BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019914
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAZ04048.1| photosystem II protein I [Ranunculus macranthus]        93   3e-17
ref|YP_002720022.1| photosystem II protein I [Nicotiana tabacum]       88   6e-16
gb|AFA27632.1| photosystem II protein I, partial [Cyperus altern...    86   4e-15
ref|XP_003605606.1| Photosystem II reaction center protein K [Me...    86   4e-15
ref|XP_003620833.1| Photosystem II reaction center protein K [Me...    85   5e-15

>gb|AAZ04048.1| photosystem II protein I [Ranunculus macranthus]
          Length = 53

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/53 (86%), Positives = 48/53 (90%)
 Frame = +2

Query: 83  IIYSLFYQK*SYLGDFVMLTLKLFVYTVVIFFVSLFIFGFLSNDTGRNPGREE 241
           +IYSLF +   YLGDFVMLTLKLFVYTVVIFFVSLFIFGFLSND GRNPGREE
Sbjct: 1   MIYSLFTKNDLYLGDFVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 53


>ref|YP_002720022.1| photosystem II protein I [Nicotiana tabacum]
          Length = 51

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 44/52 (84%), Positives = 49/52 (94%)
 Frame = +2

Query: 86  IYSLFYQK*SYLGDFVMLTLKLFVYTVVIFFVSLFIFGFLSNDTGRNPGREE 241
           +YSLF++K ++LGD VMLTLKLFVYTVVIFFVSLFIFGFLSND GRNPGREE
Sbjct: 1   MYSLFFKK-NHLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 51


>gb|AFA27632.1| photosystem II protein I, partial [Cyperus alternifolius]
          Length = 52

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 44/53 (83%), Positives = 47/53 (88%)
 Frame = +2

Query: 83  IIYSLFYQK*SYLGDFVMLTLKLFVYTVVIFFVSLFIFGFLSNDTGRNPGREE 241
           +IYSL  +K   LGDF+MLTLKLFVYTVVIFFVSLFIFGFLSND GRNPGREE
Sbjct: 1   VIYSLKNKK-KDLGDFIMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 52


>ref|XP_003605606.1| Photosystem II reaction center protein K [Medicago truncatula]
           gi|355506661|gb|AES87803.1| Photosystem II reaction
           center protein K [Medicago truncatula]
          Length = 144

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 40/43 (93%), Positives = 42/43 (97%)
 Frame = +2

Query: 113 SYLGDFVMLTLKLFVYTVVIFFVSLFIFGFLSNDTGRNPGREE 241
           +YLGDFVMLTLKLFVYT+VIFFVSLFIFGFLSND GRNPGREE
Sbjct: 102 NYLGDFVMLTLKLFVYTIVIFFVSLFIFGFLSNDPGRNPGREE 144


>ref|XP_003620833.1| Photosystem II reaction center protein K [Medicago truncatula]
           gi|355495848|gb|AES77051.1| Photosystem II reaction
           center protein K [Medicago truncatula]
          Length = 112

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 40/42 (95%), Positives = 41/42 (97%)
 Frame = +2

Query: 116 YLGDFVMLTLKLFVYTVVIFFVSLFIFGFLSNDTGRNPGREE 241
           YLGDFVMLTLKLFVYT+VIFFVSLFIFGFLSND GRNPGREE
Sbjct: 71  YLGDFVMLTLKLFVYTIVIFFVSLFIFGFLSNDPGRNPGREE 112