BLASTX nr result

ID: Coptis25_contig00020018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020018
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271557.1| PREDICTED: uncharacterized protein LOC100253...   283   2e-74
ref|XP_002298911.1| predicted protein [Populus trichocarpa] gi|2...   280   1e-73
emb|CBI31251.3| unnamed protein product [Vitis vinifera]              273   1e-71
ref|XP_002525512.1| conserved hypothetical protein [Ricinus comm...   261   4e-68
ref|XP_004138826.1| PREDICTED: uncharacterized protein LOC101220...   256   1e-66

>ref|XP_002271557.1| PREDICTED: uncharacterized protein LOC100253283 [Vitis vinifera]
          Length = 248

 Score =  283 bits (723), Expect = 2e-74
 Identities = 132/170 (77%), Positives = 151/170 (88%)
 Frame = +2

Query: 65  GGVCMMRSNWRDEQHPSFIHFICSFLRENSFRLNIVPISPDFIFNCGGLSVAFVFVTNWD 244
           GGVCMMR+ WRDEQHPSFI+FI SFL+ NSFRLN VPI+PDFIFNCGGLSVAFVFVTNWD
Sbjct: 25  GGVCMMRNTWRDEQHPSFINFISSFLKANSFRLNFVPIAPDFIFNCGGLSVAFVFVTNWD 84

Query: 245 SDSMSSIFSRVQNLKGQFGNLYVIITLPTTEQNDSFVRSYFKYGMEIGRPTFVPVQDLEM 424
            ++    FSRV+ LK QF +LY+++TLPT EQNDSFV SYFK GME+GRPTFVPVQD+EM
Sbjct: 85  CNNYLPTFSRVKKLKEQFAHLYIVVTLPTREQNDSFVHSYFKLGMELGRPTFVPVQDMEM 144

Query: 425 GFEKIVKIAHARGVCKRQDALSKLKVEREQSVERMDAFLRVVTSIPGIDN 574
           GFEKIVKIAHARGVCKRQD +SKL+ ER++SV+ MD FLRV+TSIPGIDN
Sbjct: 145 GFEKIVKIAHARGVCKRQDVISKLRAERKKSVQGMDVFLRVITSIPGIDN 194


>ref|XP_002298911.1| predicted protein [Populus trichocarpa] gi|222846169|gb|EEE83716.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score =  280 bits (716), Expect = 1e-73
 Identities = 133/169 (78%), Positives = 147/169 (86%)
 Frame = +2

Query: 68  GVCMMRSNWRDEQHPSFIHFICSFLRENSFRLNIVPISPDFIFNCGGLSVAFVFVTNWDS 247
           GVCMM + WRDEQHPSFI+FI SFL  NSFRLN VPI+PD IFNCGGLSVAF+FVTNWD 
Sbjct: 19  GVCMMNTKWRDEQHPSFINFIASFLSANSFRLNFVPIAPDCIFNCGGLSVAFIFVTNWDC 78

Query: 248 DSMSSIFSRVQNLKGQFGNLYVIITLPTTEQNDSFVRSYFKYGMEIGRPTFVPVQDLEMG 427
            +   IFSRV+ LKGQF NLYV+++LP  EQNDSFV SYFKYGME+G+PTFVPVQDLEMG
Sbjct: 79  QNCEPIFSRVKKLKGQFANLYVVVSLPIKEQNDSFVHSYFKYGMELGKPTFVPVQDLEMG 138

Query: 428 FEKIVKIAHARGVCKRQDALSKLKVEREQSVERMDAFLRVVTSIPGIDN 574
           FEKIVKIAH+RG CKRQDALSKLK ER+QSV+ M  FLRVVTSIPGIDN
Sbjct: 139 FEKIVKIAHSRGTCKRQDALSKLKAERKQSVQGMGNFLRVVTSIPGIDN 187


>emb|CBI31251.3| unnamed protein product [Vitis vinifera]
          Length = 220

 Score =  273 bits (698), Expect = 1e-71
 Identities = 128/166 (77%), Positives = 147/166 (88%)
 Frame = +2

Query: 77  MMRSNWRDEQHPSFIHFICSFLRENSFRLNIVPISPDFIFNCGGLSVAFVFVTNWDSDSM 256
           MMR+ WRDEQHPSFI+FI SFL+ NSFRLN VPI+PDFIFNCGGLSVAFVFVTNWD ++ 
Sbjct: 1   MMRNTWRDEQHPSFINFISSFLKANSFRLNFVPIAPDFIFNCGGLSVAFVFVTNWDCNNY 60

Query: 257 SSIFSRVQNLKGQFGNLYVIITLPTTEQNDSFVRSYFKYGMEIGRPTFVPVQDLEMGFEK 436
              FSRV+ LK QF +LY+++TLPT EQNDSFV SYFK GME+GRPTFVPVQD+EMGFEK
Sbjct: 61  LPTFSRVKKLKEQFAHLYIVVTLPTREQNDSFVHSYFKLGMELGRPTFVPVQDMEMGFEK 120

Query: 437 IVKIAHARGVCKRQDALSKLKVEREQSVERMDAFLRVVTSIPGIDN 574
           IVKIAHARGVCKRQD +SKL+ ER++SV+ MD FLRV+TSIPGIDN
Sbjct: 121 IVKIAHARGVCKRQDVISKLRAERKKSVQGMDVFLRVITSIPGIDN 166


>ref|XP_002525512.1| conserved hypothetical protein [Ricinus communis]
           gi|223535191|gb|EEF36870.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 248

 Score =  261 bits (668), Expect = 4e-68
 Identities = 122/169 (72%), Positives = 141/169 (83%)
 Frame = +2

Query: 68  GVCMMRSNWRDEQHPSFIHFICSFLRENSFRLNIVPISPDFIFNCGGLSVAFVFVTNWDS 247
           GVCMM S W+ EQ PSFI+F+ SFL  NSFRLN VPISPD IFNCGG+SVAF+F+TNWD 
Sbjct: 26  GVCMMNSKWKQEQSPSFINFVSSFLSANSFRLNFVPISPDCIFNCGGMSVAFIFITNWDC 85

Query: 248 DSMSSIFSRVQNLKGQFGNLYVIITLPTTEQNDSFVRSYFKYGMEIGRPTFVPVQDLEMG 427
           D++  IF+RV+ LKGQF NLYV++ LPT   NDSFVRSYFK+GME GRPTFVPV D EMG
Sbjct: 86  DNVMPIFTRVEKLKGQFANLYVVVCLPTKNHNDSFVRSYFKFGMEFGRPTFVPVLDKEMG 145

Query: 428 FEKIVKIAHARGVCKRQDALSKLKVEREQSVERMDAFLRVVTSIPGIDN 574
           FEKIVKIA +RG CK+QD +SKLK ER Q+++ MD FLRVVTSIPGIDN
Sbjct: 146 FEKIVKIALSRGACKKQDVISKLKAERRQAMQGMDIFLRVVTSIPGIDN 194


>ref|XP_004138826.1| PREDICTED: uncharacterized protein LOC101220741 [Cucumis sativus]
           gi|449490245|ref|XP_004158549.1| PREDICTED:
           uncharacterized LOC101220741 [Cucumis sativus]
          Length = 247

 Score =  256 bits (655), Expect = 1e-66
 Identities = 119/170 (70%), Positives = 146/170 (85%)
 Frame = +2

Query: 65  GGVCMMRSNWRDEQHPSFIHFICSFLRENSFRLNIVPISPDFIFNCGGLSVAFVFVTNWD 244
           GGVC+M + WRDEQHPSFI+FI +FL  NSFRLN VPI+PD IFNCGGLSVAF F+T+W+
Sbjct: 24  GGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVPIAPDLIFNCGGLSVAFAFLTSWE 83

Query: 245 SDSMSSIFSRVQNLKGQFGNLYVIITLPTTEQNDSFVRSYFKYGMEIGRPTFVPVQDLEM 424
             + SSIFSRVQ LK QF NLYV++ LPT EQNDSFV+SYF+ GMEIG+P FV VQD+EM
Sbjct: 84  CSNTSSIFSRVQKLKKQFANLYVVVVLPTKEQNDSFVQSYFRNGMEIGKPPFVAVQDIEM 143

Query: 425 GFEKIVKIAHARGVCKRQDALSKLKVEREQSVERMDAFLRVVTSIPGIDN 574
           GFEKIVKIAH+RG CK+QD +SKL+ ER++SV+ MDAF RV++S+PG+D+
Sbjct: 144 GFEKIVKIAHSRGACKQQDIISKLRTERKRSVQVMDAFRRVMSSVPGLDD 193


Top