BLASTX nr result

ID: Coptis25_contig00019882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019882
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282849.2| PREDICTED: uncharacterized protein LOC100257...   164   1e-38
ref|XP_004159862.1| PREDICTED: uncharacterized LOC101220770 [Cuc...   134   3e-29
ref|XP_004146243.1| PREDICTED: uncharacterized protein LOC101220...   134   3e-29
ref|XP_002300403.1| predicted protein [Populus trichocarpa] gi|2...   125   1e-26
ref|XP_002333950.1| predicted protein [Populus trichocarpa] gi|2...   125   1e-26

>ref|XP_002282849.2| PREDICTED: uncharacterized protein LOC100257171 [Vitis vinifera]
          Length = 741

 Score =  164 bits (416), Expect = 1e-38
 Identities = 94/200 (47%), Positives = 108/200 (54%), Gaps = 6/200 (3%)
 Frame = +3

Query: 141 MDSERPHRSGTSTTPTSSDLFICFTXXXXXXXXXXXXXXXXXXXX--PGRSDKYREPTLX 314
           MDSER H + +S + T  +LFICFT                      PGR+DK REP + 
Sbjct: 1   MDSERAHHNNSSGSSTG-ELFICFTSRFSSSSSTSSSMKISSKSILSPGRTDKLREPQIS 59

Query: 315 XXXXXXXXXXXXXXIKGGHSSPMFQIGSRKRGYGFENAEPSSPKVTCIGQVRVKTKKQGX 494
                         +KGG SSPMF    +KRG  FEN EPSSPKVTCIGQVRVKTKKQG 
Sbjct: 60  LSSSLSRRLRSNGSMKGGQSSPMFPAAGKKRGCAFENPEPSSPKVTCIGQVRVKTKKQGK 119

Query: 495 XXXXXXXXXXXXXXT----TPQGGILQEKKEEECLPHRNQKWVHLPLSICEALRGFGSEF 662
                              T +GG        ECLPHRNQ+WVHLPL+ICEALR FG+EF
Sbjct: 120 KMRSRSKRRGEVSFRKLDHTAEGG--------ECLPHRNQRWVHLPLTICEALRAFGAEF 171

Query: 663 NCFLPCGGRNTCSSRDRGEK 722
           NCFLPC    T   R++ EK
Sbjct: 172 NCFLPCRSSCTSGEREKEEK 191


>ref|XP_004159862.1| PREDICTED: uncharacterized LOC101220770 [Cucumis sativus]
          Length = 781

 Score =  134 bits (336), Expect = 3e-29
 Identities = 90/232 (38%), Positives = 109/232 (46%), Gaps = 38/232 (16%)
 Frame = +3

Query: 141 MDSERPHRSGTSTTPTSS------DLFICFTXXXXXXXXXXXXXXXXXXXXPGRSDKYRE 302
           MDS+ PH   TST  TSS      +LFICFT                    PGR    RE
Sbjct: 1   MDSD-PHFRTTSTNSTSSTATPSSELFICFTSRFSSSSSSSMKISSKSILSPGRP---RE 56

Query: 303 PT-LXXXXXXXXXXXXXXXIKGGHSSPMFQIGSRKRGYGFENAEPSSPKVTCIGQVRVKT 479
           P+ +               +KGG +SPMF  G +KRG  F+N EPSSPKVTCIGQVRVKT
Sbjct: 57  PSQISLSTSLSRRLKSSGSLKGGQASPMFPTGRKKRGCAFDNPEPSSPKVTCIGQVRVKT 116

Query: 480 KKQGXXXXXXXXXXXXXXXT----------TPQGG-------------ILQEKK------ 572
           KKQG                          + QG              +L++        
Sbjct: 117 KKQGKKMRARSQKRRTNSEASFRRSESLVQSSQGNGSDQQFSSHHNHHLLRQNSNSNAGN 176

Query: 573 --EEECLPHRNQKWVHLPLSICEALRGFGSEFNCFLPCGGRNTCSSRDRGEK 722
             ++ECL HRNQ+WVHLP +ICEALR FG+E NCFLPC   ++CS      K
Sbjct: 177 GFQQECLSHRNQRWVHLPFTICEALRAFGAELNCFLPC--HSSCSGNRENNK 226


>ref|XP_004146243.1| PREDICTED: uncharacterized protein LOC101220770 [Cucumis sativus]
          Length = 779

 Score =  134 bits (336), Expect = 3e-29
 Identities = 90/232 (38%), Positives = 109/232 (46%), Gaps = 38/232 (16%)
 Frame = +3

Query: 141 MDSERPHRSGTSTTPTSS------DLFICFTXXXXXXXXXXXXXXXXXXXXPGRSDKYRE 302
           MDS+ PH   TST  TSS      +LFICFT                    PGR    RE
Sbjct: 1   MDSD-PHFRTTSTNSTSSTATPSSELFICFTSRFSSSSSSSMKISSKSILSPGRP---RE 56

Query: 303 PT-LXXXXXXXXXXXXXXXIKGGHSSPMFQIGSRKRGYGFENAEPSSPKVTCIGQVRVKT 479
           P+ +               +KGG +SPMF  G +KRG  F+N EPSSPKVTCIGQVRVKT
Sbjct: 57  PSQISLSTSLSRRLKSSGSLKGGQASPMFPTGRKKRGCAFDNPEPSSPKVTCIGQVRVKT 116

Query: 480 KKQGXXXXXXXXXXXXXXXT----------TPQGG-------------ILQEKK------ 572
           KKQG                          + QG              +L++        
Sbjct: 117 KKQGKKMRARSQKRRTNSEASFRRSESLVQSSQGNGSDQQFSSHHNHHLLRQNSNSNAGN 176

Query: 573 --EEECLPHRNQKWVHLPLSICEALRGFGSEFNCFLPCGGRNTCSSRDRGEK 722
             ++ECL HRNQ+WVHLP +ICEALR FG+E NCFLPC   ++CS      K
Sbjct: 177 GFQQECLSHRNQRWVHLPFTICEALRAFGAELNCFLPC--HSSCSGNRENNK 226


>ref|XP_002300403.1| predicted protein [Populus trichocarpa] gi|222847661|gb|EEE85208.1|
           predicted protein [Populus trichocarpa]
          Length = 730

 Score =  125 bits (313), Expect = 1e-26
 Identities = 65/139 (46%), Positives = 80/139 (57%), Gaps = 17/139 (12%)
 Frame = +3

Query: 357 IKGGHSSPMFQIGSRKRGYGFENAEPSSPKVTCIGQVRVKTKKQGXXXXXXXXXXXXXXX 536
           +KGGH+SPMF    +KRG  FEN EPSSPKVTCIGQVRVKTKKQG               
Sbjct: 34  MKGGHASPMFPTNGKKRGCAFENPEPSSPKVTCIGQVRVKTKKQGNKLRTRSEKRGEISF 93

Query: 537 TTPQGG-----------------ILQEKKEEECLPHRNQKWVHLPLSICEALRGFGSEFN 665
                                   L +++++E L  RN +WVHLP++ICEALR FG+EFN
Sbjct: 94  RRVDQNSNAFEGSNNHQDLINNQFLNQQQQQEDLSPRNPRWVHLPVTICEALRTFGAEFN 153

Query: 666 CFLPCGGRNTCSSRDRGEK 722
           CFLPC    T S +++ EK
Sbjct: 154 CFLPCRSSCTASEKEKEEK 172


>ref|XP_002333950.1| predicted protein [Populus trichocarpa] gi|222839181|gb|EEE77532.1|
           predicted protein [Populus trichocarpa]
          Length = 730

 Score =  125 bits (313), Expect = 1e-26
 Identities = 65/139 (46%), Positives = 80/139 (57%), Gaps = 17/139 (12%)
 Frame = +3

Query: 357 IKGGHSSPMFQIGSRKRGYGFENAEPSSPKVTCIGQVRVKTKKQGXXXXXXXXXXXXXXX 536
           +KGGH+SPMF    +KRG  FEN EPSSPKVTCIGQVRVKTKKQG               
Sbjct: 34  MKGGHASPMFPTNGKKRGCAFENPEPSSPKVTCIGQVRVKTKKQGNKLRTRSEKRGEISF 93

Query: 537 TTPQGG-----------------ILQEKKEEECLPHRNQKWVHLPLSICEALRGFGSEFN 665
                                   L +++++E L  RN +WVHLP++ICEALR FG+EFN
Sbjct: 94  RRVDQNSNAFEGSNNHQDLINNQFLNQQQQQEDLSPRNPRWVHLPVTICEALRTFGAEFN 153

Query: 666 CFLPCGGRNTCSSRDRGEK 722
           CFLPC    T S +++ EK
Sbjct: 154 CFLPCRSSCTASEKEKEEK 172


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