BLASTX nr result

ID: Coptis25_contig00019926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019926
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533513.1| PREDICTED: autophagy-related protein 3-like ...    83   2e-14
gb|AFK34948.1| unknown [Medicago truncatula]                           80   1e-13
dbj|BAI22685.1| autophagy protein ATG3 [Glycine max]                   80   1e-13
ref|NP_001241390.1| autophagy-related protein 3-like [Glycine ma...    80   1e-13
gb|ACJ84826.1| unknown [Medicago truncatula] gi|388518803|gb|AFK...    80   1e-13

>ref|XP_003533513.1| PREDICTED: autophagy-related protein 3-like [Glycine max]
          Length = 272

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 39/39 (100%), Positives = 39/39 (100%)
 Frame = +1

Query: 1   GVEPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLGSSSH 117
           GVEPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLGSSSH
Sbjct: 234 GVEPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLGSSSH 272


>gb|AFK34948.1| unknown [Medicago truncatula]
          Length = 310

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 38/39 (97%), Positives = 39/39 (100%)
 Frame = +1

Query: 1   GVEPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLGSSSH 117
           GVEPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLGSSS+
Sbjct: 272 GVEPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLGSSSN 310


>dbj|BAI22685.1| autophagy protein ATG3 [Glycine max]
          Length = 313

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 38/39 (97%), Positives = 39/39 (100%)
 Frame = +1

Query: 1   GVEPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLGSSSH 117
           GVEPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLGSSS+
Sbjct: 275 GVEPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLGSSSN 313


>ref|NP_001241390.1| autophagy-related protein 3-like [Glycine max]
           gi|255645508|gb|ACU23249.1| unknown [Glycine max]
           gi|255647436|gb|ACU24182.1| unknown [Glycine max]
          Length = 313

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 38/39 (97%), Positives = 39/39 (100%)
 Frame = +1

Query: 1   GVEPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLGSSSH 117
           GVEPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLGSSS+
Sbjct: 275 GVEPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLGSSSN 313


>gb|ACJ84826.1| unknown [Medicago truncatula] gi|388518803|gb|AFK47463.1| unknown
           [Medicago truncatula]
          Length = 310

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 38/39 (97%), Positives = 39/39 (100%)
 Frame = +1

Query: 1   GVEPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLGSSSH 117
           GVEPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLGSSS+
Sbjct: 272 GVEPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLGSSSN 310


Top