitis vinifera]   283   2e-74
emb|CBI17383.3| unnamed protein product [Vitis vinifera]              281   8e-74
ref|XP_002268446.1| PREDICTED: uncharacterized protein LOC100250...   281   8e-74
ref|XP_002327758.1| predicted protein [Populus trichocarpa] gi|2...   277   8e-73
ref|XP_002530736.1| conserved hypothetical protein [Ricinus comm...   275   5e-72

>emb|CAN80815.1| hypothetical protein VITISV_020466 [Vitis vinifera]
          Length = 849

 Score =  283 bits (723), Expect = 2e-74
 Identities = 132/172 (76%), Positives = 149/172 (86%)
 Frame = +2

Query: 2    DEHVDPIPPLFKVIIRRLVGWHILPPTCVPDSCIVNIYDEGDCIPPHIDHHDFVRPFCTV 181
            +E VDPIPPLFKVIIRRLV WH+LPP+CVPDSCIVNIY+EGDCIPPHID+HDFVRPFCTV
Sbjct: 638  NEVVDPIPPLFKVIIRRLVRWHVLPPSCVPDSCIVNIYEEGDCIPPHIDNHDFVRPFCTV 697

Query: 182  SFLSECNIVFGTTLKPVGPGDFGGSAAIPLPVGSVLVLKGNGADVAKHCVPAVPTRRISI 361
            SFLSEC+IVFGT LK +G G+F G  AIPLPVGSVLVL GNGADVAKHCVPAVP++RISI
Sbjct: 698  SFLSECBIVFGTNLKXLGAGEFVGPFAIPLPVGSVLVLNGNGADVAKHCVPAVPSKRISI 757

Query: 362  TFRKMAESKCPHGFVPEPDLQGLQPLPYDVDESNVMNPPKSPPLMNRHPVRQ 517
            TFRKM ESK P G++PEPDLQGLQP+ Y++D S + NP K    MNR  VR+
Sbjct: 758  TFRKMDESKRPIGYLPEPDLQGLQPVSYEMDRSKISNPQKPERRMNRQAVRR 809


>emb|CBI17383.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score =  281 bits (718), Expect = 8e-74
 Identities = 132/172 (76%), Positives = 149/172 (86%)
 Frame = +2

Query: 2   DEHVDPIPPLFKVIIRRLVGWHILPPTCVPDSCIVNIYDEGDCIPPHIDHHDFVRPFCTV 181
           +E VDPIPPLFKVIIRRLV WH+LPP+CVPDSCIVNIY+EGDCIPPHID+HDFVRPFCTV
Sbjct: 336 NEVVDPIPPLFKVIIRRLVRWHVLPPSCVPDSCIVNIYEEGDCIPPHIDNHDFVRPFCTV 395

Query: 182 SFLSECNIVFGTTLKPVGPGDFGGSAAIPLPVGSVLVLKGNGADVAKHCVPAVPTRRISI 361
           SFLSEC+IVFGT LK +G G+F G  AIPLPVGSVLVL GNGADVAKHCVPAVP++RISI
Sbjct: 396 SFLSECDIVFGTNLKILGAGEFVGPFAIPLPVGSVLVLNGNGADVAKHCVPAVPSKRISI 455

Query: 362 TFRKMAESKCPHGFVPEPDLQGLQPLPYDVDESNVMNPPKSPPLMNRHPVRQ 517
           TFRKM ESK P G++PEPDLQGLQP+ Y++D S + NP K    MNR  VR+
Sbjct: 456 TFRKMDESKRPIGYLPEPDLQGLQPVSYEMDRSKISNPQKPERRMNRQAVRR 507


>ref|XP_002268446.1| PREDICTED: uncharacterized protein LOC100250563 [Vitis vinifera]
          Length = 510

 Score =  281 bits (718), Expect = 8e-74
 Identities = 132/172 (76%), Positives = 149/172 (86%)
 Frame = +2

Query: 2   DEHVDPIPPLFKVIIRRLVGWHILPPTCVPDSCIVNIYDEGDCIPPHIDHHDFVRPFCTV 181
           +E VDPIPPLFKVIIRRLV WH+LPP+CVPDSCIVNIY+EGDCIPPHID+HDFVRPFCTV
Sbjct: 299 NEVVDPIPPLFKVIIRRLVRWHVLPPSCVPDSCIVNIYEEGDCIPPHIDNHDFVRPFCTV 358

Query: 182 SFLSECNIVFGTTLKPVGPGDFGGSAAIPLPVGSVLVLKGNGADVAKHCVPAVPTRRISI 361
           SFLSEC+IVFGT LK +G G+F G  AIPLPVGSVLVL GNGADVAKHCVPAVP++RISI
Sbjct: 359 SFLSECDIVFGTNLKILGAGEFVGPFAIPLPVGSVLVLNGNGADVAKHCVPAVPSKRISI 418

Query: 362 TFRKMAESKCPHGFVPEPDLQGLQPLPYDVDESNVMNPPKSPPLMNRHPVRQ 517
           TFRKM ESK P G++PEPDLQGLQP+ Y++D S + NP K    MNR  VR+
Sbjct: 419 TFRKMDESKRPIGYLPEPDLQGLQPVSYEMDRSKISNPQKPERRMNRQAVRR 470


>ref|XP_002327758.1| predicted protein [Populus trichocarpa] gi|222836843|gb|EEE75236.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  277 bits (709), Expect = 8e-73
 Identities = 128/166 (77%), Positives = 144/166 (86%)
 Frame = +2

Query: 11  VDPIPPLFKVIIRRLVGWHILPPTCVPDSCIVNIYDEGDCIPPHIDHHDFVRPFCTVSFL 190
           VDPIP LFKVIIRRLV WH++PPTCVPDSCIVNIY+E DCIPPHID HDFVRPFCTVSFL
Sbjct: 2   VDPIPDLFKVIIRRLVQWHVIPPTCVPDSCIVNIYEEWDCIPPHIDSHDFVRPFCTVSFL 61

Query: 191 SECNIVFGTTLKPVGPGDFGGSAAIPLPVGSVLVLKGNGADVAKHCVPAVPTRRISITFR 370
           S+CNI+FG+ LK VG GDF G  AIPLPVGSVLVL GNGADVAKHCVP+VPT+RISITFR
Sbjct: 62  SQCNILFGSNLKVVGAGDFDGPIAIPLPVGSVLVLNGNGADVAKHCVPSVPTKRISITFR 121

Query: 371 KMAESKCPHGFVPEPDLQGLQPLPYDVDESNVMNPPKSPPLMNRHP 508
           KM E+K P GFVPEPDLQG+QPL Y++D++  +N PKS P + R P
Sbjct: 122 KMDEAKRPIGFVPEPDLQGIQPLSYELDKTRKLNSPKSEPYVKRRP 167


>ref|XP_002530736.1| conserved hypothetical protein [Ricinus communis]
           gi|223529700|gb|EEF31642.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 511

 Score =  275 bits (702), Expect = 5e-72
 Identities = 127/168 (75%), Positives = 145/168 (86%)
 Frame = +2

Query: 5   EHVDPIPPLFKVIIRRLVGWHILPPTCVPDSCIVNIYDEGDCIPPHIDHHDFVRPFCTVS 184
           E VDPIP LFKVIIRRL+ WH+LPPTCVPDSCIVNIYDEGDCIPPHID+HDF RPFCTVS
Sbjct: 306 ETVDPIPHLFKVIIRRLIKWHVLPPTCVPDSCIVNIYDEGDCIPPHIDNHDFNRPFCTVS 365

Query: 185 FLSECNIVFGTTLKPVGPGDFGGSAAIPLPVGSVLVLKGNGADVAKHCVPAVPTRRISIT 364
           F+SECNIVFG+ LK +GPG+F GS AIPLPVGSVLVL GN ADV+KHCVP+VPT+RISIT
Sbjct: 366 FVSECNIVFGSNLKVLGPGEFSGSIAIPLPVGSVLVLDGNAADVSKHCVPSVPTKRISIT 425

Query: 365 FRKMAESKCPHGFVPEPDLQGLQPLPYDVDESNVMNPPKSPPLMNRHP 508
           FRKM E+K P GFVPEPDLQG++PL  D+D++  +N P+S P   R P
Sbjct: 426 FRKMDEAKRPAGFVPEPDLQGIEPLVDDLDKTKRLNSPRSEPHRRRQP 473


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