BLASTX nr result

ID: Coptis25_contig00019998 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019998
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521739.1| auxin:hydrogen symporter, putative [Ricinus ...    93   3e-17
ref|XP_002276744.2| PREDICTED: uncharacterized transporter YBR28...    92   4e-17
emb|CAN62432.1| hypothetical protein VITISV_012649 [Vitis vinifera]    92   4e-17
ref|XP_002306421.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16
ref|XP_003517128.1| PREDICTED: uncharacterized transporter YBR28...    88   1e-15

>ref|XP_002521739.1| auxin:hydrogen symporter, putative [Ricinus communis]
           gi|223539130|gb|EEF40726.1| auxin:hydrogen symporter,
           putative [Ricinus communis]
          Length = 406

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 6/95 (6%)
 Frame = +3

Query: 297 GESQANIVRQLIGV------HEKPGTVWDKVAGIPHQMDMELLTPPTVAAIFGFIF*ATP 458
           GE Q ++V  +  +        +P + W K  GI  Q+  ELL PPT+AAIFGF+F AT 
Sbjct: 203 GEDQEHVVISVPSIKSVDDQESQPASSWSKWIGILRQIMEELLAPPTIAAIFGFLFGATT 262

Query: 459 WLKNLRIGDGAPLGVIQESIKLRGDGTMPCITLNL 563
           +L+NL IG  APL VIQ+SIKL GDGT+PCITL L
Sbjct: 263 FLRNLIIGSSAPLRVIQDSIKLLGDGTIPCITLIL 297


>ref|XP_002276744.2| PREDICTED: uncharacterized transporter YBR287W-like [Vitis
           vinifera] gi|296082565|emb|CBI21570.3| unnamed protein
           product [Vitis vinifera]
          Length = 421

 Score = 92.4 bits (228), Expect = 4e-17
 Identities = 48/103 (46%), Positives = 64/103 (62%), Gaps = 7/103 (6%)
 Frame = +3

Query: 276 TKPFTGDGESQANIVRQLIGVHEKPGTV-------WDKVAGIPHQMDMELLTPPTVAAIF 434
           T  F     +  ++ +Q+I   E  G++       W +VAGI  QM  ELL+PPT+ AI 
Sbjct: 210 TSSFPPSNSTGEDVEKQVIVSQESAGSLEDGKESFWARVAGIASQMMKELLSPPTLGAIL 269

Query: 435 GFIF*ATPWLKNLRIGDGAPLGVIQESIKLRGDGTMPCITLNL 563
           GF+F A PWLKN   GD APL V+Q+S+KL  +GT+PCITL L
Sbjct: 270 GFVFGAVPWLKNFLTGDEAPLRVVQDSVKLLANGTIPCITLIL 312


>emb|CAN62432.1| hypothetical protein VITISV_012649 [Vitis vinifera]
          Length = 436

 Score = 92.4 bits (228), Expect = 4e-17
 Identities = 48/103 (46%), Positives = 64/103 (62%), Gaps = 7/103 (6%)
 Frame = +3

Query: 276 TKPFTGDGESQANIVRQLIGVHEKPGTV-------WDKVAGIPHQMDMELLTPPTVAAIF 434
           T  F     +  ++ +Q+I   E  G++       W +VAGI  QM  ELL+PPT+ AI 
Sbjct: 225 TSSFPPSNSTGEDVEKQVIVSQESAGSLEDGKESFWARVAGIASQMMKELLSPPTLGAIL 284

Query: 435 GFIF*ATPWLKNLRIGDGAPLGVIQESIKLRGDGTMPCITLNL 563
           GF+F A PWLKN   GD APL V+Q+S+KL  +GT+PCITL L
Sbjct: 285 GFVFGAVPWLKNFLTGDEAPLRVVQDSVKLLANGTIPCITLIL 327


>ref|XP_002306421.1| predicted protein [Populus trichocarpa] gi|222855870|gb|EEE93417.1|
           predicted protein [Populus trichocarpa]
          Length = 397

 Score = 89.0 bits (219), Expect = 5e-16
 Identities = 50/91 (54%), Positives = 60/91 (65%), Gaps = 2/91 (2%)
 Frame = +3

Query: 297 GESQANIVRQLIGVHEKPGTV--WDKVAGIPHQMDMELLTPPTVAAIFGFIF*ATPWLKN 470
           G+ Q N+      +    G V  W K+ G  HQ+  ELL PPT+AAI GFIF AT +L+N
Sbjct: 203 GQDQENVA-----IEHGKGNVSSWTKLIGFLHQILEELLEPPTIAAILGFIFGATTFLRN 257

Query: 471 LRIGDGAPLGVIQESIKLRGDGTMPCITLNL 563
           L IG  APL VIQ+SIKL GDGT+PCITL L
Sbjct: 258 LIIGSEAPLRVIQDSIKLLGDGTIPCITLIL 288


>ref|XP_003517128.1| PREDICTED: uncharacterized transporter YBR287W-like isoform 2
           [Glycine max]
          Length = 419

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 42/96 (43%), Positives = 62/96 (64%)
 Frame = +3

Query: 276 TKPFTGDGESQANIVRQLIGVHEKPGTVWDKVAGIPHQMDMELLTPPTVAAIFGFIF*AT 455
           T  + GD E+Q  + +    V +K  + W ++  +   +  EL++PP +A  FGF+F A 
Sbjct: 215 TSTYIGDTENQIIVDQDQSNVSKKTESSWHRMVEVMSHLLAELVSPPAIATFFGFLFGAV 274

Query: 456 PWLKNLRIGDGAPLGVIQESIKLRGDGTMPCITLNL 563
            WL+NL IGD APL VIQ+S++L G+GT+PCITL L
Sbjct: 275 AWLRNLIIGDNAPLRVIQDSLQLLGNGTIPCITLLL 310


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