BLASTX nr result

ID: Coptis25_contig00019940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019940
         (669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273113.2| PREDICTED: uncharacterized membrane protein ...   170   3e-40
ref|XP_002513660.1| conserved hypothetical protein [Ricinus comm...   166   3e-39
emb|CBI22668.3| unnamed protein product [Vitis vinifera]              164   1e-38
ref|XP_002272875.1| PREDICTED: uncharacterized membrane protein ...   164   1e-38
emb|CAN74772.1| hypothetical protein VITISV_024875 [Vitis vinifera]   163   3e-38

>ref|XP_002273113.2| PREDICTED: uncharacterized membrane protein yjcL-like [Vitis
           vinifera] gi|302143806|emb|CBI22667.3| unnamed protein
           product [Vitis vinifera]
          Length = 449

 Score =  170 bits (430), Expect = 3e-40
 Identities = 95/172 (55%), Positives = 117/172 (68%), Gaps = 1/172 (0%)
 Frame = -1

Query: 513 KHKTVFYPFTTSKTK-SYPSVKVKAQLNFPLIPPQDHWGTFSVLFATAAFGIXXXXXXXX 337
           K +T   P    K+  S  SV V++ L FP+I PQD WGT++ LFAT AFGI        
Sbjct: 45  KKQTQLSPLIFPKSSDSIRSVTVRSSLTFPIISPQDQWGTWTALFATGAFGIW------- 97

Query: 336 XXXXXXXXXXXXXXXXXSDTTKIGCTVSGAVVSTLGGLAASNLGIISNEAPAYSVVMEYL 157
                            S+ TKIG  +SGA+VSTL GLAASNLGIIS EAPAYSVV+ +L
Sbjct: 98  -----------------SEKTKIGSALSGALVSTLVGLAASNLGIISCEAPAYSVVLNFL 140

Query: 156 LPITIPLLLFKADLGRVVQSTGKMLLAFLLGSVATIIGTIVAYRLVPMRSLG 1
           LP+ +PLLLF+ADL RV+QSTG +L+AFL+GSVAT IGT+VA+ +VPMRSLG
Sbjct: 141 LPLAVPLLLFRADLRRVIQSTGALLMAFLIGSVATTIGTVVAFLMVPMRSLG 192


>ref|XP_002513660.1| conserved hypothetical protein [Ricinus communis]
            gi|223547568|gb|EEF49063.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 965

 Score =  166 bits (421), Expect = 3e-39
 Identities = 92/172 (53%), Positives = 115/172 (66%), Gaps = 2/172 (1%)
 Frame = -1

Query: 510  HKTVFYPFTTS--KTKSYPSVKVKAQLNFPLIPPQDHWGTFSVLFATAAFGIXXXXXXXX 337
            ++  F P T S   T     +K+++QL FPLI P DHWGT++ LFAT AFGI        
Sbjct: 561  NEAAFSPSTISLNNTSLIRQIKLRSQLRFPLISPDDHWGTWTALFATGAFGIW------- 613

Query: 336  XXXXXXXXXXXXXXXXXSDTTKIGCTVSGAVVSTLGGLAASNLGIISNEAPAYSVVMEYL 157
                             S+ TK+G  VS A+VSTL GLAASN+GII  E  AYS+V+E+L
Sbjct: 614  -----------------SEGTKVGSMVSAALVSTLVGLAASNIGIIPYETAAYSLVLEFL 656

Query: 156  LPITIPLLLFKADLGRVVQSTGKMLLAFLLGSVATIIGTIVAYRLVPMRSLG 1
            LP+T+PLLLF+ADL  V++STGK+ LAFLLGSVATIIGT VA+ +VPMRSLG
Sbjct: 657  LPLTVPLLLFRADLRNVIRSTGKLFLAFLLGSVATIIGTTVAFLMVPMRSLG 708



 Score =  164 bits (415), Expect = 1e-38
 Identities = 88/153 (57%), Positives = 109/153 (71%)
 Frame = -1

Query: 459 SVKVKAQLNFPLIPPQDHWGTFSVLFATAAFGIXXXXXXXXXXXXXXXXXXXXXXXXXSD 280
           S+ V++ LNFPLI   D WGT++ LFAT AFGI                         S+
Sbjct: 77  SLAVRSNLNFPLISSNDRWGTWTALFATGAFGIW------------------------SE 112

Query: 279 TTKIGCTVSGAVVSTLGGLAASNLGIISNEAPAYSVVMEYLLPITIPLLLFKADLGRVVQ 100
            TKIG  +SGA+VSTL GLA SNLGIIS E+PAY+VV+E+LLP+ +PLLLF+ADL RV++
Sbjct: 113 KTKIGSALSGALVSTLVGLAGSNLGIISCESPAYAVVLEFLLPLAVPLLLFRADLRRVIR 172

Query: 99  STGKMLLAFLLGSVATIIGTIVAYRLVPMRSLG 1
           STG +LLAFLLGSVAT +GT+VAY +VPMRSLG
Sbjct: 173 STGTLLLAFLLGSVATTVGTVVAYWIVPMRSLG 205


>emb|CBI22668.3| unnamed protein product [Vitis vinifera]
          Length = 1178

 Score =  164 bits (416), Expect = 1e-38
 Identities = 88/152 (57%), Positives = 111/152 (73%)
 Frame = -1

Query: 456 VKVKAQLNFPLIPPQDHWGTFSVLFATAAFGIXXXXXXXXXXXXXXXXXXXXXXXXXSDT 277
           VKV++QL+ P+I P+DHWGT++ LFAT AFG+                         S+ 
Sbjct: 58  VKVRSQLSGPIISPEDHWGTWTALFATGAFGLW------------------------SEK 93

Query: 276 TKIGCTVSGAVVSTLGGLAASNLGIISNEAPAYSVVMEYLLPITIPLLLFKADLGRVVQS 97
           TKIG  VS A+VS L G+AASNLGII  +APAYS+VME+LLPIT+PLLLF+AD+ +V+QS
Sbjct: 94  TKIGSMVSAALVSILVGMAASNLGIIPYDAPAYSIVMEFLLPITLPLLLFRADMRQVMQS 153

Query: 96  TGKMLLAFLLGSVATIIGTIVAYRLVPMRSLG 1
           TG +LLAFLLGSVATI GT+VA+ +VPMRSLG
Sbjct: 154 TGTLLLAFLLGSVATIAGTLVAFLVVPMRSLG 185


>ref|XP_002272875.1| PREDICTED: uncharacterized membrane protein yjcL [Vitis vinifera]
          Length = 494

 Score =  164 bits (416), Expect = 1e-38
 Identities = 88/152 (57%), Positives = 111/152 (73%)
 Frame = -1

Query: 456 VKVKAQLNFPLIPPQDHWGTFSVLFATAAFGIXXXXXXXXXXXXXXXXXXXXXXXXXSDT 277
           VKV++QL+ P+I P+DHWGT++ LFAT AFG+                         S+ 
Sbjct: 110 VKVRSQLSGPIISPEDHWGTWTALFATGAFGLW------------------------SEK 145

Query: 276 TKIGCTVSGAVVSTLGGLAASNLGIISNEAPAYSVVMEYLLPITIPLLLFKADLGRVVQS 97
           TKIG  VS A+VS L G+AASNLGII  +APAYS+VME+LLPIT+PLLLF+AD+ +V+QS
Sbjct: 146 TKIGSMVSAALVSILVGMAASNLGIIPYDAPAYSIVMEFLLPITLPLLLFRADMRQVMQS 205

Query: 96  TGKMLLAFLLGSVATIIGTIVAYRLVPMRSLG 1
           TG +LLAFLLGSVATI GT+VA+ +VPMRSLG
Sbjct: 206 TGTLLLAFLLGSVATIAGTLVAFLVVPMRSLG 237


>emb|CAN74772.1| hypothetical protein VITISV_024875 [Vitis vinifera]
          Length = 1230

 Score =  163 bits (412), Expect = 3e-38
 Identities = 88/152 (57%), Positives = 109/152 (71%)
 Frame = -1

Query: 456 VKVKAQLNFPLIPPQDHWGTFSVLFATAAFGIXXXXXXXXXXXXXXXXXXXXXXXXXSDT 277
           VKV++QL+ P I P DHWGT++ LFAT AFG+                         S+ 
Sbjct: 110 VKVRSQLSGPFISPDDHWGTWTALFATGAFGLW------------------------SEK 145

Query: 276 TKIGCTVSGAVVSTLGGLAASNLGIISNEAPAYSVVMEYLLPITIPLLLFKADLGRVVQS 97
           TKIG  VS A+VS L G+AASNLGII  +APAYS+VME+LLPIT+PLLLF+AD+ +V+QS
Sbjct: 146 TKIGSMVSAALVSILVGMAASNLGIIPYDAPAYSIVMEFLLPITLPLLLFRADMRQVMQS 205

Query: 96  TGKMLLAFLLGSVATIIGTIVAYRLVPMRSLG 1
           TG +LLAFLLGSVATI GT+VA+ +VPMRSLG
Sbjct: 206 TGTLLLAFLLGSVATIAGTLVAFLVVPMRSLG 237


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