BLASTX nr result

ID: Coptis25_contig00019964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019964
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN40106.1| unknown [Picea sitchensis]                              67   1e-17
gb|AFG63213.1| Pinus taeda anonymous locus 0_1803_01 genomic seq...    63   1e-15
gb|AFG63219.1| Pinus taeda anonymous locus 0_1803_01 genomic seq...    63   2e-15
gb|ACN40806.1| unknown [Picea sitchensis]                              67   1e-09
ref|XP_003572155.1| PREDICTED: clavaminate synthase-like protein...    62   3e-09

>gb|ACN40106.1| unknown [Picea sitchensis]
          Length = 235

 Score = 67.4 bits (163), Expect(2) = 1e-17
 Identities = 27/48 (56%), Positives = 39/48 (81%)
 Frame = +1

Query: 277 ETYMKILNEIGVDIRWHKGDVLLVDNLSTMHARRPGKPPRQILVSICK 420
           + +  ILNE  VD++W +GDVLL+DN++  HARRP KPPR+IL+++CK
Sbjct: 188 DAFKAILNEECVDLKWEEGDVLLLDNMAVQHARRPSKPPRRILIAMCK 235



 Score = 47.0 bits (110), Expect(2) = 1e-17
 Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 8/58 (13%)
 Frame = +3

Query: 42  CSSIELMENGSTKVTFGPLEPIRTLQ---GKRLWTYNIRGYG-----QKPQLGDGSPI 191
           CSS E  E+GS +  FGP+E IR  +   G+++W  NI GYG     Q   LGDG  I
Sbjct: 125 CSSFECYEDGSAEFVFGPMEAIRAFEGYGGRQVWFNNIVGYGGKNRNQSLSLGDGCGI 182


>gb|AFG63213.1| Pinus taeda anonymous locus 0_1803_01 genomic sequence
           gi|383161261|gb|AFG63214.1| Pinus taeda anonymous locus
           0_1803_01 genomic sequence gi|383161263|gb|AFG63215.1|
           Pinus taeda anonymous locus 0_1803_01 genomic sequence
           gi|383161265|gb|AFG63216.1| Pinus taeda anonymous locus
           0_1803_01 genomic sequence gi|383161267|gb|AFG63217.1|
           Pinus taeda anonymous locus 0_1803_01 genomic sequence
           gi|383161269|gb|AFG63218.1| Pinus taeda anonymous locus
           0_1803_01 genomic sequence gi|383161273|gb|AFG63220.1|
           Pinus taeda anonymous locus 0_1803_01 genomic sequence
           gi|383161275|gb|AFG63221.1| Pinus taeda anonymous locus
           0_1803_01 genomic sequence gi|383161277|gb|AFG63222.1|
           Pinus taeda anonymous locus 0_1803_01 genomic sequence
           gi|383161279|gb|AFG63223.1| Pinus taeda anonymous locus
           0_1803_01 genomic sequence gi|383161281|gb|AFG63224.1|
           Pinus taeda anonymous locus 0_1803_01 genomic sequence
           gi|383161283|gb|AFG63225.1| Pinus taeda anonymous locus
           0_1803_01 genomic sequence gi|383161285|gb|AFG63226.1|
           Pinus taeda anonymous locus 0_1803_01 genomic sequence
          Length = 119

 Score = 63.2 bits (152), Expect(2) = 1e-15
 Identities = 24/48 (50%), Positives = 38/48 (79%)
 Frame = +1

Query: 277 ETYMKILNEIGVDIRWHKGDVLLVDNLSTMHARRPGKPPRQILVSICK 420
           + +  ++NE  V+++W  GDVLL+DN++  HARRP KPPR+IL+++CK
Sbjct: 72  DAFKTVVNEECVNLKWEAGDVLLLDNMAVQHARRPSKPPRRILIAMCK 119



 Score = 44.7 bits (104), Expect(2) = 1e-15
 Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 8/58 (13%)
 Frame = +3

Query: 42  CSSIELMENGSTKVTFGPLEPIRTLQ---GKRLWTYNIRGYG-----QKPQLGDGSPI 191
           CSS E  E+GS +  FGP+E IR+     G+ +W  NI GYG     Q   +GDG  I
Sbjct: 9   CSSFECYEDGSAEFVFGPMEAIRSFDGYGGRPVWFNNIVGYGGGNRNQSLSMGDGCGI 66


>gb|AFG63219.1| Pinus taeda anonymous locus 0_1803_01 genomic sequence
          Length = 119

 Score = 63.2 bits (152), Expect(2) = 2e-15
 Identities = 24/48 (50%), Positives = 38/48 (79%)
 Frame = +1

Query: 277 ETYMKILNEIGVDIRWHKGDVLLVDNLSTMHARRPGKPPRQILVSICK 420
           + +  ++NE  V+++W  GDVLL+DN++  HARRP KPPR+IL+++CK
Sbjct: 72  DAFKTVVNEECVNLKWEAGDVLLLDNMAVQHARRPSKPPRRILIAMCK 119



 Score = 44.3 bits (103), Expect(2) = 2e-15
 Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 8/55 (14%)
 Frame = +3

Query: 42  CSSIELMENGSTKVTFGPLEPIRTLQ---GKRLWTYNIRGYG-----QKPQLGDG 182
           CSS E  E+GS +  FGP+E IR+     G+ +W  NI GYG     Q   +GDG
Sbjct: 9   CSSFECYEDGSAEFVFGPMEAIRSFDGYGGRPVWFNNIVGYGGGNRNQSLSMGDG 63


>gb|ACN40806.1| unknown [Picea sitchensis]
          Length = 332

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 27/50 (54%), Positives = 39/50 (78%)
 Frame = +1

Query: 271 VSETYMKILNEIGVDIRWHKGDVLLVDNLSTMHARRPGKPPRQILVSICK 420
           + E   +++N   V+++W  GDVLL+DNL+ MHARRP KPPR++LVS+CK
Sbjct: 283 IIEESARVMNNECVEVKWEAGDVLLIDNLAVMHARRPSKPPRRVLVSMCK 332


>ref|XP_003572155.1| PREDICTED: clavaminate synthase-like protein At3g21360-like
           [Brachypodium distachyon]
          Length = 340

 Score = 62.0 bits (149), Expect(2) = 3e-09
 Identities = 25/46 (54%), Positives = 35/46 (76%)
 Frame = +1

Query: 289 KILNEIGVDIRWHKGDVLLVDNLSTMHARRPGKPPRQILVSICK*T 426
           +I+ E  +  RW KGDVL++DNL+T+H RRP  PPR++LV+ CK T
Sbjct: 291 EIIEEESIQFRWEKGDVLILDNLATLHGRRPSLPPRRVLVATCKVT 336



 Score = 23.9 bits (50), Expect(2) = 3e-09
 Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 7/52 (13%)
 Frame = +3

Query: 57  LMENGSTKVTFGPLEPIRTL---QGKRLWTYNIRGYGQK----PQLGDGSPI 191
           L ENG  +   GP +  R     +G+R+W   + G   K        DGS I
Sbjct: 230 LPENGGVRTILGPRKLTRVFPGRKGRRMWFNTVVGMHGKELSSAAFADGSEI 281


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