BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019977
         (1343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]   248   3e-63
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   207   7e-51
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   197   4e-48
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   192   1e-46
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   188   2e-45

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score =  248 bits (632), Expect = 3e-63
 Identities = 147/382 (38%), Positives = 220/382 (57%), Gaps = 9/382 (2%)
 Frame = +3

Query: 30   IKEMCLQSWSELPEEIVRLIAEKIDLILDFIRFGAVCQSWRYVTLDKRHFSLFLKPQPWL 209
            I +  +  WS++P++ ++LIAEK+  + D++RFG VC+SW  +  DK       K  PWL
Sbjct: 914  INQTVMADWSKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSIFEDKECCCPSSK-SPWL 972

Query: 210  MLTADDGENNRGFYSVSENKIHRINLPEASGCHCFGSPFGWLVTVGFDQNVHLLNPLSRA 389
            ML   +    RGFYS    K++ I LPE  G  C+GSP+GWLVT+G D ++ LLNPL+R 
Sbjct: 973  MLAEKENSEIRGFYSPLSGKVYEIRLPEVVGKWCWGSPYGWLVTIGTDLDMCLLNPLTRV 1032

Query: 390  RIPLPPLSAVE--DTYYTANLPG-KNRMNYITKAIVSMAPSSSTAEEQILVLIIYGGYKR 560
            +I LP L A    +T   ++  G +++  +I KA++S APSS        V+IIY  Y R
Sbjct: 1033 QILLPSLRACPNLNTLIDSSTQGSRSKDIFIYKAVLSSAPSS----PDCAVMIIYSDYGR 1088

Query: 561  LAFARPGDTTWSIMLNNMIQF-DVLHLNGQFYAVDAYGNVRLCDTNGLRPVSDVFAHPP- 734
            LAF +PG  TW+++ +      D+++ NG F AV+    V +CD +G +  +  FA  P 
Sbjct: 1089 LAFTKPGHQTWTLLESESGPVDDIIYFNGSFLAVNLSWEVWICDISGSQLKTIRFAAAPA 1148

Query: 735  -EDVQGI--DRFYLVELRGELHLVAR-ILDFKPVSPPMEFHHYVKTVYIEVYKLDLCTRK 902
             +DV  I  +  YLVE  GE+++V R + D      P     Y++T    V KLD+C ++
Sbjct: 1149 LQDVDEIEYEAKYLVESGGEIYMVTRNLYDTARRDIP-----YMRTWTFSVLKLDMCNKR 1203

Query: 903  WDELQTLDGHAIFIGSNSSFSLKASGYPGCKPNCIYFTDDFVEASGRLIGLDMGIFSMET 1082
            W+E++ LD  + F+G+N SFS  AS YP  + N IYFTDD+          DMGI++ + 
Sbjct: 1204 WEEVENLDHCSFFLGNNHSFSTWASDYPEFRKNSIYFTDDYCGFLNIPRNFDMGIYNFQN 1263

Query: 1083 EKIDVLYEGDDILSRYAPPTWI 1148
             +I+    G D LS ++ P WI
Sbjct: 1264 TQIEHYPVGHDALSMFSAPLWI 1285


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  207 bits (526), Expect = 7e-51
 Identities = 140/403 (34%), Positives = 213/403 (52%), Gaps = 34/403 (8%)
 Frame = +3

Query: 45   LQSWSELPEEIVRLIAEKIDLILDFIRFGAVCQSWRY-VTLDKRHFSLFLKPQ-PWLMLT 218
            +  WS+LP E++ +I++ + +  D++   AVC +WR+ +     H    L PQ PWLML 
Sbjct: 2    IMDWSQLPPELIEIISKGLTIYSDYLYSRAVCHAWRFSIPKTPNH----LPPQLPWLMLP 57

Query: 219  ADDGENN---RGFYSVSENKIHRINLPEAS--GCHCFGSPFGWLVTVGFDQNVHLLNPLS 383
                ++N   R F+S+S NK H +NLPE S    HC GS  GWL+ +     + L+NPL+
Sbjct: 58   QSQSQSNQSRRAFFSLSTNKFHFLNLPEVSYRKRHC-GSSHGWLMILDDTPTILLINPLT 116

Query: 384  RARIPLPPLSAVEDT-----------YYTANLPGKN--------RMNYITKAIVSMAPSS 506
            RA++ LPPLS+  +            Y   NL G+         R ++I K ++S +P  
Sbjct: 117  RAKLSLPPLSSFPNVISFNYSDIGREYALRNLLGERVTVSLRQMRDSFIRKVVLSSSPLK 176

Query: 507  STAEEQILVLIIYGGYKRLAFARPGDTTWSIMLN-NMIQFDVLHLNGQFYAVDAYGNVRL 683
               +   +V+ I      LA+ R GD +WS++ N      DV+ +NG FYAV+  G + +
Sbjct: 177  ---DNNFVVIAILNQTDDLAYCRNGDKSWSLVENARSFCEDVIFVNGMFYAVNKAGQIVI 233

Query: 684  CDTNGLRPVSDVFAHPPEDVQGIDRFYLVELRGELHLVARILD--FKPVSPPMEFHHYVK 857
            CD +   P       P +   G D  YLV    EL LV R LD  ++   P ME H   +
Sbjct: 234  CDISSDSPRVSFMETPRQ--AGGDMQYLVNSGDELLLVTRYLDLEYEFDHPDMEPHLIYR 291

Query: 858  TVYIEVYKLDLCTRKWDELQTLDGHAIFIGSNSSFSLKASGYPGCKPNCIYFTDDFVEAS 1037
            T+  EV++LD    +W  + TL   A+FIG NSS SL A+ + GC  NCIY+TDD+++A+
Sbjct: 292  TIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDYLDAN 351

Query: 1038 --GRLIGLDMGIFSMETEKIDVL--YEGDDILS-RYAPPTWIT 1151
              G     D+GIF +  E I+ L  Y  +     +++PP W++
Sbjct: 352  YDGHFGDHDLGIFKLCDETIEPLPCYPRNFTSPLQWSPPLWVS 394


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  197 bits (502), Expect = 4e-48
 Identities = 135/395 (34%), Positives = 201/395 (50%), Gaps = 26/395 (6%)
 Frame = +3

Query: 45   LQSWSELPEEIVRLIAEKIDLILDFIRFGAVCQSWRY-VTLDKRHFSLFLKPQPWLMLTA 221
            +  WS+L  E++  IA+K  +  D++RF AVC +WR  V     H    L   PWLML  
Sbjct: 1    MADWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQL---PWLMLPQ 57

Query: 222  DDGEN-NRGFYSVSENKIHRINLPEASGCHCF-GSPFGWLVTVGFDQNVHLLNPLSRARI 395
                + +R F+S+S NK H + LPEAS      GS  GWL+ +     + LLNPL+R+++
Sbjct: 58   SQPHHTHRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKV 117

Query: 396  PLPPLSAVEDTY--------------------YTANLPGKNRMNYITKAIVSMAPSSSTA 515
             LPPLS   +                      YT +L  K R ++I K I+S +P++ + 
Sbjct: 118  HLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLK-KMRDSFIKKTILSSSPANGS- 175

Query: 516  EEQILVLIIYGGYKRLAFARPGDTTWSIMLN-NMIQFDVLHLNGQFYAVDAYGNVRLCDT 692
                + ++I      LA  R  D +W+ + +      DV+   G FYAV+ YG++ +CD 
Sbjct: 176  --DFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSIAVCDV 233

Query: 693  NGLRPVSDVFAHPPEDVQGIDRFYLVELRGELHLVARILDFKPVSPPMEFHHYVKTVYIE 872
            +G  P   +   P +   G D  YLVE   EL LV R LD      P +     +T   +
Sbjct: 234  SGSSPRVSIIEMPQQF--GGDLQYLVESGEELLLVTRYLDLTYDVEPDQTSLIYRTTRFQ 291

Query: 873  VYKLDLCTRKWDELQTLDGHAIFIGSNSSFSLKASGYPGCKPNCIYFTDDFVEASGRLIG 1052
            V +LDL   +W+ + +L   A+F+G N S SL +  +PGCK NCIY+TDD+ E +   IG
Sbjct: 292  VCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIG 351

Query: 1053 --LDMGIFSMETEKIDVLYEGDDILSRYAPPTWIT 1151
               D+GIF++E   I+ L        R+ PP W+T
Sbjct: 352  GEQDLGIFNLEDGSIEPL-PCSHFRIRWPPPLWVT 385


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  192 bits (489), Expect = 1e-46
 Identities = 133/395 (33%), Positives = 199/395 (50%), Gaps = 26/395 (6%)
 Frame = +3

Query: 45   LQSWSELPEEIVRLIAEKIDLILDFIRFGAVCQSWRY-VTLDKRHFSLFLKPQPWLMLTA 221
            +  WS+L  E++  IA+K  +  D++RF AVC +WR  V     H    L   PWLML  
Sbjct: 1    MADWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQL---PWLMLPQ 57

Query: 222  DDGEN-NRGFYSVSENKIHRINLPEASGCHCF-GSPFGWLVTVGFDQNVHLLNPLSRARI 395
                + +R F+S+S NK H + LPEAS      GS  GWL+ +     + LLNPL+R+++
Sbjct: 58   SQPHHTHRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKV 117

Query: 396  PLPPLSAVEDTY--------------------YTANLPGKNRMNYITKAIVSMAPSSSTA 515
             LPPLS   +                      YT +L  K R ++I K I+S +P++ + 
Sbjct: 118  HLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLK-KMRDSFIKKTILSSSPANGS- 175

Query: 516  EEQILVLIIYGGYKRLAFARPGDTTWSIMLN-NMIQFDVLHLNGQFYAVDAYGNVRLCDT 692
                + ++I      LA  R  D +W+ + +      DV+   G FYAV+ YG++ +CD 
Sbjct: 176  --DFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIAVCDV 233

Query: 693  NGLRPVSDVFAHPPEDVQGIDRFYLVELRGELHLVARILDFKPVSPPMEFHHYVKTVYIE 872
            +G  P   +   P +   G D  YLVE   EL LV R LD        +     +T   +
Sbjct: 234  SGSSPRVSIIEMPQQF--GGDLQYLVESGEELLLVTRYLDLTYDVEXDQTSLIYRTTRFQ 291

Query: 873  VYKLDLCTRKWDELQTLDGHAIFIGSNSSFSLKASGYPGCKPNCIYFTDDFVEASGRLIG 1052
            V +LD    +W+ + +L   A+F+G N S SL +  +PGCK NCIY+TDD+ E +   IG
Sbjct: 292  VCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIG 351

Query: 1053 --LDMGIFSMETEKIDVLYEGDDILSRYAPPTWIT 1151
               D+GIF++E   I+ L        R+ PP W+T
Sbjct: 352  GEQDLGIFNLEDGSIEPL-PCSHFRIRWPPPLWVT 385


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  188 bits (478), Expect = 2e-45
 Identities = 132/398 (33%), Positives = 203/398 (51%), Gaps = 32/398 (8%)
 Frame = +3

Query: 54   WSELPEEIVRLIAEKIDLILDFIRFGAVCQSWRY-VTLDKRHFSLFLKPQ-PWLMLTADD 227
            W++LP E++ +I++KI +  D++ F AVC +W+  +     H    L PQ PWL+L    
Sbjct: 5    WTQLPPELIEIISKKITIYSDYLHFQAVCHAWKSSIPKTPNH----LPPQLPWLLLPQSQ 60

Query: 228  GENN--RGFYSVSENKIHRINLPEASGC--HCFGSPFGWLVTVGFDQNVHLLNPLSRARI 395
               +  R F+++S  K H +NLPEAS    HC GS  GWL+ +    ++ ++NPL+R +I
Sbjct: 61   SNQSSYRAFFNLSTYKFHSLNLPEASHRKKHC-GSSHGWLIILDDSPSILVINPLTRRKI 119

Query: 396  PLPPLSAVEDT-----------YYTANLPGKN--------RMNYITKAIVSMAPSSSTAE 518
             LP +S+  +            Y   N  G+         R  +I K ++S +P     +
Sbjct: 120  HLPAISSFPNVVSFDYANVGREYLLVNPQGERNTASLRQMRDGFIKKVVMSSSPLEKKGD 179

Query: 519  EQILVLIIYGGYKRLAFARPGDTTWSIMLNNM-IQFDVLHLNGQFYAVDAYGNVRLCDTN 695
              + + I+      LA+ + GD  W+I+ N+     DV++ NG FYAV+  G + +CD N
Sbjct: 180  FFVAMAILCSTGD-LAYCKNGDECWNIVENSRSFSEDVIYFNGLFYAVNKAGQIVVCDVN 238

Query: 696  GLRPVSDVFAHPPEDVQGIDRFYLVELRGELHLVARILDFKPVSPPMEFHHYV-KTVYIE 872
            G  P    F   P  + G D  YLV     L LV R LD       +EF  ++ KT   E
Sbjct: 239  GNSPKVS-FIETPRQIGG-DMQYLVSSGDGLLLVTRYLDLD-----VEFDIFIYKTARFE 291

Query: 873  VYKLDLCTRKWDELQTLDGHAIFIGSNSSFSLKASGYPGCKPNCIYFTDDFV--EASGRL 1046
            V+KLDL   +W+ + +L    +FIG NSS +L ASG  GC  +CIY+TDD+      G +
Sbjct: 292  VFKLDLNGPRWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYSANNYDGHI 351

Query: 1047 IGLDMGIFSMETEKIDVL--YEGDDILS-RYAPPTWIT 1151
               D+GIF +    I+ L  Y  +     ++ PP WI+
Sbjct: 352  GEHDLGIFKLSDGSIEPLPCYPRNSYSRLQWPPPLWIS 389