BLASTX nr result

ID: Coptis25_contig00019903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019903
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607035.1| Protein kinase-like protein [Medicago trunca...    73   2e-11
ref|XP_003589436.1| Protein kinase-like protein [Medicago trunca...    71   1e-10
ref|XP_003589833.1| Protein kinase [Medicago truncatula] gi|3554...    67   1e-09
ref|XP_002327722.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_003609560.1| hypothetical protein MTR_4g118580 [Medicago ...    65   4e-09

>ref|XP_003607035.1| Protein kinase-like protein [Medicago truncatula]
           gi|355508090|gb|AES89232.1| Protein kinase-like protein
           [Medicago truncatula]
          Length = 222

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/74 (52%), Positives = 48/74 (64%)
 Frame = +3

Query: 192 KPQQQAVVGELPHTKINLISCEPMAHISDIKLIRTDTTLDLSQKAEKVWD*PISRLVFYT 371
           +P+QQA    L   K NLISC P+ HISDIKLIRTDTTLDLSQKAEK     +++   Y 
Sbjct: 85  EPKQQATRQTLSLKKSNLISCGPLVHISDIKLIRTDTTLDLSQKAEKGMLLTMNKFQIYN 144

Query: 372 RLVPLILLFQQCGT 413
           + +P      +CGT
Sbjct: 145 KALPACHTSDRCGT 158


>ref|XP_003589436.1| Protein kinase-like protein [Medicago truncatula]
           gi|357483357|ref|XP_003611965.1| Protein kinase-like
           protein [Medicago truncatula]
           gi|358344403|ref|XP_003636279.1| Protein kinase-like
           protein [Medicago truncatula]
           gi|355478484|gb|AES59687.1| Protein kinase-like protein
           [Medicago truncatula] gi|355502214|gb|AES83417.1|
           Protein kinase-like protein [Medicago truncatula]
           gi|355513300|gb|AES94923.1| Protein kinase-like protein
           [Medicago truncatula]
          Length = 85

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 43/82 (52%), Positives = 48/82 (58%)
 Frame = +3

Query: 87  CHTRISKLHFQREIFH*FGRASQALAAVQRMGDS*KPQQQAVVGELPHTKINLISCEPMA 266
           C +   KL     +FH      Q L +     D  K QQQA     P  K NLISC+P+ 
Sbjct: 3   CESNRYKLFSLCSVFHCTQTLYQNLYSSD--SDKQKTQQQATKAASPPQKSNLISCDPLD 60

Query: 267 HISDIKLIRTDTTLDLSQKAEK 332
           HISDIKLIRTDTTLDLSQKAEK
Sbjct: 61  HISDIKLIRTDTTLDLSQKAEK 82


>ref|XP_003589833.1| Protein kinase [Medicago truncatula] gi|355478881|gb|AES60084.1|
           Protein kinase [Medicago truncatula]
          Length = 188

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 38/66 (57%), Positives = 48/66 (72%), Gaps = 2/66 (3%)
 Frame = +3

Query: 141 GRASQALAAVQRMGDS*KPQQQAVVGEL--PHTKINLISCEPMAHISDIKLIRTDTTLDL 314
           G   QA A VQ  G++    ++A++ ++  P  K NLISCEP+ H+SDIKLIRTDTTLDL
Sbjct: 114 GGVRQANAIVQHTGNT----REALLLKMASPPRKSNLISCEPLVHVSDIKLIRTDTTLDL 169

Query: 315 SQKAEK 332
           SQKAEK
Sbjct: 170 SQKAEK 175


>ref|XP_002327722.1| predicted protein [Populus trichocarpa] gi|222836807|gb|EEE75200.1|
           predicted protein [Populus trichocarpa]
          Length = 95

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/64 (53%), Positives = 38/64 (59%)
 Frame = -3

Query: 331 FSAFWLRXXXXXXXXXXXSDM*AIGSHDIKLIFVWGSSPTTACCWGFQESPMRCTAARAW 152
           FSAFWLR           SD  A GSHDIK IF+ G S T AC WG + SP+RCT A AW
Sbjct: 21  FSAFWLRSSVVSVLISLISDTWANGSHDIKFIFLGGGSITVACYWGSRASPLRCTIALAW 80

Query: 151 LALP 140
            + P
Sbjct: 81  RSPP 84


>ref|XP_003609560.1| hypothetical protein MTR_4g118580 [Medicago truncatula]
           gi|355510615|gb|AES91757.1| hypothetical protein
           MTR_4g118580 [Medicago truncatula]
          Length = 174

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 32/44 (72%), Positives = 37/44 (84%)
 Frame = +3

Query: 201 QQAVVGELPHTKINLISCEPMAHISDIKLIRTDTTLDLSQKAEK 332
           ++A V   P  K NLISC+P++HISDIKLIRTDTTLDLSQKAEK
Sbjct: 56  EKATVMTSPPQKSNLISCDPLSHISDIKLIRTDTTLDLSQKAEK 99



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/43 (74%), Positives = 34/43 (79%)
 Frame = +3

Query: 204 QAVVGELPHTKINLISCEPMAHISDIKLIRTDTTLDLSQKAEK 332
           QA     P  K NLISC+P+ HISDIKLIRTDTTLDLSQKAEK
Sbjct: 15  QATKVTSPPQKSNLISCDPLDHISDIKLIRTDTTLDLSQKAEK 57


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