BLASTX nr result

ID: Coptis25_contig00019982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019982
         (1845 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268852.1| PREDICTED: uncharacterized protein LOC100257...   716   0.0  
ref|XP_003546288.1| PREDICTED: uncharacterized protein LOC100779...   674   0.0  
ref|XP_003534794.1| PREDICTED: uncharacterized protein LOC100804...   673   0.0  
ref|XP_002299018.1| predicted protein [Populus trichocarpa] gi|2...   665   0.0  
ref|XP_002523146.1| nucleic acid binding protein, putative [Rici...   650   0.0  

>ref|XP_002268852.1| PREDICTED: uncharacterized protein LOC100257655 [Vitis vinifera]
            gi|297740887|emb|CBI31069.3| unnamed protein product
            [Vitis vinifera]
          Length = 705

 Score =  716 bits (1849), Expect = 0.0
 Identities = 365/585 (62%), Positives = 416/585 (71%), Gaps = 2/585 (0%)
 Frame = -1

Query: 1749 SSKHLLKFTPSVSPSSLHTYHSPQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAFPTT 1570
            +SKHLLK TPS  P  L+   SP +                             SAFP  
Sbjct: 36   ASKHLLKPTPSTLPLKLNL-SSPGII----------------------------SAFPLK 66

Query: 1569 QKPNFLNFSIKKCGLSYAAYQKVPRPVQVERKEIETLESARFEILKKKLEAAGIDCDTCM 1390
                 L  S+K   L Y ++  VP PV  E  E  +  SAR  +LKKKLE  G D     
Sbjct: 67   PNSRILPISLKTFALPYTSHSNVPGPVYSENPEDTSNSSARLNVLKKKLEVIGFDTQMLK 126

Query: 1389 VGEYNRLICPECDGGDTREKSFSLFIAQDVNLAMWQCFRAKCGWRGHVRAFESGKETYSN 1210
             G+Y+ L CP C GGD+ EKS SLFI  D + A+W C R KCG RG++RAF +   +Y  
Sbjct: 127  TGQYSHLTCPTCKGGDSMEKSLSLFITLDGDHAVWMCHRGKCGSRGNIRAFVNDSSSYGR 186

Query: 1209 PEEIAKVKRIQVITEESIGLEPLCNELLAYFSERNISGETLRRNGVMQKT-GSEVAIAFT 1033
              +I K+K  + ITEES+GL+PLC+EL+AYF ER IS +TL RN VMQK+ G +  IAFT
Sbjct: 187  LNQITKIKPKREITEESLGLKPLCSELVAYFGERMISEKTLARNSVMQKSYGDQFIIAFT 246

Query: 1032 YRRNGVLVSCKYRDINKKFWQEKDTEKILYGLDDIKEETDIIIVEGEIDKLSMEEAGFRN 853
            YRRNGVLVSCKYRD+NK FWQEKDTEKI YG+DDIKE +DIIIVEGEIDKLSMEEAGF N
Sbjct: 247  YRRNGVLVSCKYRDVNKNFWQEKDTEKIFYGVDDIKEASDIIIVEGEIDKLSMEEAGFYN 306

Query: 852  CVSVPDGAPSKVSEKM-PSEEKDTKYQYLWNCKDYLSKASRIILATDADAPGQXXXXXXX 676
            CVSVPDGAP  VS K+  S EKD KYQYLWNCK+YL KASRIILATD DAPG        
Sbjct: 307  CVSVPDGAPPSVSTKVFESAEKDIKYQYLWNCKEYLEKASRIILATDGDAPGLALAEELA 366

Query: 675  XXXXXXRCWRVKWPKKTEAEVYKDANEVLMCLGPHALREVIDQAELYPIRGLFTFRDFFG 496
                  RCWRVKWPKK E E +KDANEVLM LGP  L+EVI+ AE+YPI+GLF F  +F 
Sbjct: 367  RRLGRERCWRVKWPKKNEVEHFKDANEVLMYLGPDVLKEVIENAEIYPIQGLFNFSHYFN 426

Query: 495  EIDQYYYQRLGCELGASTGWTGVDGYYKVVPGELTIVTGVPNSGKSEWIDALLCNINESK 316
            EID YY+  LG ELG STGW G++G Y VVPGELT+VTGVPNSGKSEWIDALLCNIN S 
Sbjct: 427  EIDGYYHHTLGFELGVSTGWRGLNGLYNVVPGELTVVTGVPNSGKSEWIDALLCNINRSV 486

Query: 315  GWKFALCSMENKVREHARKLMEKHMRKPFFTAGYSGSTERMTEEEFERGKQWLNETFHLI 136
            GW FALCSMENKVREHARKL+EKH++KPFF AGY  S ERMT EEFE GK+WL+ETF+LI
Sbjct: 487  GWSFALCSMENKVREHARKLLEKHIKKPFFKAGYGESIERMTVEEFELGKKWLSETFYLI 546

Query: 135  RCDDDCLPSITWVLDLAKAAVLRHGVEGLVIDPYNELDHQRPPNQ 1
            RC+ D LP+I WVLDLAK+AVLRHGV GLVIDPYNELDHQRPP Q
Sbjct: 547  RCEKDSLPNIKWVLDLAKSAVLRHGVRGLVIDPYNELDHQRPPGQ 591


>ref|XP_003546288.1| PREDICTED: uncharacterized protein LOC100779625 [Glycine max]
          Length = 678

 Score =  674 bits (1739), Expect = 0.0
 Identities = 327/512 (63%), Positives = 392/512 (76%), Gaps = 2/512 (0%)
 Frame = -1

Query: 1530 GLSYAAYQKVPRPVQVERKEIETLESARFEILKKKLEAAGIDCDTCMVGEYNRLICPECD 1351
            G   +++  +PRPVQ+E    +++E  +  ILKKKLEA G++   C  G+YN L+CPEC 
Sbjct: 53   GYHGSSHASIPRPVQLESPMEKSVEF-QLNILKKKLEAIGMETGMCEPGQYNHLLCPECL 111

Query: 1350 GGDTREKSFSLFIAQDVNLAMWQCFRAKCGWRGHVRAFESGKETYSNPEEIAKVKRIQVI 1171
            GGD  E+S SL+IA D   A W CFR KCGW+G  +AF       +   ++  VK+I+ I
Sbjct: 112  GGDQEERSLSLYIAPDGGSAAWNCFRGKCGWKGSTQAFAGSSSART---QVDPVKKIRKI 168

Query: 1170 TEESIGLEPLCNELLAYFSERNISGETLRRNGVMQ-KTGSEVAIAFTYRRNGVLVSCKYR 994
            TEE + LEPLC+EL+ YFSER IS +TL RNGV Q K   ++ IAF YRRNG L+SCKYR
Sbjct: 169  TEEELELEPLCDELVVYFSERLISKQTLERNGVKQRKYDDQIVIAFPYRRNGGLISCKYR 228

Query: 993  DINKKFWQEKDTEKILYGLDDIKEETDIIIVEGEIDKLSMEEAGFRNCVSVPDGAPSKVS 814
            DINK FWQE +TEKI YGLDDI   +DIIIVEGE+DKL+MEEAGF NCVSVPDGAP  +S
Sbjct: 229  DINKMFWQEANTEKIFYGLDDIVGHSDIIIVEGEMDKLAMEEAGFLNCVSVPDGAPPSIS 288

Query: 813  EK-MPSEEKDTKYQYLWNCKDYLSKASRIILATDADAPGQXXXXXXXXXXXXXRCWRVKW 637
             K +P ++KD KYQYLWNCKD L KA+R+ILATD D PGQ             +CWRV+W
Sbjct: 289  SKELPPQDKDKKYQYLWNCKDELKKATRVILATDGDPPGQALAEELARRIGKEKCWRVRW 348

Query: 636  PKKTEAEVYKDANEVLMCLGPHALREVIDQAELYPIRGLFTFRDFFGEIDQYYYQRLGCE 457
            P+K+ ++  KDANEVLM LGP AL+EVI+ AELYPIRGLF FRD+F EID YY++ LG +
Sbjct: 349  PRKSRSDNCKDANEVLMYLGPDALKEVIENAELYPIRGLFNFRDYFDEIDAYYHRTLGYD 408

Query: 456  LGASTGWTGVDGYYKVVPGELTIVTGVPNSGKSEWIDALLCNINESKGWKFALCSMENKV 277
            +G STGW  ++  Y VVPGELTIVTGVPNSGKSEWIDALLCN+NE  GWKFALCSMENKV
Sbjct: 409  IGISTGWNNLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNEIVGWKFALCSMENKV 468

Query: 276  REHARKLMEKHMRKPFFTAGYSGSTERMTEEEFERGKQWLNETFHLIRCDDDCLPSITWV 97
            REHARKL+EKH++KPFF   Y  S ERM+ EEFE+GK WL++TF LIRC+DD LP+I+WV
Sbjct: 469  REHARKLLEKHLKKPFFNERYGESVERMSVEEFEQGKLWLSDTFSLIRCEDDSLPNISWV 528

Query: 96   LDLAKAAVLRHGVEGLVIDPYNELDHQRPPNQ 1
            LDLAKAAVLRHGV GLVIDPYNELDHQRPPNQ
Sbjct: 529  LDLAKAAVLRHGVRGLVIDPYNELDHQRPPNQ 560


>ref|XP_003534794.1| PREDICTED: uncharacterized protein LOC100804637 [Glycine max]
          Length = 679

 Score =  673 bits (1736), Expect = 0.0
 Identities = 327/513 (63%), Positives = 391/513 (76%), Gaps = 3/513 (0%)
 Frame = -1

Query: 1530 GLSYAAYQKVPRPVQVERKEIETLESARFEILKKKLEAAGIDCDTCMVGEYNRLICPECD 1351
            G   A+   +PRPVQ+E    + +E  +  ILKKKLEA G++ + C  G+YN L+CPEC 
Sbjct: 53   GYHGASQASIPRPVQLESPVEKNME-LQLNILKKKLEAIGVETEMCEPGQYNHLLCPECL 111

Query: 1350 GGDTREKSFSLFIAQDVNLAMWQCFRAKCGWRGHVRAFESGKETYSNPEEIAKVKRIQVI 1171
            GGD  E+S SL+IA D   A W CFR KCGW+G  +AF       +   ++A VK+I+ I
Sbjct: 112  GGDQEERSLSLYIAPDGGSAAWNCFRGKCGWKGSTQAFAGSNSART---QLAPVKKIRKI 168

Query: 1170 TEESIGLEPLCNELLAYFSERNISGETLRRNGVMQ-KTGSEVAIAFTYRRNGVLVSCKYR 994
            TEE + LEPLC+EL+ YFSER IS +TL RNGV Q K   ++ IAF Y +NG L+SCKYR
Sbjct: 169  TEEELELEPLCDELVTYFSERLISKQTLERNGVKQRKYDDQIVIAFPYHQNGGLISCKYR 228

Query: 993  DINKKFWQEKDTEKILYGLDDIKEETDIIIVEGEIDKLSMEEAGFRNCVSVPDGAPSKVS 814
            DINK FWQE +TEKI YGLDDI    DIIIVEGE+DKL+MEEAGF NCVSVPDGAP  VS
Sbjct: 229  DINKMFWQEANTEKIFYGLDDIVGHNDIIIVEGEMDKLAMEEAGFFNCVSVPDGAPPSVS 288

Query: 813  --EKMPSEEKDTKYQYLWNCKDYLSKASRIILATDADAPGQXXXXXXXXXXXXXRCWRVK 640
              E++P ++KD KYQYLWNCKD L KA+R+ILATD D PGQ             +CWRV+
Sbjct: 289  SKEELPPQDKDKKYQYLWNCKDELKKATRVILATDGDPPGQALAEELARRIGKEKCWRVR 348

Query: 639  WPKKTEAEVYKDANEVLMCLGPHALREVIDQAELYPIRGLFTFRDFFGEIDQYYYQRLGC 460
            WP+K+ ++  KDANEVLM LGP AL+EVI+ AELYPIRGLF FRD+F EID YY++ LG 
Sbjct: 349  WPRKSRSDNCKDANEVLMYLGPDALKEVIENAELYPIRGLFNFRDYFDEIDAYYHRTLGY 408

Query: 459  ELGASTGWTGVDGYYKVVPGELTIVTGVPNSGKSEWIDALLCNINESKGWKFALCSMENK 280
            ++G STGW  ++  Y VVPGELTIVTGVPNSGKSEWIDALLCN+NE  GWKFALCSMENK
Sbjct: 409  DIGISTGWNNLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNEIAGWKFALCSMENK 468

Query: 279  VREHARKLMEKHMRKPFFTAGYSGSTERMTEEEFERGKQWLNETFHLIRCDDDCLPSITW 100
            VREHARKL+EKH++KPFF   Y  S ERM+ EEFE+GK WL++TF LIRC+D+ LP+I+W
Sbjct: 469  VREHARKLLEKHLKKPFFNERYGESVERMSVEEFEQGKLWLSDTFSLIRCEDNSLPNISW 528

Query: 99   VLDLAKAAVLRHGVEGLVIDPYNELDHQRPPNQ 1
            VLDLAKAAVLRHGV GLVIDPYNELDHQRPPNQ
Sbjct: 529  VLDLAKAAVLRHGVRGLVIDPYNELDHQRPPNQ 561


>ref|XP_002299018.1| predicted protein [Populus trichocarpa] gi|222846276|gb|EEE83823.1|
            predicted protein [Populus trichocarpa]
          Length = 658

 Score =  665 bits (1717), Expect = 0.0
 Identities = 329/514 (64%), Positives = 382/514 (74%), Gaps = 28/514 (5%)
 Frame = -1

Query: 1461 LESARFEILKKKLEAAGIDCDTCMVGEYNRLICPECDGGDTREKSFSLFIAQDVNLAMWQ 1282
            ++ ++ EIL+ KL   GI+ D    G+YN L CP C GG ++EKSFSLFI+ D   A W 
Sbjct: 20   VKKSKLEILRFKLAEVGIELDHFAPGQYNALTCPMCKGGGSKEKSFSLFISADGGNASWN 79

Query: 1281 CFRAKCGWRGHVRAFESGKETYSNPEEIAKVKRIQVITEESIGLEPLCNELLA------- 1123
            CFRAKCGW G  + F   K TY    +++KVK I+ ITE+S+ LEPLC+E++A       
Sbjct: 80   CFRAKCGWNGGTKPFAGSKSTYGTSLKLSKVKEIREITEQSLELEPLCDEVVALSFYLCV 139

Query: 1122 -----------------YFSERNISGETLRRNGVMQK---TGSEVAIAFTYRRNGVLVSC 1003
                             YF ER IS ETL RN VMQK      +VAIAFTYRRNGVLVSC
Sbjct: 140  LILILSCMMLIWVMLVCYFKERLISAETLARNQVMQKGYGDRGQVAIAFTYRRNGVLVSC 199

Query: 1002 KYRDINKKFWQEKDTEKILYGLDDIKEETDIIIVEGEIDKLSMEEAGFRNCVSVPDGAPS 823
            KYRDINK+FWQEKDT+K+ YGLDDIK   +IIIVEGE+DKL+MEEAGFRNCVSVPDGAP 
Sbjct: 200  KYRDINKRFWQEKDTKKVFYGLDDIKGADEIIIVEGEMDKLAMEEAGFRNCVSVPDGAPP 259

Query: 822  KVSEK-MPSEEKDTKYQYLWNCKDYLSKASRIILATDADAPGQXXXXXXXXXXXXXRCWR 646
             VS K +P  ++DTKYQYLWNCK+YL K SRIILATD D PGQ             RCWR
Sbjct: 260  SVSPKELPPNQEDTKYQYLWNCKEYLDKVSRIILATDGDPPGQALAEELARRLGRERCWR 319

Query: 645  VKWPKKTEAEVYKDANEVLMCLGPHALREVIDQAELYPIRGLFTFRDFFGEIDQYYYQRL 466
            VKWPKK   E +KDANEVLM  GP ALR++I+ AELYPIRGLF F D+F EID YY + L
Sbjct: 320  VKWPKKNTDEHFKDANEVLMFSGPLALRDIIENAELYPIRGLFQFSDYFPEIDAYYNRTL 379

Query: 465  GCELGASTGWTGVDGYYKVVPGELTIVTGVPNSGKSEWIDALLCNINESKGWKFALCSME 286
            G E GASTGWT ++  Y V+PGELT+VTGVPNSGKSEWIDALLCN+NES GWKFALCSME
Sbjct: 380  GYEFGASTGWTALNEIYNVMPGELTLVTGVPNSGKSEWIDALLCNLNESVGWKFALCSME 439

Query: 285  NKVREHARKLMEKHMRKPFFTAGYSGSTERMTEEEFERGKQWLNETFHLIRCDDDCLPSI 106
            N VR+HARKL+EKHM+KPFF A Y  S ERM+ +E E GKQWL++TF+LIRC+DD LP+I
Sbjct: 440  NNVRQHARKLLEKHMKKPFFDARYGESAERMSAKELEEGKQWLSDTFYLIRCEDDALPNI 499

Query: 105  TWVLDLAKAAVLRHGVEGLVIDPYNELDHQRPPN 4
             WVLDLA+AAVLRHGV GLVIDPYNELDHQRPPN
Sbjct: 500  KWVLDLARAAVLRHGVRGLVIDPYNELDHQRPPN 533


>ref|XP_002523146.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223537553|gb|EEF39177.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 700

 Score =  650 bits (1676), Expect = 0.0
 Identities = 322/513 (62%), Positives = 383/513 (74%), Gaps = 12/513 (2%)
 Frame = -1

Query: 1512 YQKVPRPVQVERKEIETLESARFEILKKKLEAAGIDCDTCMVGEYNRLICPECDGGDTRE 1333
            +  +P PV  E  E   LE      L+ KLE  GI  +  + G+Y+ L+CP C+GG + E
Sbjct: 83   FATLPAPVSSEDSEKPHLEK-----LRGKLEVLGIQMENLVPGQYSSLLCPMCNGGQSGE 137

Query: 1332 KSFSLFIAQDVNLAMWQCFRAKCGWRGH-----VRAFESGKETYSNPEEIAKVKRIQVIT 1168
            +S SLFI+ D   A W CFR KCGW G      V+++     TY +  +  KVK  + IT
Sbjct: 138  RSLSLFISPDGANATWNCFRGKCGWNGGTKLLLVQSYAGRHSTYESSVQPKKVKLTRKIT 197

Query: 1167 EESIGLEPLCNELLAYFSERNISGETLRRNGVMQKT-GSEVAIAFTYRRNGVLVSCKYRD 991
             E +GL+PLC E+L +F+ER IS ETL RN VMQ++ G+++ IAFTY RNG L SCKYRD
Sbjct: 198  VEGLGLQPLCTEILGFFAERLISAETLHRNRVMQRSYGNQIVIAFTYWRNGELTSCKYRD 257

Query: 990  INKKFWQEKDTEKILYGLDDIKEETDIIIVEGEIDKLSMEEAGFRNCVSVPDGAPSKVSE 811
            INK FWQE DT+KI YGLDDIKE  DIIIVEGE+DKL+MEEAGFRNCVSVPDGAP +VS+
Sbjct: 258  INKNFWQESDTDKIFYGLDDIKETDDIIIVEGEMDKLAMEEAGFRNCVSVPDGAPGQVSQ 317

Query: 810  K-MPSEEKDTKYQYLWNCKDYLSKASRIILATDADAPGQXXXXXXXXXXXXXRCWRVKWP 634
            K +PS+E+DTKYQYLWNCK+YL KASRIILATD D PGQ             RCWR++WP
Sbjct: 318  KELPSKEQDTKYQYLWNCKEYLDKASRIILATDGDPPGQALAEEIARRIGRERCWRIRWP 377

Query: 633  KKTEAEVYKDANEVLMCLGPHALREVIDQAELYPIRGLFTFRDFFGEIDQYYYQRLGCEL 454
            KK++   +KDANEVLM LGP ALREVID AELYPI GLF F ++F EID YY++ LG E 
Sbjct: 378  KKSKDTHFKDANEVLMYLGPTALREVIDNAELYPISGLFNFMEYFDEIDAYYHRTLGLEY 437

Query: 453  GASTGWTGVDGYYKVVPGELTIVTGVPNSGKSEWIDALLCNINESKGWKFALCSMENKVR 274
            GASTGW+ +DG Y V+PGELTIVTGVPNSGKSEWIDALLCN+N S GWKFALCSMEN+VR
Sbjct: 438  GASTGWSSLDGLYNVMPGELTIVTGVPNSGKSEWIDALLCNLNRSVGWKFALCSMENRVR 497

Query: 273  EHARKLMEKHMRKPFFTAGYSGS-----TERMTEEEFERGKQWLNETFHLIRCDDDCLPS 109
            EHARKL+EK ++KPFF A Y+        +RM  EEFE GKQWL +TF+LIRC+DD LPS
Sbjct: 498  EHARKLLEKRIKKPFFDARYASDIDGQFVKRMNVEEFEEGKQWLADTFYLIRCEDDKLPS 557

Query: 108  ITWVLDLAKAAVLRHGVEGLVIDPYNELDHQRP 10
            + WVL LA+AAVLRHGV GLVIDPYNELDHQRP
Sbjct: 558  VDWVLKLARAAVLRHGVRGLVIDPYNELDHQRP 590


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