BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019916
         (1554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632309.1| PREDICTED: F-box/kelch-repeat protein SKIP30...   546   e-153
ref|XP_002524761.1| Protein AFR, putative [Ricinus communis] gi|...   540   e-151
ref|XP_003536597.1| PREDICTED: F-box/kelch-repeat protein SKIP30...   535   e-149
ref|XP_002307595.1| f-box family protein [Populus trichocarpa] g...   535   e-149
gb|ACU23482.1| unknown [Glycine max]                                  533   e-149

>ref|XP_003632309.1| PREDICTED: F-box/kelch-repeat protein SKIP30-like isoform 1 [Vitis
            vinifera] gi|359479635|ref|XP_003632310.1| PREDICTED:
            F-box/kelch-repeat protein SKIP30-like isoform 2 [Vitis
            vinifera] gi|359479637|ref|XP_003632311.1| PREDICTED:
            F-box/kelch-repeat protein SKIP30-like isoform 3 [Vitis
            vinifera]
          Length = 345

 Score =  546 bits (1408), Expect = e-153
 Identities = 259/347 (74%), Positives = 300/347 (86%)
 Frame = +2

Query: 230  MSGLIEGLPDAVALQCLARVPFYAHPKLQLVCHSWREAIRSPELFRTRQELGASEELLCV 409
            MSGLIEGLPDAVAL+CLA VPFY HP+L+LV  SWR+AIR PELF+ RQE+G+SE+LLCV
Sbjct: 1    MSGLIEGLPDAVALRCLAWVPFYLHPRLELVSRSWRDAIRGPELFKARQEVGSSEDLLCV 60

Query: 410  SAFEPENSWQLYNPVKDLWMTLPVLPSQIRRLAHFGVVSIAGKLFVLGGGSDAVDPLTGD 589
             AF+PEN WQLY+P KDLW++LPVLPS+IR LAHFG VS AGKLFVLGGGSDAVDPLTGD
Sbjct: 61   CAFDPENLWQLYDPRKDLWISLPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD 120

Query: 590  NDGIFATDEVWSYDPVLRCWAQRASMLVPRAMFACCVLDGKIIVAGGFTNFRKSISKAEI 769
             DG FAT+EVWSYDP++R WA RA MLVPRAMFACCVLDGKI+VAGGFT+ RKSIS+AEI
Sbjct: 121  QDGSFATNEVWSYDPIIRQWAPRAPMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEI 180

Query: 770  YDPEKDVWIALQDLLLTHNSACTGVVIGGKVHVLHKGLSTVQVLDTSVLRWAIEDYGWLQ 949
            YDPEKD W+++ DL  THNSAC+GVV+ GKVHVLHKGL+TVQ+LD     W +EDYGWLQ
Sbjct: 181  YDPEKDAWVSIPDLHRTHNSACSGVVLDGKVHVLHKGLTTVQILDKVGPGWRVEDYGWLQ 240

Query: 950  GPMAVVQGELYVLSHGVIFKQDKEQRKRKMVTTASDFQTRIGFAMIGLGSELYMIGGVIG 1129
            GPMA+VQG LYV+SHG+IFKQ++E   +KMV +AS+F+ RIGFAM GL  E+Y+IGGVIG
Sbjct: 241  GPMAIVQGALYVMSHGIIFKQERE--VKKMVVSASEFRRRIGFAMTGLRDEIYVIGGVIG 298

Query: 1130 PGRWNVDIKPLFDVDVLTVRSERPSWRQVKPMTLCHGTILGCTVLRI 1270
            P RWN DIKPL DVDVLT+ SERP+WRQV PM+ C GTI GCT LRI
Sbjct: 299  PDRWNWDIKPLSDVDVLTIGSERPAWRQVSPMSQCRGTIFGCTQLRI 345


>ref|XP_002524761.1| Protein AFR, putative [Ricinus communis] gi|223535945|gb|EEF37604.1|
            Protein AFR, putative [Ricinus communis]
          Length = 345

 Score =  540 bits (1392), Expect = e-151
 Identities = 256/347 (73%), Positives = 297/347 (85%)
 Frame = +2

Query: 230  MSGLIEGLPDAVALQCLARVPFYAHPKLQLVCHSWREAIRSPELFRTRQELGASEELLCV 409
            MS LIEGLPDA+A++C+ARVPFY HPKL+LV HSWR AIRSPELF+ RQE+G++E+LLCV
Sbjct: 1    MSELIEGLPDAIAIRCIARVPFYLHPKLELVSHSWRSAIRSPELFKARQEVGSAEDLLCV 60

Query: 410  SAFEPENSWQLYNPVKDLWMTLPVLPSQIRRLAHFGVVSIAGKLFVLGGGSDAVDPLTGD 589
             AFEPEN WQLY+P++DLW+TLPVLPS+IR LAHFGVVS AGKL+VLGGGSDAVDPLTGD
Sbjct: 61   CAFEPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLYVLGGGSDAVDPLTGD 120

Query: 590  NDGIFATDEVWSYDPVLRCWAQRASMLVPRAMFACCVLDGKIIVAGGFTNFRKSISKAEI 769
             DG FAT+EVWSYDPV+R WA RASMLVPRAMFACCVL GKI+VAGGFT+ RKSIS+AE+
Sbjct: 121  QDGNFATNEVWSYDPVIRQWALRASMLVPRAMFACCVLKGKIVVAGGFTSCRKSISQAEM 180

Query: 770  YDPEKDVWIALQDLLLTHNSACTGVVIGGKVHVLHKGLSTVQVLDTSVLRWAIEDYGWLQ 949
            YDPEKDVWI + DL  THNSAC+G+VIGGKVH+LHKGLS VQVLD     W +EDY WLQ
Sbjct: 181  YDPEKDVWIPIPDLHRTHNSACSGIVIGGKVHILHKGLSAVQVLDNVGAGWTVEDYNWLQ 240

Query: 950  GPMAVVQGELYVLSHGVIFKQDKEQRKRKMVTTASDFQTRIGFAMIGLGSELYMIGGVIG 1129
            GPMAVV G LYV+SHG+I KQ  E + RK+V +AS+F+ RIGFAM GLG ++Y+IGGVIG
Sbjct: 241  GPMAVVHGALYVMSHGLICKQ--EGKVRKVVVSASEFRRRIGFAMTGLGDDIYVIGGVIG 298

Query: 1130 PGRWNVDIKPLFDVDVLTVRSERPSWRQVKPMTLCHGTILGCTVLRI 1270
            P RWN DIKP+ DVD+L V  ERP+WRQ  PM+ C GTILGC  LRI
Sbjct: 299  PDRWNWDIKPMSDVDILAVGGERPTWRQAAPMSRCRGTILGCAQLRI 345


>ref|XP_003536597.1| PREDICTED: F-box/kelch-repeat protein SKIP30-like isoform 1 [Glycine
            max] gi|356536141|ref|XP_003536598.1| PREDICTED:
            F-box/kelch-repeat protein SKIP30-like isoform 2 [Glycine
            max] gi|356536143|ref|XP_003536599.1| PREDICTED:
            F-box/kelch-repeat protein SKIP30-like isoform 3 [Glycine
            max]
          Length = 344

 Score =  535 bits (1378), Expect = e-149
 Identities = 256/347 (73%), Positives = 299/347 (86%)
 Frame = +2

Query: 230  MSGLIEGLPDAVALQCLARVPFYAHPKLQLVCHSWREAIRSPELFRTRQELGASEELLCV 409
            MSGLIEGLPDAVA++CLA VPFY HPKL+LV  +WR  +R PELF+ RQELG+SE+LLCV
Sbjct: 1    MSGLIEGLPDAVAIRCLAWVPFYLHPKLELVSRAWRAVVRGPELFKARQELGSSEDLLCV 60

Query: 410  SAFEPENSWQLYNPVKDLWMTLPVLPSQIRRLAHFGVVSIAGKLFVLGGGSDAVDPLTGD 589
             AFEPEN WQLY+P +DLW+TLPVLPS+IR L+HFG VS AGKLFV+GGGSDAVDPLTGD
Sbjct: 61   CAFEPENLWQLYDPQRDLWITLPVLPSRIRHLSHFGAVSTAGKLFVIGGGSDAVDPLTGD 120

Query: 590  NDGIFATDEVWSYDPVLRCWAQRASMLVPRAMFACCVLDGKIIVAGGFTNFRKSISKAEI 769
             DG FAT+EVWSYDPV+R W+ RA+MLVPR+MFACCV++GKI+VAGGFT+ RKSIS+AEI
Sbjct: 121  QDGCFATNEVWSYDPVVRQWSPRAAMLVPRSMFACCVMNGKIVVAGGFTSCRKSISQAEI 180

Query: 770  YDPEKDVWIALQDLLLTHNSACTGVVIGGKVHVLHKGLSTVQVLDTSVLRWAIEDYGWLQ 949
            YDPEKDVWI + DL  THNSAC+GVVIGGKVHVLHK +STVQVLD +  +W +E+YGWL 
Sbjct: 181  YDPEKDVWIPMPDLHRTHNSACSGVVIGGKVHVLHKDMSTVQVLDNAG-QWTVEEYGWLH 239

Query: 950  GPMAVVQGELYVLSHGVIFKQDKEQRKRKMVTTASDFQTRIGFAMIGLGSELYMIGGVIG 1129
            G MAV++  LYV+SHG+I KQDK  + RK+V +AS+F+ RIGFAMIGLG ELY+IGGVIG
Sbjct: 240  GQMAVIRDALYVISHGLIIKQDK--KMRKVVGSASEFRRRIGFAMIGLGDELYVIGGVIG 297

Query: 1130 PGRWNVDIKPLFDVDVLTVRSERPSWRQVKPMTLCHGTILGCTVLRI 1270
            P RWN DIKPL DVDVLT+ SERP+WRQ  PMT C GTILGCT LRI
Sbjct: 298  PDRWNWDIKPLSDVDVLTLASERPTWRQAAPMTRCGGTILGCTQLRI 344


>ref|XP_002307595.1| f-box family protein [Populus trichocarpa]
            gi|118482816|gb|ABK93324.1| unknown [Populus trichocarpa]
            gi|222857044|gb|EEE94591.1| f-box family protein [Populus
            trichocarpa]
          Length = 345

 Score =  535 bits (1378), Expect = e-149
 Identities = 255/347 (73%), Positives = 297/347 (85%)
 Frame = +2

Query: 230  MSGLIEGLPDAVALQCLARVPFYAHPKLQLVCHSWREAIRSPELFRTRQELGASEELLCV 409
            MS LIEGLPDAVA++C+ARVPFY HPKL+LV  SWR  +RSPELF+ RQE+G++E+LLCV
Sbjct: 1    MSELIEGLPDAVAIRCIARVPFYLHPKLELVSRSWRAVVRSPELFKARQEVGSAEDLLCV 60

Query: 410  SAFEPENSWQLYNPVKDLWMTLPVLPSQIRRLAHFGVVSIAGKLFVLGGGSDAVDPLTGD 589
             AF+PEN WQLY+P +DLW+TLPVLPS+IR LAHFGVVS AGKLFVLGGGSDAVDPLTGD
Sbjct: 61   CAFDPENLWQLYDPHRDLWITLPVLPSKIRHLAHFGVVSSAGKLFVLGGGSDAVDPLTGD 120

Query: 590  NDGIFATDEVWSYDPVLRCWAQRASMLVPRAMFACCVLDGKIIVAGGFTNFRKSISKAEI 769
             DG FAT+EVWSYDPVLR WA RASMLVPRAMFAC  L+GKI+VAGGFT+ RKSIS+AE+
Sbjct: 121  QDGSFATNEVWSYDPVLRQWAARASMLVPRAMFACGTLNGKIVVAGGFTSCRKSISQAEM 180

Query: 770  YDPEKDVWIALQDLLLTHNSACTGVVIGGKVHVLHKGLSTVQVLDTSVLRWAIEDYGWLQ 949
            YDPEKDVWI + DL  THNS C+GVVIGGK+HVLH+GLSTVQVLD     W +EDYGWLQ
Sbjct: 181  YDPEKDVWIPIPDLHRTHNSTCSGVVIGGKLHVLHRGLSTVQVLDNVGSGWTVEDYGWLQ 240

Query: 950  GPMAVVQGELYVLSHGVIFKQDKEQRKRKMVTTASDFQTRIGFAMIGLGSELYMIGGVIG 1129
            GPMAVV   LYV+SHG+IFKQ  E + RK+V +AS+F+ RIGFAM+GLG ++Y+IGGVIG
Sbjct: 241  GPMAVVHDALYVMSHGLIFKQ--EGKTRKVVVSASEFRKRIGFAMMGLGDDIYVIGGVIG 298

Query: 1130 PGRWNVDIKPLFDVDVLTVRSERPSWRQVKPMTLCHGTILGCTVLRI 1270
            P RWN DI+P+ DVD+LTV  +RP+WRQ  PMT C GTILGCT LRI
Sbjct: 299  PDRWNWDIRPMSDVDILTVGGDRPTWRQATPMTRCRGTILGCTQLRI 345


>gb|ACU23482.1| unknown [Glycine max]
          Length = 344

 Score =  533 bits (1374), Expect = e-149
 Identities = 255/347 (73%), Positives = 298/347 (85%)
 Frame = +2

Query: 230  MSGLIEGLPDAVALQCLARVPFYAHPKLQLVCHSWREAIRSPELFRTRQELGASEELLCV 409
            MSGLIEGLPDAVA++CLA VPFY HPKL+LV  +WR  +R PELF+ RQELG+SE+LLCV
Sbjct: 1    MSGLIEGLPDAVAIRCLAWVPFYLHPKLELVSRAWRAVVRGPELFKARQELGSSEDLLCV 60

Query: 410  SAFEPENSWQLYNPVKDLWMTLPVLPSQIRRLAHFGVVSIAGKLFVLGGGSDAVDPLTGD 589
             AFEPEN WQLY+P +DLW+TLPVLPS+IR L+HFG VS AGKLFV+GGGSDAVDPLTGD
Sbjct: 61   CAFEPENLWQLYDPQRDLWITLPVLPSRIRHLSHFGAVSTAGKLFVIGGGSDAVDPLTGD 120

Query: 590  NDGIFATDEVWSYDPVLRCWAQRASMLVPRAMFACCVLDGKIIVAGGFTNFRKSISKAEI 769
             DG FAT+EVWSYDPV+R W+ RA+MLVPR+MFACCV++GKI+VAGGFT+ RKSIS+AEI
Sbjct: 121  QDGCFATNEVWSYDPVVRQWSPRAAMLVPRSMFACCVMNGKIVVAGGFTSCRKSISQAEI 180

Query: 770  YDPEKDVWIALQDLLLTHNSACTGVVIGGKVHVLHKGLSTVQVLDTSVLRWAIEDYGWLQ 949
            YDPEKDVWI + DL  THNSAC+GVVIGGKVHVLHK +STVQVLD +  +W +E+YGWL 
Sbjct: 181  YDPEKDVWIPMPDLHRTHNSACSGVVIGGKVHVLHKDMSTVQVLDNAG-QWTVEEYGWLH 239

Query: 950  GPMAVVQGELYVLSHGVIFKQDKEQRKRKMVTTASDFQTRIGFAMIGLGSELYMIGGVIG 1129
            G MAV++  LYV+SHG+I KQDK  + RK+V +AS+F+ RIGFAMIGLG ELY+IGGVIG
Sbjct: 240  GQMAVIRDALYVISHGLIIKQDK--KMRKVVGSASEFRRRIGFAMIGLGDELYVIGGVIG 297

Query: 1130 PGRWNVDIKPLFDVDVLTVRSERPSWRQVKPMTLCHGTILGCTVLRI 1270
            P RWN DIKPL DVDVLT+ SERP+WRQ  PMT C GTI GCT LRI
Sbjct: 298  PDRWNWDIKPLSDVDVLTLASERPTWRQAAPMTRCGGTIFGCTQLRI 344