BLASTX nr result

ID: Coptis25_contig00019917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019917
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632265.1| PREDICTED: uncharacterized protein LOC100854...   252   4e-65
ref|XP_002533606.1| hypothetical protein RCOM_1180720 [Ricinus c...   243   3e-62
ref|XP_002313654.1| predicted protein [Populus trichocarpa] gi|2...   229   3e-58
ref|XP_004139470.1| PREDICTED: uncharacterized protein LOC101222...   223   2e-56
ref|XP_004139471.1| PREDICTED: uncharacterized protein LOC101222...   210   2e-52

>ref|XP_003632265.1| PREDICTED: uncharacterized protein LOC100854742 [Vitis vinifera]
          Length = 219

 Score =  252 bits (644), Expect = 4e-65
 Identities = 123/211 (58%), Positives = 158/211 (74%), Gaps = 4/211 (1%)
 Frame = +3

Query: 3   KSQKLYFRTTLGLLQVSSIDYKAKTLTISH-SYCSSSLHFISPSLLSAGFPSPPQSNSVL 179
           KSQKLYFRTTLGL  +SSIDY +K LTISH + CSSSL F+SPSLLSAGFP+P   NS+L
Sbjct: 5   KSQKLYFRTTLGLFPISSIDYTSKILTISHPASCSSSLQFVSPSLLSAGFPTPTP-NSLL 63

Query: 180 FFNCSSQKALMSPFLQNCTT-FHGCKALSEFKEQKQNEPSTCWMINDTEKVETDFDPKDL 356
            FNCS Q+  +S F++NCT  FHGC+  S+  E++    S+C +I+D EK+   F+PK+L
Sbjct: 64  LFNCSDQRHPISLFIRNCTKRFHGCRVSSQVHEKELGLASSCLLIDDLEKLNMGFEPKEL 123

Query: 357 NCSHYKRVYRDSASSFSE--GYKLGTIISFDIPDHVPNVCDECNKAKGNCGVGLRCICHP 530
           NCSHY RVYRDS+       G++LGT ISF++P HVP++C EC K+ GNCGVGLRCICHP
Sbjct: 124 NCSHYSRVYRDSSGDDDGDGGFELGTRISFEVPGHVPDICKECEKSNGNCGVGLRCICHP 183

Query: 531 KDCRDKVISRGVSLEPFGNIFLSLLACLVMI 623
           K+C+DKV+S G S  P G I  SL++  +M+
Sbjct: 184 KECKDKVLSMGGSKSPLGTILFSLISFTMML 214


>ref|XP_002533606.1| hypothetical protein RCOM_1180720 [Ricinus communis]
           gi|223526507|gb|EEF28775.1| hypothetical protein
           RCOM_1180720 [Ricinus communis]
          Length = 277

 Score =  243 bits (619), Expect = 3e-62
 Identities = 112/214 (52%), Positives = 149/214 (69%), Gaps = 2/214 (0%)
 Frame = +3

Query: 6   SQKLYFRTTLGLLQVSSIDYKAKTLTISHSYCSSSLHFISPSLLSAGFPSPPQSNSVLFF 185
           SQKL+FRT+LGL  VSSIDY  KT+TIS   C SS  F+SPSLLSAGFP+ P  NS++ F
Sbjct: 63  SQKLFFRTSLGLFPVSSIDYATKTITISQPSCPSSQQFVSPSLLSAGFPTSPMLNSLILF 122

Query: 186 NCSSQKALMSPFLQNCTTFHGCKALSEFKEQKQNEPSTCWMINDTEKVETDFDPKDLNCS 365
           NCS++   ++    NC  F  C + S+   Q+   P +C ++N+ +K++  F PKDLNCS
Sbjct: 123 NCSNKNYPITSSFSNCKNFKACSSSSDTPHQELKIPYSCLLVNNLDKLDKSFHPKDLNCS 182

Query: 366 HYKRVYRDSAS--SFSEGYKLGTIISFDIPDHVPNVCDECNKAKGNCGVGLRCICHPKDC 539
           HY R+YR S +    S GY+LGT ISFDIPDHVPN+CDEC K  GNCGVGL+CICHPK+C
Sbjct: 183 HYSRIYRSSLNDDDNSIGYELGTRISFDIPDHVPNICDECEKPNGNCGVGLKCICHPKEC 242

Query: 540 RDKVISRGVSLEPFGNIFLSLLACLVMIISLKGC 641
           ++KVIS   S++P  NI +  +  L++++    C
Sbjct: 243 KNKVISTAGSIKPSANIVIFSMLPLIVLVFFTSC 276


>ref|XP_002313654.1| predicted protein [Populus trichocarpa] gi|222850062|gb|EEE87609.1|
           predicted protein [Populus trichocarpa]
          Length = 266

 Score =  229 bits (584), Expect = 3e-58
 Identities = 111/204 (54%), Positives = 145/204 (71%), Gaps = 1/204 (0%)
 Frame = +3

Query: 3   KSQKLYFRTTLGLLQVSSIDYKAKTLTISHSYCSSSLHFISPSLLSAGFPSPPQSNSVLF 182
           +SQKLYFRT+LGL  VSSI+Y +KTLTISHS CSSS H+ISPSLLSAGFP+PPQ NS+L 
Sbjct: 63  RSQKLYFRTSLGLFPVSSINYASKTLTISHSSCSSSRHYISPSLLSAGFPTPPQPNSLLL 122

Query: 183 FNCSSQKALMSPFLQNCTTFHGCKALSEFKEQKQNEPSTCWMINDTEKVETDFDPKDLNC 362
           FNC +  + M   + NC+  + C A ++ + QK   P +C ++   E ++  F PKDLNC
Sbjct: 123 FNCLNSNSPMPSSMLNCSHLNPCAASAKTQRQKLEAPHSCSLVG-LENLDKAFHPKDLNC 181

Query: 363 SHYKRVYRDSASSFS-EGYKLGTIISFDIPDHVPNVCDECNKAKGNCGVGLRCICHPKDC 539
           SHY +VYR S      +GY+LGT ISFDIPDHVP++C+EC K+ GNCGVGL+CICHP+DC
Sbjct: 182 SHYSQVYRRSLDDEDYKGYELGTRISFDIPDHVPDICNECQKSNGNCGVGLKCICHPQDC 241

Query: 540 RDKVISRGVSLEPFGNIFLSLLAC 611
              + S  +SL  +   +  L +C
Sbjct: 242 SKHISSSVISLNVW---YFGLFSC 262


>ref|XP_004139470.1| PREDICTED: uncharacterized protein LOC101222629 isoform 1 [Cucumis
           sativus] gi|449529690|ref|XP_004171831.1| PREDICTED:
           uncharacterized LOC101222629 [Cucumis sativus]
          Length = 269

 Score =  223 bits (568), Expect = 2e-56
 Identities = 113/210 (53%), Positives = 144/210 (68%), Gaps = 2/210 (0%)
 Frame = +3

Query: 3   KSQKLYFRTTLGLLQVSSIDYKAKTLTISHSYCSSSLHFISPSLLSAGFPSPPQS-NSVL 179
           +SQKLYFRT++GL  +S IDY  KTL IS+ + SSS HF+SPSLLS+G PSPP   NS+L
Sbjct: 61  RSQKLYFRTSIGLFPISKIDYTTKTLIISN-FLSSSHHFVSPSLLSSGLPSPPHLINSLL 119

Query: 180 FFNCSSQKALMSPFLQNCTTFHGCKALSEFKEQKQNEPSTCWMINDTEKVETDFDPKDLN 359
            FNCS+    ++   QNC  F   +AL    E++ ++ S+C +  D  K++  F P DL 
Sbjct: 120 LFNCSNPTKPITESAQNCPKF---EALQNQDEEQTSQKSSCLIFEDLGKLQESFHPNDLK 176

Query: 360 CSHYKRVYRDSAS-SFSEGYKLGTIISFDIPDHVPNVCDECNKAKGNCGVGLRCICHPKD 536
           CSH++RVYR+S+      GYKLGT ISFDIPDHVPN C EC K  G+CGVGLRCICH  D
Sbjct: 177 CSHFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNPCHECEKPDGHCGVGLRCICHVLD 236

Query: 537 CRDKVISRGVSLEPFGNIFLSLLACLVMII 626
           C+DKV S+G  + P G   +SLLA  V+II
Sbjct: 237 CKDKVFSKGGIVRPCGKFLISLLAVFVVII 266


>ref|XP_004139471.1| PREDICTED: uncharacterized protein LOC101222629 isoform 2 [Cucumis
           sativus]
          Length = 253

 Score =  210 bits (534), Expect = 2e-52
 Identities = 105/194 (54%), Positives = 134/194 (69%), Gaps = 2/194 (1%)
 Frame = +3

Query: 3   KSQKLYFRTTLGLLQVSSIDYKAKTLTISHSYCSSSLHFISPSLLSAGFPSPPQS-NSVL 179
           +SQKLYFRT++GL  +S IDY  KTL IS+ + SSS HF+SPSLLS+G PSPP   NS+L
Sbjct: 61  RSQKLYFRTSIGLFPISKIDYTTKTLIISN-FLSSSHHFVSPSLLSSGLPSPPHLINSLL 119

Query: 180 FFNCSSQKALMSPFLQNCTTFHGCKALSEFKEQKQNEPSTCWMINDTEKVETDFDPKDLN 359
            FNCS+    ++   QNC  F   +AL    E++ ++ S+C +  D  K++  F P DL 
Sbjct: 120 LFNCSNPTKPITESAQNCPKF---EALQNQDEEQTSQKSSCLIFEDLGKLQESFHPNDLK 176

Query: 360 CSHYKRVYRDSAS-SFSEGYKLGTIISFDIPDHVPNVCDECNKAKGNCGVGLRCICHPKD 536
           CSH++RVYR+S+      GYKLGT ISFDIPDHVPN C EC K  G+CGVGLRCICH  D
Sbjct: 177 CSHFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNPCHECEKPDGHCGVGLRCICHVLD 236

Query: 537 CRDKVISRGVSLEP 578
           C+DKV S+G  + P
Sbjct: 237 CKDKVFSKGGIVRP 250


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