BLASTX nr result

ID: Coptis25_contig00019967 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019967
         (809 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523824.1| conserved hypothetical protein [Ricinus comm...   260   3e-67
ref|XP_004140159.1| PREDICTED: uncharacterized protein LOC101218...   251   1e-64
ref|XP_003538110.1| PREDICTED: uncharacterized protein LOC100782...   248   1e-63
ref|XP_002299780.1| predicted protein [Populus trichocarpa] gi|2...   243   5e-62
ref|XP_002274717.1| PREDICTED: uncharacterized protein LOC100265...   243   5e-62

>ref|XP_002523824.1| conserved hypothetical protein [Ricinus communis]
           gi|223536912|gb|EEF38550.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 184

 Score =  260 bits (664), Expect = 3e-67
 Identities = 125/180 (69%), Positives = 148/180 (82%)
 Frame = +2

Query: 173 RKVNWNWVSAIVGXXXXXXXXXIIYAKPKDPTFHVISISLTSFKLSIPVLDADFILTVHV 352
           +KV W+W SA++G         ++ AKPKDPTFH+ISIS TSFKL++PVLDAD +LTVHV
Sbjct: 4   KKVKWSWSSALIGAASATAVTALLNAKPKDPTFHLISISFTSFKLNLPVLDADLLLTVHV 63

Query: 353 TNPNIVPINYSPTTMSIFYDGSLLGSALVEAGSQPAKSCQVIKLAGRLSGLELAHHAKKF 532
           TNPNI  I+YS T+MSIFYDGSLLGSA VEAGSQPA+SC++++L  RL GL+LAHHA KF
Sbjct: 64  TNPNITSIHYSSTSMSIFYDGSLLGSAQVEAGSQPARSCKLLRLQARLDGLQLAHHASKF 123

Query: 533 LADVAKREMELDAAVDIQGTAKVLCWSHGFKVHVDSHIVVDPVFLDVIEQENKSQLQLFV 712
            +DVAKR+M LDA VDI+G AKVL W H FKVHVDSH  VDPVFLDVI+QENKSQL +FV
Sbjct: 124 FSDVAKRQMLLDAKVDIEGAAKVLWWDHKFKVHVDSHTTVDPVFLDVIDQENKSQLDVFV 183


>ref|XP_004140159.1| PREDICTED: uncharacterized protein LOC101218134 [Cucumis sativus]
           gi|449481051|ref|XP_004156067.1| PREDICTED:
           uncharacterized LOC101218134 [Cucumis sativus]
          Length = 183

 Score =  251 bits (641), Expect = 1e-64
 Identities = 121/183 (66%), Positives = 146/183 (79%)
 Frame = +2

Query: 167 MDRKVNWNWVSAIVGXXXXXXXXXIIYAKPKDPTFHVISISLTSFKLSIPVLDADFILTV 346
           M +K NW+W SA+VG         II AKPKDPTFH+ISI  TSFKL  PV+D + ILTV
Sbjct: 1   MGKKRNWSWTSALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTV 60

Query: 347 HVTNPNIVPINYSPTTMSIFYDGSLLGSALVEAGSQPAKSCQVIKLAGRLSGLELAHHAK 526
           HVTNPN+ PI+YS T MSIFY+GSLLGSA V+AGSQ  +SCQV++L  RL GL+LAHH  
Sbjct: 61  HVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGS 120

Query: 527 KFLADVAKREMELDAAVDIQGTAKVLCWSHGFKVHVDSHIVVDPVFLDVIEQENKSQLQL 706
           +F++DVAKREM LDA+VDI G A+VL WSH FKVHVDSH+ VDPVFLDV++QEN SQL+L
Sbjct: 121 RFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLEL 180

Query: 707 FVD 715
           F++
Sbjct: 181 FLN 183


>ref|XP_003538110.1| PREDICTED: uncharacterized protein LOC100782945 [Glycine max]
          Length = 191

 Score =  248 bits (632), Expect = 1e-63
 Identities = 118/180 (65%), Positives = 145/180 (80%)
 Frame = +2

Query: 170 DRKVNWNWVSAIVGXXXXXXXXXIIYAKPKDPTFHVISISLTSFKLSIPVLDADFILTVH 349
           ++K  W+W SAI+G         +I AKPKDPTFH+ISI+ TS KL+ P+LDA+ +LTVH
Sbjct: 3   NKKSKWSWSSAIIGAASAVAASALISAKPKDPTFHLISINFTSLKLNFPLLDAEVLLTVH 62

Query: 350 VTNPNIVPINYSPTTMSIFYDGSLLGSALVEAGSQPAKSCQVIKLAGRLSGLELAHHAKK 529
           VTNPNI PI+YS T+MSIFY GSLLGSA V+AGSQP +SCQ+++L  RL  LELAHHA +
Sbjct: 63  VTNPNIAPIHYSSTSMSIFYQGSLLGSAQVQAGSQPPRSCQLLRLPARLHALELAHHATR 122

Query: 530 FLADVAKREMELDAAVDIQGTAKVLCWSHGFKVHVDSHIVVDPVFLDVIEQENKSQLQLF 709
           FL DVA+REM LDAAVDI GTA+V+ W H FKVHVDSH+ VDPVFLDVI+QEN S+L++F
Sbjct: 123 FLHDVARREMFLDAAVDIAGTARVMWWDHNFKVHVDSHVTVDPVFLDVIDQENTSELEVF 182


>ref|XP_002299780.1| predicted protein [Populus trichocarpa] gi|222847038|gb|EEE84585.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score =  243 bits (619), Expect = 5e-62
 Identities = 117/183 (63%), Positives = 145/183 (79%), Gaps = 1/183 (0%)
 Frame = +2

Query: 167 MDRKVNWNWVSAIVGXXXXXXXXXIIYAKPKDPTFHVISISLTSFKLSIPVLDADFILTV 346
           M +KV W+W +A+VG         +I AKPKDPTFH+I I+ TSFKL  PV+D D ILTV
Sbjct: 1   MGKKVKWSWTAALVGAASATAAVALISAKPKDPTFHLIKINFTSFKLRFPVIDTDVILTV 60

Query: 347 HVTNPNIVPINYSPTTMSIFYDGSLLGSALVEAGSQPAKSCQVIKLAGRLSGLEL-AHHA 523
           HVTNPNI+PI+YS T MSIFYDGSL+GSA VEAGSQ ++SCQ+++L  RL G+EL A+H+
Sbjct: 61  HVTNPNIIPIHYSSTIMSIFYDGSLIGSAQVEAGSQRSRSCQILELTARLDGVELMANHS 120

Query: 524 KKFLADVAKREMELDAAVDIQGTAKVLCWSHGFKVHVDSHIVVDPVFLDVIEQENKSQLQ 703
            KF +DVAKREM LDA VDI GTA++L W H F VHVDSHI VDP+FLD+I+QENKS+L 
Sbjct: 121 VKFFSDVAKREMVLDAKVDIGGTARLLWWGHRFNVHVDSHITVDPLFLDIIDQENKSRLD 180

Query: 704 LFV 712
           +F+
Sbjct: 181 VFL 183


>ref|XP_002274717.1| PREDICTED: uncharacterized protein LOC100265664 [Vitis vinifera]
           gi|296084897|emb|CBI28306.3| unnamed protein product
           [Vitis vinifera]
          Length = 184

 Score =  243 bits (619), Expect = 5e-62
 Identities = 119/181 (65%), Positives = 141/181 (77%), Gaps = 1/181 (0%)
 Frame = +2

Query: 167 MDRKVNWNWVSAIVGXXXXXXXXXIIYAKPKDPTFHVISISLTSFKLSIPVLDADFILTV 346
           M + V W+W SA++G         +I AKPKDP FH+ISISLTSFK + PVLDA+ ILTV
Sbjct: 1   MGKTVKWSWTSALIGAASATAAAALINAKPKDPAFHLISISLTSFKFNFPVLDAEVILTV 60

Query: 347 HVTNPNIVPINYSPTTMSIFYDGSLLGSALVEAGSQPAKSCQVIKLAGRLSGLE-LAHHA 523
           HVTNPNI PI+YS T MSIFYDGS LGSA ++AGSQ  KSCQV++L  RL GLE L  HA
Sbjct: 61  HVTNPNIAPIHYSSTAMSIFYDGSHLGSAQIDAGSQAPKSCQVLRLPARLDGLELLTQHA 120

Query: 524 KKFLADVAKREMELDAAVDIQGTAKVLCWSHGFKVHVDSHIVVDPVFLDVIEQENKSQLQ 703
            +FLAD+ +REM LDA VDI+G AKVL W H FKVHVDSH+VVDP++LDVI+QENKS L+
Sbjct: 121 GRFLADIRRREMTLDATVDIEGAAKVLWWDHKFKVHVDSHVVVDPLYLDVIDQENKSDLE 180

Query: 704 L 706
           L
Sbjct: 181 L 181


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