BLASTX nr result

ID: Coptis25_contig00020006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00020006
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155482.1| PREDICTED: LOW QUALITY PROTEIN: protein STRU...   211   4e-53
ref|XP_004137013.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMIL...   211   4e-53
ref|XP_002517969.1| lrr receptor-linked protein kinase, putative...   211   6e-53
ref|XP_002872781.1| hypothetical protein ARALYDRAFT_490225 [Arab...   206   2e-51
ref|XP_002305672.1| predicted protein [Populus trichocarpa] gi|2...   204   5e-51

>ref|XP_004155482.1| PREDICTED: LOW QUALITY PROTEIN: protein STRUBBELIG-RECEPTOR FAMILY
           3-like [Cucumis sativus]
          Length = 791

 Score =  211 bits (538), Expect = 4e-53
 Identities = 101/141 (71%), Positives = 123/141 (87%), Gaps = 2/141 (1%)
 Frame = +3

Query: 3   ISKLQNANVLELEGYCVEHGQRLLIYEYCCNGTLHDALHSDG-LPKKLSWNARIRVALGA 179
           I ++++ANV+EL GYC EHG+RLLI+EYC  GTL DALHSD    KKLSWNARIR+ALGA
Sbjct: 551 IDRIRHANVVELSGYCAEHGERLLIFEYCSGGTLQDALHSDEEFRKKLSWNARIRMALGA 610

Query: 180 ARALEYLHEVCHPPMIHQKFKSANVLLDDELAVRVSDCGLAPLMSAGSVNQMSGQ-ISSK 356
           ARALEYLHEVC PP+IH+ FKSAN+LLDD+L+VRVSDCGLAPL+S G+V+Q+SGQ +++ 
Sbjct: 611 ARALEYLHEVCQPPVIHRNFKSANILLDDDLSVRVSDCGLAPLISKGAVSQLSGQLLTAY 670

Query: 357 GYGAPEFEMGTYSCQSDVYSF 419
           GYGAPEFE G Y+ +SDVYSF
Sbjct: 671 GYGAPEFESGVYTLESDVYSF 691


>ref|XP_004137013.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 3-like [Cucumis
           sativus]
          Length = 721

 Score =  211 bits (538), Expect = 4e-53
 Identities = 101/141 (71%), Positives = 123/141 (87%), Gaps = 2/141 (1%)
 Frame = +3

Query: 3   ISKLQNANVLELEGYCVEHGQRLLIYEYCCNGTLHDALHSDG-LPKKLSWNARIRVALGA 179
           I ++++ANV+EL GYC EHG+RLLI+EYC  GTL DALHSD    KKLSWNARIR+ALGA
Sbjct: 481 IDRIRHANVVELSGYCAEHGERLLIFEYCSGGTLQDALHSDEEFRKKLSWNARIRMALGA 540

Query: 180 ARALEYLHEVCHPPMIHQKFKSANVLLDDELAVRVSDCGLAPLMSAGSVNQMSGQ-ISSK 356
           ARALEYLHEVC PP+IH+ FKSAN+LLDD+L+VRVSDCGLAPL+S G+V+Q+SGQ +++ 
Sbjct: 541 ARALEYLHEVCQPPVIHRNFKSANILLDDDLSVRVSDCGLAPLISKGAVSQLSGQLLTAY 600

Query: 357 GYGAPEFEMGTYSCQSDVYSF 419
           GYGAPEFE G Y+ +SDVYSF
Sbjct: 601 GYGAPEFESGVYTLESDVYSF 621


>ref|XP_002517969.1| lrr receptor-linked protein kinase, putative [Ricinus communis]
           gi|223542951|gb|EEF44487.1| lrr receptor-linked protein
           kinase, putative [Ricinus communis]
          Length = 709

 Score =  211 bits (536), Expect = 6e-53
 Identities = 101/141 (71%), Positives = 121/141 (85%), Gaps = 2/141 (1%)
 Frame = +3

Query: 3   ISKLQNANVLELEGYCVEHGQRLLIYEYCCNGTLHDALHSDG-LPKKLSWNARIRVALGA 179
           I ++++ANV+EL GYC EHGQRLLIYEYC NGTL DALHSD  L KKLSWN RIR+ALGA
Sbjct: 469 IDRIRHANVVELMGYCAEHGQRLLIYEYCSNGTLQDALHSDDELKKKLSWNTRIRMALGA 528

Query: 180 ARALEYLHEVCHPPMIHQKFKSANVLLDDELAVRVSDCGLAPLMSAGSVNQMSGQ-ISSK 356
           ARALEYLHEVC PP++H+ FKS N+LLDD+L VRVSDCGLAPL+S+GSV+Q+SG  +++ 
Sbjct: 529 ARALEYLHEVCQPPVVHRNFKSVNILLDDDLDVRVSDCGLAPLISSGSVSQLSGHLLTAY 588

Query: 357 GYGAPEFEMGTYSCQSDVYSF 419
           GYGAPEFE G Y+  SDV+SF
Sbjct: 589 GYGAPEFESGIYTVHSDVFSF 609


>ref|XP_002872781.1| hypothetical protein ARALYDRAFT_490225 [Arabidopsis lyrata subsp.
           lyrata] gi|297318618|gb|EFH49040.1| hypothetical protein
           ARALYDRAFT_490225 [Arabidopsis lyrata subsp. lyrata]
          Length = 776

 Score =  206 bits (523), Expect = 2e-51
 Identities = 97/141 (68%), Positives = 120/141 (85%), Gaps = 2/141 (1%)
 Frame = +3

Query: 3   ISKLQNANVLELEGYCVEHGQRLLIYEYCCNGTLHDALHSDG-LPKKLSWNARIRVALGA 179
           I +++++N++EL GYC EH QRLL+YEYC NGTL D LHSD    KKLSWN R+ +ALGA
Sbjct: 535 IDRIRHSNIVELVGYCAEHDQRLLVYEYCSNGTLQDGLHSDDEFKKKLSWNTRVSIALGA 594

Query: 180 ARALEYLHEVCHPPMIHQKFKSANVLLDDELAVRVSDCGLAPLMSAGSVNQMSGQ-ISSK 356
           ARALEYLHEVC PP+IH+ FKSANVLLDD+L+V VSDCGLAPL+S+GSV+Q+SGQ +++ 
Sbjct: 595 ARALEYLHEVCEPPIIHRNFKSANVLLDDDLSVLVSDCGLAPLISSGSVSQLSGQLLAAY 654

Query: 357 GYGAPEFEMGTYSCQSDVYSF 419
           GYGAPEF+ G Y+ QSDVYSF
Sbjct: 655 GYGAPEFDSGIYTWQSDVYSF 675


>ref|XP_002305672.1| predicted protein [Populus trichocarpa] gi|222848636|gb|EEE86183.1|
           predicted protein [Populus trichocarpa]
          Length = 667

 Score =  204 bits (520), Expect = 5e-51
 Identities = 95/141 (67%), Positives = 121/141 (85%), Gaps = 2/141 (1%)
 Frame = +3

Query: 3   ISKLQNANVLELEGYCVEHGQRLLIYEYCCNGTLHDALHSDG-LPKKLSWNARIRVALGA 179
           ISKLQ+ N+LE  GYC EHGQRLL+Y+YC NGTL+DALH+D  + +KL+WNARIR+ALGA
Sbjct: 439 ISKLQHDNILEFVGYCNEHGQRLLVYKYCENGTLYDALHADEEIHRKLTWNARIRLALGA 498

Query: 180 ARALEYLHEVCHPPMIHQKFKSANVLLDDELAVRVSDCGLAPLMSAGSVNQMSGQ-ISSK 356
           ARAL+YLHEVC PP++H  FKS+N+LLDD+L  RVSDCGL+PL S+GS  ++SG+ ++S 
Sbjct: 499 ARALQYLHEVCQPPIVHWNFKSSNILLDDKLVARVSDCGLSPLKSSGSATELSGRFLTSH 558

Query: 357 GYGAPEFEMGTYSCQSDVYSF 419
           GYGAPE E+G+Y+C SDVYSF
Sbjct: 559 GYGAPELELGSYTCSSDVYSF 579


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