BLASTX nr result
ID: Coptis25_contig00019975
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00019975 (586 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002266482.1| PREDICTED: general transcription factor IIH ... 117 1e-24 ref|XP_002329886.1| predicted protein [Populus trichocarpa] gi|2... 114 2e-23 ref|XP_004147953.1| PREDICTED: general transcription factor IIH ... 111 1e-22 gb|AAF79634.1|AC025416_8 F5O11.12 [Arabidopsis thaliana] 110 1e-22 ref|XP_003566711.1| PREDICTED: xylem cysteine proteinase 1-like ... 110 2e-22 >ref|XP_002266482.1| PREDICTED: general transcription factor IIH subunit 5 [Vitis vinifera] gi|297742669|emb|CBI34818.3| unnamed protein product [Vitis vinifera] Length = 70 Score = 117 bits (294), Expect = 1e-24 Identities = 57/70 (81%), Positives = 64/70 (91%) Frame = -3 Query: 368 MVNATKGLVISSDIPMVQFIINYNSSLPASQRFILHVLDNTHLFVLPNVGEMIRSAISEF 189 MVNATKGL IS DIPM QFIIN N+S+PASQ+FI+HVLD+THLFV P+V EMIRSAISEF Sbjct: 1 MVNATKGLFISCDIPMAQFIINMNASMPASQKFIIHVLDSTHLFVQPHVAEMIRSAISEF 60 Query: 188 RDQNSYEKPA 159 R+QNSYEKPA Sbjct: 61 REQNSYEKPA 70 >ref|XP_002329886.1| predicted protein [Populus trichocarpa] gi|222871123|gb|EEF08254.1| predicted protein [Populus trichocarpa] Length = 70 Score = 114 bits (284), Expect = 2e-23 Identities = 53/70 (75%), Positives = 64/70 (91%) Frame = -3 Query: 368 MVNATKGLVISSDIPMVQFIINYNSSLPASQRFILHVLDNTHLFVLPNVGEMIRSAISEF 189 MVNATKGL IS DIPM QFIIN N+SLPASQ+FI+H+LD+TH+FV P+V +MIRSAIS+F Sbjct: 1 MVNATKGLFISCDIPMAQFIINLNASLPASQKFIIHILDSTHMFVQPHVSDMIRSAISDF 60 Query: 188 RDQNSYEKPA 159 R+QNSYEKP+ Sbjct: 61 REQNSYEKPS 70 >ref|XP_004147953.1| PREDICTED: general transcription factor IIH subunit 5-like [Cucumis sativus] gi|449494289|ref|XP_004159503.1| PREDICTED: general transcription factor IIH subunit 5-like [Cucumis sativus] Length = 70 Score = 111 bits (277), Expect = 1e-22 Identities = 52/69 (75%), Positives = 61/69 (88%) Frame = -3 Query: 368 MVNATKGLVISSDIPMVQFIINYNSSLPASQRFILHVLDNTHLFVLPNVGEMIRSAISEF 189 MVNA KG+ IS DIPM QFIINYN+SLPAS RFI+H+LDNTH+FV P+V +MIR+AISEF Sbjct: 1 MVNAIKGMFISCDIPMAQFIINYNASLPASHRFIIHILDNTHMFVQPHVADMIRNAISEF 60 Query: 188 RDQNSYEKP 162 R+Q SYEKP Sbjct: 61 REQISYEKP 69 >gb|AAF79634.1|AC025416_8 F5O11.12 [Arabidopsis thaliana] Length = 113 Score = 110 bits (276), Expect = 1e-22 Identities = 51/73 (69%), Positives = 64/73 (87%) Frame = -3 Query: 380 RVYIMVNATKGLVISSDIPMVQFIINYNSSLPASQRFILHVLDNTHLFVLPNVGEMIRSA 201 +V +MVNA KG+ +S DIPM QFI+N N+S+P SQ+FI+HVLD+THLFV P+V +MIRSA Sbjct: 39 QVLLMVNAIKGVFVSCDIPMTQFIVNMNNSMPPSQKFIIHVLDSTHLFVQPHVEQMIRSA 98 Query: 200 ISEFRDQNSYEKP 162 IS+FRDQNSYEKP Sbjct: 99 ISDFRDQNSYEKP 111 >ref|XP_003566711.1| PREDICTED: xylem cysteine proteinase 1-like [Brachypodium distachyon] Length = 457 Score = 110 bits (275), Expect = 2e-22 Identities = 51/77 (66%), Positives = 64/77 (83%) Frame = -3 Query: 368 MVNATKGLVISSDIPMVQFIINYNSSLPASQRFILHVLDNTHLFVLPNVGEMIRSAISEF 189 MVNA KGL IS D+PM QFI+N N+S+PAS++FI+H+LD TH+FV P+VGEMIRS I+EF Sbjct: 1 MVNAIKGLFISCDVPMAQFIVNLNASMPASEKFIVHMLDPTHMFVQPHVGEMIRSKIAEF 60 Query: 188 RDQNSYEKPA*LHAVEV 138 RDQNSYEKP + E+ Sbjct: 61 RDQNSYEKPTSIAQTEI 77