BLASTX nr result

ID: Coptis25_contig00019979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019979
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509825.1| nucleoside-triphosphatase, putative [Ricinus...   189   2e-46
emb|CBI18349.3| unnamed protein product [Vitis vinifera]              186   2e-45
ref|XP_002267070.1| PREDICTED: uncharacterized protein LOC100245...   186   2e-45
emb|CAN74345.1| hypothetical protein VITISV_005477 [Vitis vinifera]   186   2e-45
ref|XP_002303599.1| tir-nbs resistance protein [Populus trichoca...   182   2e-44

>ref|XP_002509825.1| nucleoside-triphosphatase, putative [Ricinus communis]
           gi|223549724|gb|EEF51212.1| nucleoside-triphosphatase,
           putative [Ricinus communis]
          Length = 999

 Score =  189 bits (480), Expect = 2e-46
 Identities = 92/140 (65%), Positives = 113/140 (80%), Gaps = 6/140 (4%)
 Frame = -1

Query: 402 LKTRHRRKNVVLGWN------ENKRDRQTESSSSKGKEPVIWKESEREIEMQRLEIPHGE 241
           LKT+ RRKN+ +GW+      E +RD + E+ + KGKEPV+WKESE+EIEMQ  EIPH +
Sbjct: 384 LKTKPRRKNLTIGWSKSSSMEEKRRDWKWENRAKKGKEPVVWKESEKEIEMQSTEIPHRQ 443

Query: 240 YKALGSKNAGRCRRRKRYVKILYGKGIACVSGDSGIGKTDLILEFAYRFFKRYKMVLWIG 61
           + A  +K A R  +RKR  KI+YGKG+ACVSG+SGIGKT+L+LEFAYR+ +RYKMVLWIG
Sbjct: 444 HHAR-TKGARRYAKRKRSTKIVYGKGVACVSGESGIGKTELLLEFAYRYHQRYKMVLWIG 502

Query: 60  GESRYIRQNYLNLWSFLEVD 1
           GESRYIR NYLNLWSFLEVD
Sbjct: 503 GESRYIRHNYLNLWSFLEVD 522


>emb|CBI18349.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  186 bits (472), Expect = 2e-45
 Identities = 91/140 (65%), Positives = 110/140 (78%), Gaps = 6/140 (4%)
 Frame = -1

Query: 402 LKTRHRRKNVVLGWN------ENKRDRQTESSSSKGKEPVIWKESEREIEMQRLEIPHGE 241
           LK R RRKN+ +GW+      E +R++  ES   KGK+ V+WKESE+EIEMQ  E+P  +
Sbjct: 386 LKARPRRKNLTIGWSKGSSVEERRREQHMESGHRKGKQAVVWKESEKEIEMQSSELPQRQ 445

Query: 240 YKALGSKNAGRCRRRKRYVKILYGKGIACVSGDSGIGKTDLILEFAYRFFKRYKMVLWIG 61
           Y +L SKN G+  R +R  KILYGKGIACVSG+SGIGKTDL+LEFAYR+ +RYKMVLW+G
Sbjct: 446 Y-SLRSKNGGKYGRSRRSAKILYGKGIACVSGESGIGKTDLLLEFAYRYHQRYKMVLWVG 504

Query: 60  GESRYIRQNYLNLWSFLEVD 1
           G SRYIRQNYLNLWSFLEVD
Sbjct: 505 GGSRYIRQNYLNLWSFLEVD 524


>ref|XP_002267070.1| PREDICTED: uncharacterized protein LOC100245966 [Vitis vinifera]
          Length = 1009

 Score =  186 bits (472), Expect = 2e-45
 Identities = 91/140 (65%), Positives = 110/140 (78%), Gaps = 6/140 (4%)
 Frame = -1

Query: 402 LKTRHRRKNVVLGWN------ENKRDRQTESSSSKGKEPVIWKESEREIEMQRLEIPHGE 241
           LK R RRKN+ +GW+      E +R++  ES   KGK+ V+WKESE+EIEMQ  E+P  +
Sbjct: 394 LKARPRRKNLTIGWSKGSSVEERRREQHMESGHRKGKQAVVWKESEKEIEMQSSELPQRQ 453

Query: 240 YKALGSKNAGRCRRRKRYVKILYGKGIACVSGDSGIGKTDLILEFAYRFFKRYKMVLWIG 61
           Y +L SKN G+  R +R  KILYGKGIACVSG+SGIGKTDL+LEFAYR+ +RYKMVLW+G
Sbjct: 454 Y-SLRSKNGGKYGRSRRSAKILYGKGIACVSGESGIGKTDLLLEFAYRYHQRYKMVLWVG 512

Query: 60  GESRYIRQNYLNLWSFLEVD 1
           G SRYIRQNYLNLWSFLEVD
Sbjct: 513 GGSRYIRQNYLNLWSFLEVD 532


>emb|CAN74345.1| hypothetical protein VITISV_005477 [Vitis vinifera]
          Length = 1011

 Score =  186 bits (472), Expect = 2e-45
 Identities = 91/140 (65%), Positives = 110/140 (78%), Gaps = 6/140 (4%)
 Frame = -1

Query: 402 LKTRHRRKNVVLGWN------ENKRDRQTESSSSKGKEPVIWKESEREIEMQRLEIPHGE 241
           LK R RRKN+ +GW+      E +R++  ES   KGK+ V+WKESE+EIEMQ  E+P  +
Sbjct: 396 LKARPRRKNLTIGWSKGSSVEERRREQHMESGHRKGKQAVVWKESEKEIEMQSSELPQRQ 455

Query: 240 YKALGSKNAGRCRRRKRYVKILYGKGIACVSGDSGIGKTDLILEFAYRFFKRYKMVLWIG 61
           Y +L SKN G+  R +R  KILYGKGIACVSG+SGIGKTDL+LEFAYR+ +RYKMVLW+G
Sbjct: 456 Y-SLRSKNGGKYGRSRRSAKILYGKGIACVSGESGIGKTDLLLEFAYRYHQRYKMVLWVG 514

Query: 60  GESRYIRQNYLNLWSFLEVD 1
           G SRYIRQNYLNLWSFLEVD
Sbjct: 515 GGSRYIRQNYLNLWSFLEVD 534


>ref|XP_002303599.1| tir-nbs resistance protein [Populus trichocarpa]
           gi|222841031|gb|EEE78578.1| tir-nbs resistance protein
           [Populus trichocarpa]
          Length = 1005

 Score =  182 bits (462), Expect = 2e-44
 Identities = 91/140 (65%), Positives = 113/140 (80%), Gaps = 6/140 (4%)
 Frame = -1

Query: 402 LKTRHRRKNVVLGWNEN------KRDRQTESSSSKGKEPVIWKESEREIEMQRLEIPHGE 241
           LK R RRKN+ +GWN+N      +R++Q ++SS KGKEPV+WKESEREIEMQ  +    +
Sbjct: 390 LKARPRRKNLTVGWNKNSSVEEKRREQQGDNSSEKGKEPVVWKESEREIEMQSGDFSQRQ 449

Query: 240 YKALGSKNAGRCRRRKRYVKILYGKGIACVSGDSGIGKTDLILEFAYRFFKRYKMVLWIG 61
           +  +  K++GR  +RKR  KILYGKGIACVSG+SGIGKT+L+LEFAYR+ +RYKMVLWIG
Sbjct: 450 H-LVKPKSSGRYGKRKRSTKILYGKGIACVSGESGIGKTELLLEFAYRYHQRYKMVLWIG 508

Query: 60  GESRYIRQNYLNLWSFLEVD 1
           GESRYIRQNYLNL SFL+VD
Sbjct: 509 GESRYIRQNYLNLRSFLDVD 528


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