BLASTX nr result
ID: Coptis25_contig00019988
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00019988 (204 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002308937.1| ABC transporter family, cholesterol/phosphol... 108 3e-22 ref|XP_002529511.1| abc transporter, putative [Ricinus communis]... 107 1e-21 emb|CBI29824.3| unnamed protein product [Vitis vinifera] 100 9e-20 ref|XP_002284204.1| PREDICTED: ABC transporter A family member 1... 100 9e-20 ref|XP_003521172.1| PREDICTED: ABC transporter A family member 1... 100 2e-19 >ref|XP_002308937.1| ABC transporter family, cholesterol/phospholipid flippase [Populus trichocarpa] gi|222854913|gb|EEE92460.1| ABC transporter family, cholesterol/phospholipid flippase [Populus trichocarpa] Length = 1891 Score = 108 bits (271), Expect = 3e-22 Identities = 54/63 (85%), Positives = 58/63 (92%) Frame = +3 Query: 9 LPTFSLFMVYGLAIAASTYCLTFFFSEHSTAQNVVLLVHFFTGLILMVISFIMGLIETTK 188 LPTF +F+ YGLAIA+STYCLTF FSEHS AQNVVLLVHFFTGLILMVISFIMGLI+TT Sbjct: 1270 LPTFLMFLEYGLAIASSTYCLTFCFSEHSMAQNVVLLVHFFTGLILMVISFIMGLIQTTA 1329 Query: 189 SAN 197 SAN Sbjct: 1330 SAN 1332 >ref|XP_002529511.1| abc transporter, putative [Ricinus communis] gi|223531027|gb|EEF32880.1| abc transporter, putative [Ricinus communis] Length = 1722 Score = 107 bits (266), Expect = 1e-21 Identities = 52/65 (80%), Positives = 58/65 (89%) Frame = +3 Query: 9 LPTFSLFMVYGLAIAASTYCLTFFFSEHSTAQNVVLLVHFFTGLILMVISFIMGLIETTK 188 LPT LF+ YGLA+A+STYCLTF FS+H+ AQNVVLLVHFFTGLILMVISFIMGLIETT Sbjct: 1151 LPTIFLFLEYGLAVASSTYCLTFLFSDHTMAQNVVLLVHFFTGLILMVISFIMGLIETTT 1210 Query: 189 SANMI 203 SAN + Sbjct: 1211 SANNV 1215 >emb|CBI29824.3| unnamed protein product [Vitis vinifera] Length = 2001 Score = 100 bits (250), Expect = 9e-20 Identities = 47/64 (73%), Positives = 57/64 (89%) Frame = +3 Query: 12 PTFSLFMVYGLAIAASTYCLTFFFSEHSTAQNVVLLVHFFTGLILMVISFIMGLIETTKS 191 PT +F+ YGLAIA+STYCLTF FS+H+ AQNVVLL+HFFTGL+LMVISFIMGLI+TT+S Sbjct: 1381 PTVLMFLEYGLAIASSTYCLTFSFSDHTMAQNVVLLLHFFTGLVLMVISFIMGLIQTTES 1440 Query: 192 ANMI 203 N + Sbjct: 1441 TNSV 1444 >ref|XP_002284204.1| PREDICTED: ABC transporter A family member 1-like [Vitis vinifera] Length = 1881 Score = 100 bits (250), Expect = 9e-20 Identities = 47/64 (73%), Positives = 57/64 (89%) Frame = +3 Query: 12 PTFSLFMVYGLAIAASTYCLTFFFSEHSTAQNVVLLVHFFTGLILMVISFIMGLIETTKS 191 PT +F+ YGLAIA+STYCLTF FS+H+ AQNVVLL+HFFTGL+LMVISFIMGLI+TT+S Sbjct: 1261 PTVLMFLEYGLAIASSTYCLTFSFSDHTMAQNVVLLLHFFTGLVLMVISFIMGLIQTTES 1320 Query: 192 ANMI 203 N + Sbjct: 1321 TNSV 1324 >ref|XP_003521172.1| PREDICTED: ABC transporter A family member 1-like [Glycine max] Length = 1892 Score = 100 bits (248), Expect = 2e-19 Identities = 48/65 (73%), Positives = 57/65 (87%) Frame = +3 Query: 3 SLLPTFSLFMVYGLAIAASTYCLTFFFSEHSTAQNVVLLVHFFTGLILMVISFIMGLIET 182 SLLPT + + YGLAIA+STYCLTFFF +H+ AQNVVLL+HFF+GLILMVISFIMGL+ + Sbjct: 1268 SLLPTILMLLEYGLAIASSTYCLTFFFFDHTMAQNVVLLIHFFSGLILMVISFIMGLMPS 1327 Query: 183 TKSAN 197 T SAN Sbjct: 1328 TMSAN 1332