BLASTX nr result

ID: Coptis25_contig00019924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019924
         (797 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237351.1| uncharacterized protein LOC100306601 [Glycin...   181   2e-43
ref|NP_001236422.1| uncharacterized protein LOC100500584 [Glycin...   177   2e-42
ref|XP_002268262.1| PREDICTED: thioredoxin X, chloroplastic [Vit...   176   5e-42
ref|XP_003633059.1| PREDICTED: LOW QUALITY PROTEIN: thioredoxin ...   173   4e-41
gb|AFK48874.1| unknown [Medicago truncatula]                          171   2e-40

>ref|NP_001237351.1| uncharacterized protein LOC100306601 [Glycine max]
           gi|255629033|gb|ACU14861.1| unknown [Glycine max]
          Length = 198

 Score =  181 bits (458), Expect = 2e-43
 Identities = 101/188 (53%), Positives = 133/188 (70%), Gaps = 10/188 (5%)
 Frame = -1

Query: 713 MSIIPTSFHSSMLSIPTTP-STYTLHKPHYTSSIFKTNHSL-LPFRNQLKSR-----FQQ 555
           +S  P +  +  LS+P  P    T+     TSS     HS     R +L S      F+ 
Sbjct: 11  LSFHPENMDAMTLSLPLPPVPVCTVPASASTSSSVSLTHSWSATARQRLSSHRTRPIFRN 70

Query: 554 YPS-LQKVTSITCG--VTLIDQTQFSETVLKSDVPVLVEFVAEWCGPCRLIAPAIEWASQ 384
           Y S + K+T +TCG  VT I++TQF +TVLK++ PVLVEFVA WCGPCRLI+P++E  ++
Sbjct: 71  YSSAVPKLTVVTCGAAVTEINETQFKDTVLKANRPVLVEFVATWCGPCRLISPSMESLAK 130

Query: 383 EYKDKLKVVKIDHDSNPQLIEEYRVYGLPALILFHKGKEIGESRREGAMTKVKLKEYLDG 204
           EY+D+L VVKIDHD+NP+LIEEY+VYGLP LILF  G+E+ ESRREGA+TKVKLKEY+D 
Sbjct: 131 EYEDRLTVVKIDHDANPRLIEEYKVYGLPTLILFKNGQEVPESRREGAITKVKLKEYVDA 190

Query: 203 VLESIAVA 180
           +LESI+V+
Sbjct: 191 LLESISVS 198


>ref|NP_001236422.1| uncharacterized protein LOC100500584 [Glycine max]
           gi|255630681|gb|ACU15700.1| unknown [Glycine max]
          Length = 181

 Score =  177 bits (449), Expect = 2e-42
 Identities = 94/175 (53%), Positives = 125/175 (71%), Gaps = 7/175 (4%)
 Frame = -1

Query: 683 SMLSIPTTPSTYTLHKPHYTSSIFKTNHSLLPFRNQLKSR-----FQQYPSLQKVTSITC 519
           S+LS+P  P          +SS+  T+      R +L S      F+ + S     ++TC
Sbjct: 7   SLLSLPPVPVRTVSASASTSSSVPLTHSYSCSARQRLSSHRTRLSFRNHSSAVPKLTVTC 66

Query: 518 G--VTLIDQTQFSETVLKSDVPVLVEFVAEWCGPCRLIAPAIEWASQEYKDKLKVVKIDH 345
           G  VT I++TQF +TVLK++ PVLVEFVA WCGPCRLI+ A+E  ++EY+D+L VVKIDH
Sbjct: 67  GAAVTEINETQFKDTVLKANRPVLVEFVATWCGPCRLISSAMESLAKEYEDRLTVVKIDH 126

Query: 344 DSNPQLIEEYRVYGLPALILFHKGKEIGESRREGAMTKVKLKEYLDGVLESIAVA 180
           D+NPQLIEEY+VYGLP LILF  G+E+ ESRREGA+TK+KLKEY+D +LESI+V+
Sbjct: 127 DANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYVDALLESISVS 181


>ref|XP_002268262.1| PREDICTED: thioredoxin X, chloroplastic [Vitis vinifera]
          Length = 176

 Score =  176 bits (446), Expect = 5e-42
 Identities = 97/178 (54%), Positives = 128/178 (71%), Gaps = 1/178 (0%)
 Frame = -1

Query: 710 SIIPTSFHSSMLSIPTTPSTYTLHKPHYTSSIFKTNHSLLPFRNQLKSRFQQYPSLQKVT 531
           +++  S   S+ S+P      +  K  ++S   KT  +L   R+Q K  F+  P  +   
Sbjct: 3   TMVSNSMPISVSSLPPVRVVASPRKLEFSSFTPKT--TLFGSRSQRKIGFRCSPVRR--A 58

Query: 530 SITCGV-TLIDQTQFSETVLKSDVPVLVEFVAEWCGPCRLIAPAIEWASQEYKDKLKVVK 354
           ++TCGV T I ++QFS+ VLK+D PVLVEFVA WCGPCRLI+PA+E  +QEY D+L VVK
Sbjct: 59  AVTCGVVTEIKESQFSDVVLKADEPVLVEFVATWCGPCRLISPAMEAIAQEYGDRLTVVK 118

Query: 353 IDHDSNPQLIEEYRVYGLPALILFHKGKEIGESRREGAMTKVKLKEYLDGVLESIAVA 180
           IDHD+NP+LIEEY+VYGLP LILF  G+E+ ESRREGA+TK KLKEY+D +LESI+VA
Sbjct: 119 IDHDANPRLIEEYKVYGLPTLILFKNGQEVPESRREGAITKGKLKEYVDALLESISVA 176


>ref|XP_003633059.1| PREDICTED: LOW QUALITY PROTEIN: thioredoxin X, chloroplastic-like
           [Vitis vinifera]
          Length = 175

 Score =  173 bits (438), Expect = 4e-41
 Identities = 97/178 (54%), Positives = 127/178 (71%), Gaps = 1/178 (0%)
 Frame = -1

Query: 710 SIIPTSFHSSMLSIPTTPSTYTLHKPHYTSSIFKTNHSLLPFRNQLKSRFQQYPSLQKVT 531
           +I+  S   S+ S+P   +  +  K  ++S   KT  +L   R+Q K  F+  P   +  
Sbjct: 3   TILSNSMPISVSSLPPVRAVPSPRKLEFSSFTPKT--TLFGSRSQRKLGFRCSP---RRA 57

Query: 530 SITCG-VTLIDQTQFSETVLKSDVPVLVEFVAEWCGPCRLIAPAIEWASQEYKDKLKVVK 354
           ++TCG VT I ++QFS+ VLK+D PVLVEFVA WCGPCRLI+ A+E  + EY D+L VVK
Sbjct: 58  AVTCGGVTEIKESQFSDVVLKADGPVLVEFVATWCGPCRLISLAMEAIAXEYGDRLTVVK 117

Query: 353 IDHDSNPQLIEEYRVYGLPALILFHKGKEIGESRREGAMTKVKLKEYLDGVLESIAVA 180
           IDHD+NPQLIEEY+VYGLP LILF  G+E+ ESRREGA+TK KLKEY+D +LESI+VA
Sbjct: 118 IDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKGKLKEYVDALLESISVA 175


>gb|AFK48874.1| unknown [Medicago truncatula]
          Length = 181

 Score =  171 bits (433), Expect = 2e-40
 Identities = 93/186 (50%), Positives = 126/186 (67%), Gaps = 9/186 (4%)
 Frame = -1

Query: 713 MSIIPTSFHSSMLSIPTTPSTYTLHKPHYTSSIFKTNHSLLPFRNQLKSRFQQYPSLQKV 534
           M  + ++  S  L++PT P          T+SI  ++   LP  ++ +  + Q  S    
Sbjct: 1   MDTVTSTSASLTLTLPTLPVRTI------TASISVSSSLPLPRSHRQQRLYSQKRSFSNS 54

Query: 533 TS---------ITCGVTLIDQTQFSETVLKSDVPVLVEFVAEWCGPCRLIAPAIEWASQE 381
           +S         ++CG+T I+++QF+ TVLKS+ PVLVEFVA WCGPCRLI PA+E  +QE
Sbjct: 55  SSSSVAVPRFTVSCGITEINESQFNVTVLKSERPVLVEFVATWCGPCRLITPAMESIAQE 114

Query: 380 YKDKLKVVKIDHDSNPQLIEEYRVYGLPALILFHKGKEIGESRREGAMTKVKLKEYLDGV 201
           Y D+L VVKIDHD+NPQLIEEY+VYGLP LILF  G+E   SR+EGA+TKVKLK++LD +
Sbjct: 115 YADRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGEEFPGSRKEGAITKVKLKQHLDAL 174

Query: 200 LESIAV 183
           LESI+V
Sbjct: 175 LESISV 180


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