BLASTX nr result

ID: Coptis25_contig00020026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020026
         (203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68939.1| hypothetical protein VITISV_028994 [Vitis vinifera]    67   2e-09
ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002269809.1| PREDICTED: uncharacterized protein LOC100257...    64   1e-08
ref|XP_002511212.1| conserved hypothetical protein [Ricinus comm...    63   2e-08
ref|XP_002276370.1| PREDICTED: uncharacterized protein LOC100245...    63   3e-08

>emb|CAN68939.1| hypothetical protein VITISV_028994 [Vitis vinifera]
          Length = 1575

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 31/65 (47%), Positives = 44/65 (67%)
 Frame = +1

Query: 7    IRNQPMCITISEEKLRIGLDFFMNGKNWEAERLAKYPNVLSLSLYKRIIPRLNVIEFLIS 186
            ++  PMC+ +SE+K+  GLDF MN   W+ E +A+ P VL  SL KR+IPR +V + L S
Sbjct: 1093 LKTHPMCLILSEKKIMDGLDFLMNKMGWQREAVARVPLVLCYSLNKRVIPRCSVXQVLQS 1152

Query: 187  KSLLE 201
            K LL+
Sbjct: 1153 KGLLK 1157



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/65 (44%), Positives = 44/65 (67%)
 Frame = +1

Query: 7    IRNQPMCITISEEKLRIGLDFFMNGKNWEAERLAKYPNVLSLSLYKRIIPRLNVIEFLIS 186
            ++  PMC+ +SE+K+  GLDF MN   W+ + +A+ P VL  SL KR+IPR  V++ L S
Sbjct: 1456 LKTHPMCLMLSEKKIMDGLDFLMNKMGWQRKAVARVPLVLCYSLNKRVIPRCAVVQVLQS 1515

Query: 187  KSLLE 201
            + LL+
Sbjct: 1516 EGLLK 1520


>ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|222861800|gb|EEE99342.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/66 (46%), Positives = 43/66 (65%)
 Frame = +1

Query: 4   AIRNQPMCITISEEKLRIGLDFFMNGKNWEAERLAKYPNVLSLSLYKRIIPRLNVIEFLI 183
           A R  P C+ +SE+K+  GLDFF+N   W ++ +   P +L LSL KRIIPR  VI+ L 
Sbjct: 291 AFRKHPHCMMLSEKKIMKGLDFFVNKMGWPSKEIVHCPVILFLSLEKRIIPRCKVIQVLW 350

Query: 184 SKSLLE 201
           SK L++
Sbjct: 351 SKGLIK 356


>ref|XP_002269809.1| PREDICTED: uncharacterized protein LOC100257975 [Vitis vinifera]
          Length = 401

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/65 (44%), Positives = 44/65 (67%)
 Frame = +1

Query: 7   IRNQPMCITISEEKLRIGLDFFMNGKNWEAERLAKYPNVLSLSLYKRIIPRLNVIEFLIS 186
           ++  PMC+ +SE+K+  GLDF MN   W+ + +A+ P VL  SL KR+IPR  V++ L S
Sbjct: 282 LKTHPMCLMLSEKKIMDGLDFLMNKMGWQRKAVARVPLVLCYSLNKRVIPRCAVVQVLQS 341

Query: 187 KSLLE 201
           + LL+
Sbjct: 342 EGLLK 346


>ref|XP_002511212.1| conserved hypothetical protein [Ricinus communis]
           gi|223550327|gb|EEF51814.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 423

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/66 (46%), Positives = 46/66 (69%)
 Frame = +1

Query: 1   LAIRNQPMCITISEEKLRIGLDFFMNGKNWEAERLAKYPNVLSLSLYKRIIPRLNVIEFL 180
           LA + QPMC+  SE+K+R  +DFF+N  N     ++K PN++ LSL KRI+PR +V+  L
Sbjct: 307 LAFKLQPMCMLSSEKKIRKLMDFFVNKLNISPSVISKNPNLMLLSLEKRILPRCSVLNIL 366

Query: 181 ISKSLL 198
           +SK L+
Sbjct: 367 MSKELI 372


>ref|XP_002276370.1| PREDICTED: uncharacterized protein LOC100245862 [Vitis vinifera]
          Length = 403

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/66 (45%), Positives = 45/66 (68%)
 Frame = +1

Query: 1   LAIRNQPMCITISEEKLRIGLDFFMNGKNWEAERLAKYPNVLSLSLYKRIIPRLNVIEFL 180
           LA    P  + +SE+KL   +DF++N   WE+  +A+ P +LSLSL KRIIPR +V++ L
Sbjct: 275 LAFLKLPWSMVLSEDKLMATMDFYVNKMGWESSFIARRPVLLSLSLEKRIIPRYSVVQVL 334

Query: 181 ISKSLL 198
           +SK L+
Sbjct: 335 LSKGLI 340


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