BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019975
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266482.1| PREDICTED: general transcription factor IIH ...   117   1e-24
ref|XP_002329886.1| predicted protein [Populus trichocarpa] gi|2...   114   2e-23
ref|XP_004147953.1| PREDICTED: general transcription factor IIH ...   111   1e-22
gb|AAF79634.1|AC025416_8 F5O11.12 [Arabidopsis thaliana]              110   1e-22
ref|XP_003566711.1| PREDICTED: xylem cysteine proteinase 1-like ...   110   2e-22

>ref|XP_002266482.1| PREDICTED: general transcription factor IIH subunit 5 [Vitis
           vinifera] gi|297742669|emb|CBI34818.3| unnamed protein
           product [Vitis vinifera]
          Length = 70

 Score =  117 bits (294), Expect = 1e-24
 Identities = 57/70 (81%), Positives = 64/70 (91%)
 Frame = -3

Query: 368 MVNATKGLVISSDIPMVQFIINYNSSLPASQRFILHVLDNTHLFVLPNVGEMIRSAISEF 189
           MVNATKGL IS DIPM QFIIN N+S+PASQ+FI+HVLD+THLFV P+V EMIRSAISEF
Sbjct: 1   MVNATKGLFISCDIPMAQFIINMNASMPASQKFIIHVLDSTHLFVQPHVAEMIRSAISEF 60

Query: 188 RDQNSYEKPA 159
           R+QNSYEKPA
Sbjct: 61  REQNSYEKPA 70


>ref|XP_002329886.1| predicted protein [Populus trichocarpa] gi|222871123|gb|EEF08254.1|
           predicted protein [Populus trichocarpa]
          Length = 70

 Score =  114 bits (284), Expect = 2e-23
 Identities = 53/70 (75%), Positives = 64/70 (91%)
 Frame = -3

Query: 368 MVNATKGLVISSDIPMVQFIINYNSSLPASQRFILHVLDNTHLFVLPNVGEMIRSAISEF 189
           MVNATKGL IS DIPM QFIIN N+SLPASQ+FI+H+LD+TH+FV P+V +MIRSAIS+F
Sbjct: 1   MVNATKGLFISCDIPMAQFIINLNASLPASQKFIIHILDSTHMFVQPHVSDMIRSAISDF 60

Query: 188 RDQNSYEKPA 159
           R+QNSYEKP+
Sbjct: 61  REQNSYEKPS 70


>ref|XP_004147953.1| PREDICTED: general transcription factor IIH subunit 5-like [Cucumis
           sativus] gi|449494289|ref|XP_004159503.1| PREDICTED:
           general transcription factor IIH subunit 5-like [Cucumis
           sativus]
          Length = 70

 Score =  111 bits (277), Expect = 1e-22
 Identities = 52/69 (75%), Positives = 61/69 (88%)
 Frame = -3

Query: 368 MVNATKGLVISSDIPMVQFIINYNSSLPASQRFILHVLDNTHLFVLPNVGEMIRSAISEF 189
           MVNA KG+ IS DIPM QFIINYN+SLPAS RFI+H+LDNTH+FV P+V +MIR+AISEF
Sbjct: 1   MVNAIKGMFISCDIPMAQFIINYNASLPASHRFIIHILDNTHMFVQPHVADMIRNAISEF 60

Query: 188 RDQNSYEKP 162
           R+Q SYEKP
Sbjct: 61  REQISYEKP 69


>gb|AAF79634.1|AC025416_8 F5O11.12 [Arabidopsis thaliana]
          Length = 113

 Score =  110 bits (276), Expect = 1e-22
 Identities = 51/73 (69%), Positives = 64/73 (87%)
 Frame = -3

Query: 380 RVYIMVNATKGLVISSDIPMVQFIINYNSSLPASQRFILHVLDNTHLFVLPNVGEMIRSA 201
           +V +MVNA KG+ +S DIPM QFI+N N+S+P SQ+FI+HVLD+THLFV P+V +MIRSA
Sbjct: 39  QVLLMVNAIKGVFVSCDIPMTQFIVNMNNSMPPSQKFIIHVLDSTHLFVQPHVEQMIRSA 98

Query: 200 ISEFRDQNSYEKP 162
           IS+FRDQNSYEKP
Sbjct: 99  ISDFRDQNSYEKP 111


>ref|XP_003566711.1| PREDICTED: xylem cysteine proteinase 1-like [Brachypodium
           distachyon]
          Length = 457

 Score =  110 bits (275), Expect = 2e-22
 Identities = 51/77 (66%), Positives = 64/77 (83%)
 Frame = -3

Query: 368 MVNATKGLVISSDIPMVQFIINYNSSLPASQRFILHVLDNTHLFVLPNVGEMIRSAISEF 189
           MVNA KGL IS D+PM QFI+N N+S+PAS++FI+H+LD TH+FV P+VGEMIRS I+EF
Sbjct: 1   MVNAIKGLFISCDVPMAQFIVNLNASMPASEKFIVHMLDPTHMFVQPHVGEMIRSKIAEF 60

Query: 188 RDQNSYEKPA*LHAVEV 138
           RDQNSYEKP  +   E+
Sbjct: 61  RDQNSYEKPTSIAQTEI 77